Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

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The map label for this gene is 148642228

Identifier: 148642228

GI number: 148642228

Start: 160324

End: 161310

Strand: Reverse

Name: 148642228

Synonym: Msm_0168

Alternate gene names: NA

Gene position: 161310-160324 (Counterclockwise)

Preceding gene: 148642229

Following gene: 148642227

Centisome position: 8.7

GC content: 30.19

Gene sequence:

>987_bases
ATGACAAATAATGTTGTAGGTTTAATGTTAATTGATGCACCTCATTCTGCGCTTAATAATGCAGGATCTGATGCTGGAGA
TAGAACAGATAATATTGTTAGAGTTAAAACTATTAGAAAAGGAATGACTAGGTATCCTTATGTTTCTGGTCAAGCTTTAA
GGTATTGGTGGAGAGAAACTTTGGAAGATAAATTTGATTGGGAAATGTCTCCTATTAGTCGTGAAAAAAAGATTGCGTTC
ACAAGTGCTAATCCTATTGAATATCCTGATGATGATGTTTTTGGATATATGAGGGCTATGTCTAAAAAAGAAGGAGGAAC
TGTTACAAGAATTTCTCCTTTAAAAAATTCACCTCTAATTGCAGTAATTGGTCAGAATCCAACTGAAGATTTTGGAGTAA
TGTCTCGTCATGAAGGAGATCCTGTTCCTTATGAACATGAATTTTATTCAAATATTTTAAAAGGTATTTTTTCAATTGAT
TTAGGGGCTGTTGGAATATTTTCCGAAAGTGAAAAAACAGGATATAAAAATATGTCTGCTGATTTATTGAAATTAGCTGA
AGAAAAAGGATTGGAACACGAAGAAGATAAATGGATAATGGATAAAGACATTAGAATTAAACGTACACAAGATATTATTA
ATGCATTACCTTATTTGTCTGGAGGAGCTAAATCCGCATCCCATTTAACAGATGTAACTCCAAAAATAATAGTTCTTGCT
GCTATTGATGGTGGGAATCATATTTTCATGAATATTGTCCGTGAAGAAAAAGGAGAACTTATATTTGATTTGAATGCTTT
AGATGAAGTAATTTCAGATTATTCTGATATTATTAAATCAGATATTTTCATTGGTGTTAGAACAGGATTTTTAAAAGATA
CTCAAGATAAAATAATTGAATATGCTAAAAATAAAGAAAATGTTCATATTGGAACTATTAAAGAGATAACTGATAAATTT
TCTGATGAAATTCCTAAGTTGATTTAA

Upstream 100 bases:

>100_bases
ATTTGTTGCTTTTTAGAATATATGAAAACTTGCATGATTGGATGGTTGAAAATGATTTTGTTGAAGAAGTTTCAGAAGAA
GAATTATTGGAGGAATAAAA

Downstream 100 bases:

>100_bases
ATGAAATATTTAAGGATTTTAATTGAGGGGTGGACTGCTTCATTTAGATATCCTGCATTTATAAGTGGATTTCAGCCAAC
ATTGCCAGTTCCTCCTTTAA

Product: putative DNA repair protein

Products: NA

Alternate protein names: CRISPR-Associated Autoregulator DevR Family; CRISPR-Associated Regulatory Protein DevR Family; DNA Repair Protein

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MTNNVVGLMLIDAPHSALNNAGSDAGDRTDNIVRVKTIRKGMTRYPYVSGQALRYWWRETLEDKFDWEMSPISREKKIAF
TSANPIEYPDDDVFGYMRAMSKKEGGTVTRISPLKNSPLIAVIGQNPTEDFGVMSRHEGDPVPYEHEFYSNILKGIFSID
LGAVGIFSESEKTGYKNMSADLLKLAEEKGLEHEEDKWIMDKDIRIKRTQDIINALPYLSGGAKSASHLTDVTPKIIVLA
AIDGGNHIFMNIVREEKGELIFDLNALDEVISDYSDIIKSDIFIGVRTGFLKDTQDKIIEYAKNKENVHIGTIKEITDKF
SDEIPKLI

Sequences:

>Translated_328_residues
MTNNVVGLMLIDAPHSALNNAGSDAGDRTDNIVRVKTIRKGMTRYPYVSGQALRYWWRETLEDKFDWEMSPISREKKIAF
TSANPIEYPDDDVFGYMRAMSKKEGGTVTRISPLKNSPLIAVIGQNPTEDFGVMSRHEGDPVPYEHEFYSNILKGIFSID
LGAVGIFSESEKTGYKNMSADLLKLAEEKGLEHEEDKWIMDKDIRIKRTQDIINALPYLSGGAKSASHLTDVTPKIIVLA
AIDGGNHIFMNIVREEKGELIFDLNALDEVISDYSDIIKSDIFIGVRTGFLKDTQDKIIEYAKNKENVHIGTIKEITDKF
SDEIPKLI
>Mature_327_residues
TNNVVGLMLIDAPHSALNNAGSDAGDRTDNIVRVKTIRKGMTRYPYVSGQALRYWWRETLEDKFDWEMSPISREKKIAFT
SANPIEYPDDDVFGYMRAMSKKEGGTVTRISPLKNSPLIAVIGQNPTEDFGVMSRHEGDPVPYEHEFYSNILKGIFSIDL
GAVGIFSESEKTGYKNMSADLLKLAEEKGLEHEEDKWIMDKDIRIKRTQDIINALPYLSGGAKSASHLTDVTPKIIVLAA
IDGGNHIFMNIVREEKGELIFDLNALDEVISDYSDIIKSDIFIGVRTGFLKDTQDKIIEYAKNKENVHIGTIKEITDKFS
DEIPKLI

Specific function: Unknown

COG id: COG1857

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36897; Mature: 36766

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNNVVGLMLIDAPHSALNNAGSDAGDRTDNIVRVKTIRKGMTRYPYVSGQALRYWWRET
CCCCEEEEEEEECCHHHHHCCCCCCCCCCCCEEEEHHHHHCHHCCCCCCCHHHHHHHHHH
LEDKFDWEMSPISREKKIAFTSANPIEYPDDDVFGYMRAMSKKEGGTVTRISPLKNSPLI
HHHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCEE
AVIGQNPTEDFGVMSRHEGDPVPYEHEFYSNILKGIFSIDLGAVGIFSESEKTGYKNMSA
EEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHH
DLLKLAEEKGLEHEEDKWIMDKDIRIKRTQDIINALPYLSGGAKSASHLTDVTPKIIVLA
HHHHHHHHHCCCCCCCCEEECCCCEEEHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEEE
AIDGGNHIFMNIVREEKGELIFDLNALDEVISDYSDIIKSDIFIGVRTGFLKDTQDKIIE
EECCCCEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHH
YAKNKENVHIGTIKEITDKFSDEIPKLI
HHCCCCCEEECHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TNNVVGLMLIDAPHSALNNAGSDAGDRTDNIVRVKTIRKGMTRYPYVSGQALRYWWRET
CCCEEEEEEEECCHHHHHCCCCCCCCCCCCEEEEHHHHHCHHCCCCCCCHHHHHHHHHH
LEDKFDWEMSPISREKKIAFTSANPIEYPDDDVFGYMRAMSKKEGGTVTRISPLKNSPLI
HHHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCEE
AVIGQNPTEDFGVMSRHEGDPVPYEHEFYSNILKGIFSIDLGAVGIFSESEKTGYKNMSA
EEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHH
DLLKLAEEKGLEHEEDKWIMDKDIRIKRTQDIINALPYLSGGAKSASHLTDVTPKIIVLA
HHHHHHHHHCCCCCCCCEEECCCCEEEHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEEE
AIDGGNHIFMNIVREEKGELIFDLNALDEVISDYSDIIKSDIFIGVRTGFLKDTQDKIIE
EECCCCEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHH
YAKNKENVHIGTIKEITDKFSDEIPKLI
HHCCCCCEEECHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA