| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642318
Identifier: 148642318
GI number: 148642318
Start: 241127
End: 242032
Strand: Reverse
Name: 148642318
Synonym: Msm_0258
Alternate gene names: NA
Gene position: 242032-241127 (Counterclockwise)
Preceding gene: 148642319
Following gene: 148642317
Centisome position: 13.06
GC content: 31.35
Gene sequence:
>906_bases ATGATGATGCATATGGTTTTACAAAACTACTGTGGCAATTGCGGCAAAAGATTATCACTTAATGAAGAGTACTGTAAAGG CTGTGGAGCTAGAACAGCTTTTGTAGATGCTGGTGATGATTATATGTTTACGCTTCCAATTTACGACATCGGATTTTTTG ATTTGGATATAGACTTTTCACCTTATATTGAAAGCACCAGAAAAGATTTGAAATATGAAGTCTGTTCCTGCGGATATCTG AATTTAAAAGAAAATGACTACTGTTATCATTGCGGTGTTAAAAGAACACACAGTAAATTAAGAAGAATTTTCAAATCCCA ACCAAAACCTACATTTTCATTTACAACCGTTAGCTGTGAATGCGGGCATGTTAATTCTAAAGAAAACTTGTTTTGTGAAA TGTGTGGAAAGAAATTAGTTGAAGATGAAGAGACTCCATTAAAAGATCTTTACAGTAATTTTGAGTTTGAATGTGATTAT CCTATTTTTTGTTTTTGCGGACAGGAAAATGATGAATTCAGTCAGTTTTGCAGTAATTGCGGATTTCCGTTAGATAATTT TGAAAAAACTGATGGAAATATTCAAAAATTATGTTTTTGTTCTACATTAAATGATGTTACTGCTGATTTCTGTGTTGACT GTGGAATTGATTTAAAAAATGAAAATAAAGCTTTAATTTGTGTTTGCGGAACTAAAAATCCCATATCTGCAAAATTTTGC AGCAGCTGTGACAGACAATTGAATCCAAAACGTTTTGTTAAATCCAAATTGGTTTGTAGTTGTGGAAAAATTGTAGATTA TGATGTTGAATTTTGCCCTAATTGTGGTAAAAACATTAAAAAAGCCATGAATCGTAAAATTAAATTGTCAAATGCCGGAA GATCTATAAGAAATGTTTTCAGATAA
Upstream 100 bases:
>100_bases TGCTGTTGATTTGTGCAAGTATAGTTATAGCAGGAATATTCGTAATTCCTACAGGGATTATAGGATGGATTTTAAGAAGA ATTTATCTTTACTTGACTAA
Downstream 100 bases:
>100_bases GGTGTAGTTATGAAAGAATGTGATGTATGTGGAACTCCTAATCTTAGAGCAAATAATTACTGCACTCACTGCGGAAATAG AATAGCTATGGATAATATCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MMMHMVLQNYCGNCGKRLSLNEEYCKGCGARTAFVDAGDDYMFTLPIYDIGFFDLDIDFSPYIESTRKDLKYEVCSCGYL NLKENDYCYHCGVKRTHSKLRRIFKSQPKPTFSFTTVSCECGHVNSKENLFCEMCGKKLVEDEETPLKDLYSNFEFECDY PIFCFCGQENDEFSQFCSNCGFPLDNFEKTDGNIQKLCFCSTLNDVTADFCVDCGIDLKNENKALICVCGTKNPISAKFC SSCDRQLNPKRFVKSKLVCSCGKIVDYDVEFCPNCGKNIKKAMNRKIKLSNAGRSIRNVFR
Sequences:
>Translated_301_residues MMMHMVLQNYCGNCGKRLSLNEEYCKGCGARTAFVDAGDDYMFTLPIYDIGFFDLDIDFSPYIESTRKDLKYEVCSCGYL NLKENDYCYHCGVKRTHSKLRRIFKSQPKPTFSFTTVSCECGHVNSKENLFCEMCGKKLVEDEETPLKDLYSNFEFECDY PIFCFCGQENDEFSQFCSNCGFPLDNFEKTDGNIQKLCFCSTLNDVTADFCVDCGIDLKNENKALICVCGTKNPISAKFC SSCDRQLNPKRFVKSKLVCSCGKIVDYDVEFCPNCGKNIKKAMNRKIKLSNAGRSIRNVFR >Mature_301_residues MMMHMVLQNYCGNCGKRLSLNEEYCKGCGARTAFVDAGDDYMFTLPIYDIGFFDLDIDFSPYIESTRKDLKYEVCSCGYL NLKENDYCYHCGVKRTHSKLRRIFKSQPKPTFSFTTVSCECGHVNSKENLFCEMCGKKLVEDEETPLKDLYSNFEFECDY PIFCFCGQENDEFSQFCSNCGFPLDNFEKTDGNIQKLCFCSTLNDVTADFCVDCGIDLKNENKALICVCGTKNPISAKFC SSCDRQLNPKRFVKSKLVCSCGKIVDYDVEFCPNCGKNIKKAMNRKIKLSNAGRSIRNVFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34387; Mature: 34387
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 12.0 %Cys+Met (Translated Protein) 9.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 12.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMMHMVLQNYCGNCGKRLSLNEEYCKGCGARTAFVDAGDDYMFTLPIYDIGFFDLDIDFS CHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEEEEECCCCEEEEEEEEECCEEEEECCCC PYIESTRKDLKYEVCSCGYLNLKENDYCYHCGVKRTHSKLRRIFKSQPKPTFSFTTVSCE HHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCHHHHHHHHHHHHCCCCCCEEEEEEEEE CGHVNSKENLFCEMCGKKLVEDEETPLKDLYSNFEFECDYPIFCFCGQENDEFSQFCSNC CCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCEEECCCEEEEECCCCCHHHHHHHHC GFPLDNFEKTDGNIQKLCFCSTLNDVTADFCVDCGIDLKNENKALICVCGTKNPISAKFC CCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEECCCCCEEEEEECCCCCCCHHHH SSCDRQLNPKRFVKSKLVCSCGKIVDYDVEFCPNCGKNIKKAMNRKIKLSNAGRSIRNVF HHHHHCCCHHHHHHHHHHHHCCCEEECCHHHCCCCCHHHHHHHCCEEEECCCCHHHHHHC R C >Mature Secondary Structure MMMHMVLQNYCGNCGKRLSLNEEYCKGCGARTAFVDAGDDYMFTLPIYDIGFFDLDIDFS CHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEEEEECCCCEEEEEEEEECCEEEEECCCC PYIESTRKDLKYEVCSCGYLNLKENDYCYHCGVKRTHSKLRRIFKSQPKPTFSFTTVSCE HHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCHHHHHHHHHHHHCCCCCCEEEEEEEEE CGHVNSKENLFCEMCGKKLVEDEETPLKDLYSNFEFECDYPIFCFCGQENDEFSQFCSNC CCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCEEECCCEEEEECCCCCHHHHHHHHC GFPLDNFEKTDGNIQKLCFCSTLNDVTADFCVDCGIDLKNENKALICVCGTKNPISAKFC CCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEECCCCCEEEEEECCCCCCCHHHH SSCDRQLNPKRFVKSKLVCSCGKIVDYDVEFCPNCGKNIKKAMNRKIKLSNAGRSIRNVF HHHHHCCCHHHHHHHHHHHHCCCEEECCHHHCCCCCHHHHHHHCCEEEECCCCHHHHHHC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA