Click here to switch to the map view.

The map label for this gene is etfB [H]

Identifier: 148381146

GI number: 148381146

Start: 3406792

End: 3407571

Strand: Reverse

Name: etfB [H]

Synonym: CBO3198

Alternate gene names: 148381146

Gene position: 3407571-3406792 (Counterclockwise)

Preceding gene: 148381147

Following gene: 148381145

Centisome position: 87.67

GC content: 33.21

Gene sequence:

>780_bases
ATGAATATAGTTGTTTGTTTAAAACAAGTACCAGATACAAATGAAGTTAAAATAGATCCTGTAAAAGGAACTCTAATAAG
AGACGGAGTTCCATCCATCATAAATCCAGATGATAAAAACGCTTTAGAGGAAGCTTTAATATTAAAAGAAAACAATGGTG
CAAAAGTTACTGTAATAAGTATGGGACCACCTCAAGCTAAAGATGCGCTAAGAGAAGCTTTAGCTATGGGAGCTGACGAG
GCAATACTCATATCTGATAGAGCTTTTGCAGGAGCGGATACATTAGCAACATCCTATGCTCTAGCCACTGCTATTAAAAA
AATAGATTACGATATAATATTTGCAGGAAGACAAGCAATAGACGGAGATACAGCGCAAGTAGGACCAGAAATGGCTGAAC
ATCTAAATATACCTCAAGTTACTTATGTAGAAAAAGTAGAAGTACATGATGATGAATTAGAGGTTAAAAAATCATTGGAA
GATGGATATGAAATAGTATCTGTAAAAATGCCAGTACTTCTAACTGCTATAAAAGATTTAAATACTCCACGATATATGCA
TATGGCTAAAATATTCGAATGCTTTAATAAAGAAATAAAAGTATGGAGTGCAGAGGATATTGAAGCTGACAAATCACTAT
TAGGGCTTTCAGGTTCACCAACAAAAGTAAAAAAATCTATTACAAAGGAAACAAAAAGAGAAGGAGTTTTGGTAAATAAG
CCTTTTAAAGAAGCGGCACAGTATGCAGCAGAAAAATTAAAAGAAAAACATTTTATTTAG

Upstream 100 bases:

>100_bases
GAATGTTAAGAGATGCTAGAATAACTGAAATATATGAAGGAACTTCAGAAGTACAAAAAATGGTTATAGCTAATAACTTA
TTACACTAGGAGGAGTTTAT

Downstream 100 bases:

>100_bases
GTTGGGGGAGATATGATGAATTTATCAGATTTTAAAGGTGTTTGGATTTTTGCAGAACAGAGAGAAGGTAAGCTTCAAAA
AGTAGCTTTAGAGCTAATAG

Product: electron transfer flavoprotein, beta subunit/FixA family protein

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MNIVVCLKQVPDTNEVKIDPVKGTLIRDGVPSIINPDDKNALEEALILKENNGAKVTVISMGPPQAKDALREALAMGADE
AILISDRAFAGADTLATSYALATAIKKIDYDIIFAGRQAIDGDTAQVGPEMAEHLNIPQVTYVEKVEVHDDELEVKKSLE
DGYEIVSVKMPVLLTAIKDLNTPRYMHMAKIFECFNKEIKVWSAEDIEADKSLLGLSGSPTKVKKSITKETKREGVLVNK
PFKEAAQYAAEKLKEKHFI

Sequences:

>Translated_259_residues
MNIVVCLKQVPDTNEVKIDPVKGTLIRDGVPSIINPDDKNALEEALILKENNGAKVTVISMGPPQAKDALREALAMGADE
AILISDRAFAGADTLATSYALATAIKKIDYDIIFAGRQAIDGDTAQVGPEMAEHLNIPQVTYVEKVEVHDDELEVKKSLE
DGYEIVSVKMPVLLTAIKDLNTPRYMHMAKIFECFNKEIKVWSAEDIEADKSLLGLSGSPTKVKKSITKETKREGVLVNK
PFKEAAQYAAEKLKEKHFI
>Mature_259_residues
MNIVVCLKQVPDTNEVKIDPVKGTLIRDGVPSIINPDDKNALEEALILKENNGAKVTVISMGPPQAKDALREALAMGADE
AILISDRAFAGADTLATSYALATAIKKIDYDIIFAGRQAIDGDTAQVGPEMAEHLNIPQVTYVEKVEVHDDELEVKKSLE
DGYEIVSVKMPVLLTAIKDLNTPRYMHMAKIFECFNKEIKVWSAEDIEADKSLLGLSGSPTKVKKSITKETKREGVLVNK
PFKEAAQYAAEKLKEKHFI

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=215, Percent_Identity=33.953488372093, Blast_Score=111, Evalue=5e-25,
Organism=Homo sapiens, GI62420877, Length=201, Percent_Identity=34.3283582089552, Blast_Score=109, Evalue=2e-24,
Organism=Escherichia coli, GI2367123, Length=262, Percent_Identity=27.8625954198473, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI87081682, Length=211, Percent_Identity=34.5971563981043, Blast_Score=96, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI25141345, Length=215, Percent_Identity=33.4883720930233, Blast_Score=114, Evalue=5e-26,
Organism=Saccharomyces cerevisiae, GI6321646, Length=207, Percent_Identity=34.2995169082126, Blast_Score=100, Evalue=3e-22,
Organism=Drosophila melanogaster, GI24651147, Length=215, Percent_Identity=33.953488372093, Blast_Score=102, Evalue=3e-22,
Organism=Drosophila melanogaster, GI24651145, Length=215, Percent_Identity=33.953488372093, Blast_Score=102, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 28449; Mature: 28449

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIVVCLKQVPDTNEVKIDPVKGTLIRDGVPSIINPDDKNALEEALILKENNGAKVTVIS
CCEEEEEECCCCCCCEEEECCCCEEECCCCCCCCCCCCHHHHHHHHEEECCCCCEEEEEE
MGPPQAKDALREALAMGADEAILISDRAFAGADTLATSYALATAIKKIDYDIIFAGRQAI
CCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCC
DGDTAQVGPEMAEHLNIPQVTYVEKVEVHDDELEVKKSLEDGYEIVSVKMPVLLTAIKDL
CCCHHHCCHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHC
NTPRYMHMAKIFECFNKEIKVWSAEDIEADKSLLGLSGSPTKVKKSITKETKREGVLVNK
CCCHHHHHHHHHHHHCCCEEEECCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCEEEEC
PFKEAAQYAAEKLKEKHFI
CHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNIVVCLKQVPDTNEVKIDPVKGTLIRDGVPSIINPDDKNALEEALILKENNGAKVTVIS
CCEEEEEECCCCCCCEEEECCCCEEECCCCCCCCCCCCHHHHHHHHEEECCCCCEEEEEE
MGPPQAKDALREALAMGADEAILISDRAFAGADTLATSYALATAIKKIDYDIIFAGRQAI
CCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCC
DGDTAQVGPEMAEHLNIPQVTYVEKVEVHDDELEVKKSLEDGYEIVSVKMPVLLTAIKDL
CCCHHHCCHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHC
NTPRYMHMAKIFECFNKEIKVWSAEDIEADKSLLGLSGSPTKVKKSITKETKREGVLVNK
CCCHHHHHHHHHHHHCCCEEEECCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCEEEEC
PFKEAAQYAAEKLKEKHFI
CHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8655474; 11466286 [H]