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The map label for this gene is 148642227

Identifier: 148642227

GI number: 148642227

Start: 159703

End: 160323

Strand: Reverse

Name: 148642227

Synonym: Msm_0167

Alternate gene names: NA

Gene position: 160323-159703 (Counterclockwise)

Preceding gene: 148642228

Following gene: 148642226

Centisome position: 8.65

GC content: 28.18

Gene sequence:

>621_bases
ATGAAATATTTAAGGATTTTAATTGAGGGGTGGACTGCTTCATTTAGATATCCTGCATTTATAAGTGGATTTCAGCCAAC
ATTGCCAGTTCCTCCTTTAAGTACAATTTATGGATTATTGTCTGCTGCTAAAGGGGAGTTAGTTACTCCTGATGAAACAA
ATGTTGGTTTTGTTTTTGATTATGATGCAAAAGCAGTAGATTTAGAGACAATTTATGAATTAAAAGGATTAAAAGGAAAC
AAATCTAATGTAGCTAAAAGAGAGTTTCTATTTAATCCTAGTTTATATTTATATACTGATGATTTGAAATTTAAAAAATA
TTTTAAAAATCCAACATATCCAATTTTACTTGGAAGATCTTCAGATTTAGCTATTATTAGTGAAATTAAAGAAATTAAGA
TGGAAAAAAAGAATAATGTTAAGTTAGGTAAAACAATTTTACCATTTGGTATTGAAGGTGCATTTGGAATTATTCAAGCA
TTACCTACACATTTTTCAGATTCAATTCCTAGAAAAGCAATTGGAACCAAACCATATCTATTGATGAATCAATTTTTTGA
TTATTCTGGTGATTGTTATTTTGATTCTGAGTTAAATTGGGGAGTTTGGATTCATAAGTAG

Upstream 100 bases:

>100_bases
TAAAATAATTGAATATGCTAAAAATAAAGAAAATGTTCATATTGGAACTATTAAAGAGATAACTGATAAATTTTCTGATG
AAATTCCTAAGTTGATTTAA

Downstream 100 bases:

>100_bases
GTTATATTATGGTTATTTTAGCTAAACCTAATGAAACATTAATGGAGCATACGGAAAATACTTTAAAAGTTTTTAAATGT
ATTAAAGAATGTTATCCTGA

Product: putative DNA repair protein

Products: NA

Alternate protein names: CRISPR-Associated Family; CRISPR-Associated Tneap Subtype; DNA Repair Protein

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MKYLRILIEGWTASFRYPAFISGFQPTLPVPPLSTIYGLLSAAKGELVTPDETNVGFVFDYDAKAVDLETIYELKGLKGN
KSNVAKREFLFNPSLYLYTDDLKFKKYFKNPTYPILLGRSSDLAIISEIKEIKMEKKNNVKLGKTILPFGIEGAFGIIQA
LPTHFSDSIPRKAIGTKPYLLMNQFFDYSGDCYFDSELNWGVWIHK

Sequences:

>Translated_206_residues
MKYLRILIEGWTASFRYPAFISGFQPTLPVPPLSTIYGLLSAAKGELVTPDETNVGFVFDYDAKAVDLETIYELKGLKGN
KSNVAKREFLFNPSLYLYTDDLKFKKYFKNPTYPILLGRSSDLAIISEIKEIKMEKKNNVKLGKTILPFGIEGAFGIIQA
LPTHFSDSIPRKAIGTKPYLLMNQFFDYSGDCYFDSELNWGVWIHK
>Mature_206_residues
MKYLRILIEGWTASFRYPAFISGFQPTLPVPPLSTIYGLLSAAKGELVTPDETNVGFVFDYDAKAVDLETIYELKGLKGN
KSNVAKREFLFNPSLYLYTDDLKFKKYFKNPTYPILLGRSSDLAIISEIKEIKMEKKNNVKLGKTILPFGIEGAFGIIQA
LPTHFSDSIPRKAIGTKPYLLMNQFFDYSGDCYFDSELNWGVWIHK

Specific function: Unknown

COG id: COG1688

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23419; Mature: 23419

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLRILIEGWTASFRYPAFISGFQPTLPVPPLSTIYGLLSAAKGELVTPDETNVGFVFD
CCEEEEEEECCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCEEEEEE
YDAKAVDLETIYELKGLKGNKSNVAKREFLFNPSLYLYTDDLKFKKYFKNPTYPILLGRS
CCCCEECHHHHHHHCCCCCCCCCCHHHHEEECCEEEEEECCCHHHHHHCCCCCEEEEECC
SDLAIISEIKEIKMEKKNNVKLGKTILPFGIEGAFGIIQALPTHFSDSIPRKAIGTKPYL
CCHHHHHHHHHHHHHCCCCEEECCEECCCCCCHHHHHHHHHHHHHCCCCCCHHCCCCCHH
LMNQFFDYSGDCYFDSELNWGVWIHK
HHHHHCCCCCCEEECCCCCCCEEEEC
>Mature Secondary Structure
MKYLRILIEGWTASFRYPAFISGFQPTLPVPPLSTIYGLLSAAKGELVTPDETNVGFVFD
CCEEEEEEECCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCEEEEEE
YDAKAVDLETIYELKGLKGNKSNVAKREFLFNPSLYLYTDDLKFKKYFKNPTYPILLGRS
CCCCEECHHHHHHHCCCCCCCCCCHHHHEEECCEEEEEECCCHHHHHHCCCCCEEEEECC
SDLAIISEIKEIKMEKKNNVKLGKTILPFGIEGAFGIIQALPTHFSDSIPRKAIGTKPYL
CCHHHHHHHHHHHHHCCCCEEECCEECCCCCCHHHHHHHHHHHHHCCCCCCHHCCCCCHH
LMNQFFDYSGDCYFDSELNWGVWIHK
HHHHHCCCCCCEEECCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA