| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is expZ [H]
Identifier: 148380816
GI number: 148380816
Start: 3036690
End: 3038168
Strand: Reverse
Name: expZ [H]
Synonym: CBO2858
Alternate gene names: 148380816
Gene position: 3038168-3036690 (Counterclockwise)
Preceding gene: 148380817
Following gene: 148380815
Centisome position: 78.16
GC content: 31.91
Gene sequence:
>1479_bases ATGTCTTTAATAAATGTTACAAACCTAACCTTTGCTTATGAAGGTAGCTATGATAATATTTTTGAAAATGTAAGTTTTCA AATTGATACAGATTGGAAATTGGGGTTTACTGGAAGAAATGGAAGAGGAAAGACTACTTTTCTAAGTCTTTTGCTTGGGA AATACGAATATAATGGAAACATTTCAGCTGATGTGACTTTTGAATATTTTCCTTATGAGGTGCAGGAGCAGAGCAATTTC ACCATAGATATCATAAGGGAGATTAGTCCAAATTCAATGGATTGGGAAATAGTAAAAGAATTATCTTTGTTAGATATGGA CTATGATGCTTTATATAGACAGTTTTATACACTATCTAAAGGAGAGCAGACTAAAGCACTGTTGGCTGCTATGTTTTTAA AGGAGAGCTCCTTCTTGCTTATTGATGAGCCTACCAATCATTTGGATGCTGAAGCTAGGCAAAAACTAAGTAATTACTTG AAAAAAAAGAAAGGATTTATTCTGATTTCACATGATAGGTCTTTTTTGGATAATTGTGTTGACCATATCCTGTCTATTAA TAAAACTAATATTGAAATACAAAAAGGAAATTTTTCTTCATGGTGGAGAAACAAAGAATTACAAGATGGTTTTGAGCTAG CAGAAAACGAAAAATTGAAAAAAGATATTAACAGACTTTCAAGCTCGGCAAAACGTACATCTACGTGGTCAGATAGTGTT GAAGGCAGCAAGCATGGAACTACCAATTCTGGGAGCAAATTAGATAAAGGATATGTTGGACATAAAGCTGCAAAAATGAT GAAGCGTGCTAAAAATATAGAAGCTAGACAACAAAACATGATTGAGGAAAAATCAAAGCTTCTTAAAAATATTGAATCTA ATGAAAGTTTAAAAATAGTACCGCTTACTTTCCATGATAAAAAGCTTGTAGAACTTACAGATGTTGCAATTGAATATGAT GATAGAATTGTCTGTGAAGGAGTAAGCTTCACTATAGAGCAAGGTGAAAGAATTGCTATTCAAGGAAAGAATGGTAGCGG AAAATCAAGTATATTGAAATTAATTTATGGAGAAGACATCCCCCATAGTGGAATTGTAAGAAAGAATAATAAGTTAATCA TTTCGTATGTTTCACAAGATACTTCAGATTTATATGGTAACTTATCTGAATATGCAGATAAACACTGTATTGACGAGAGT TTATTTAAATCGATACTTAGAAAGCTTGATTTTTCAAGAGAACAGTTTGAAAAGAATATCGAGGATTTTAGTGGAGGACA GAAAAAAAAGGTATTGATTGCCAAAAGTTTGTGTGAACGGGCACATTTGTATATTTGGGATGAACCGCTGAATTTTATTG ATGTCATTTCTCGTATGCAGATTGAGAAATTGTTAATTGAACATGAACCTACAATTTTGTTTATTGAGCATGATAGTGCA TTTTGTGAAAATGTTGCAACAAAAACAATAAAATTGTAA
Upstream 100 bases:
>100_bases AGTCGGATATTGCAGGCGACACTTATATGGAGTAATAACAAGGTCGCCTATTGTTCCGACTTTGTTATTTATACTATTAA ATACAGAGGAGGATAAAAAT
Downstream 100 bases:
>100_bases AGGCAGAAATGGCGATTAATATGTTTAATGGGAATATAAAAGTAACACACAATAGGCTCCATGCAAAGCCAGATGTTTTG GGCGACGCTTGCATGGAGTA
Product: drug resistance ABC transporter, RA2 family, ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 492; Mature: 491
Protein sequence:
>492_residues MSLINVTNLTFAYEGSYDNIFENVSFQIDTDWKLGFTGRNGRGKTTFLSLLLGKYEYNGNISADVTFEYFPYEVQEQSNF TIDIIREISPNSMDWEIVKELSLLDMDYDALYRQFYTLSKGEQTKALLAAMFLKESSFLLIDEPTNHLDAEARQKLSNYL KKKKGFILISHDRSFLDNCVDHILSINKTNIEIQKGNFSSWWRNKELQDGFELAENEKLKKDINRLSSSAKRTSTWSDSV EGSKHGTTNSGSKLDKGYVGHKAAKMMKRAKNIEARQQNMIEEKSKLLKNIESNESLKIVPLTFHDKKLVELTDVAIEYD DRIVCEGVSFTIEQGERIAIQGKNGSGKSSILKLIYGEDIPHSGIVRKNNKLIISYVSQDTSDLYGNLSEYADKHCIDES LFKSILRKLDFSREQFEKNIEDFSGGQKKKVLIAKSLCERAHLYIWDEPLNFIDVISRMQIEKLLIEHEPTILFIEHDSA FCENVATKTIKL
Sequences:
>Translated_492_residues MSLINVTNLTFAYEGSYDNIFENVSFQIDTDWKLGFTGRNGRGKTTFLSLLLGKYEYNGNISADVTFEYFPYEVQEQSNF TIDIIREISPNSMDWEIVKELSLLDMDYDALYRQFYTLSKGEQTKALLAAMFLKESSFLLIDEPTNHLDAEARQKLSNYL KKKKGFILISHDRSFLDNCVDHILSINKTNIEIQKGNFSSWWRNKELQDGFELAENEKLKKDINRLSSSAKRTSTWSDSV EGSKHGTTNSGSKLDKGYVGHKAAKMMKRAKNIEARQQNMIEEKSKLLKNIESNESLKIVPLTFHDKKLVELTDVAIEYD DRIVCEGVSFTIEQGERIAIQGKNGSGKSSILKLIYGEDIPHSGIVRKNNKLIISYVSQDTSDLYGNLSEYADKHCIDES LFKSILRKLDFSREQFEKNIEDFSGGQKKKVLIAKSLCERAHLYIWDEPLNFIDVISRMQIEKLLIEHEPTILFIEHDSA FCENVATKTIKL >Mature_491_residues SLINVTNLTFAYEGSYDNIFENVSFQIDTDWKLGFTGRNGRGKTTFLSLLLGKYEYNGNISADVTFEYFPYEVQEQSNFT IDIIREISPNSMDWEIVKELSLLDMDYDALYRQFYTLSKGEQTKALLAAMFLKESSFLLIDEPTNHLDAEARQKLSNYLK KKKGFILISHDRSFLDNCVDHILSINKTNIEIQKGNFSSWWRNKELQDGFELAENEKLKKDINRLSSSAKRTSTWSDSVE GSKHGTTNSGSKLDKGYVGHKAAKMMKRAKNIEARQQNMIEEKSKLLKNIESNESLKIVPLTFHDKKLVELTDVAIEYDD RIVCEGVSFTIEQGERIAIQGKNGSGKSSILKLIYGEDIPHSGIVRKNNKLIISYVSQDTSDLYGNLSEYADKHCIDESL FKSILRKLDFSREQFEKNIEDFSGGQKKKVLIAKSLCERAHLYIWDEPLNFIDVISRMQIEKLLIEHEPTILFIEHDSAF CENVATKTIKL
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI27881506, Length=529, Percent_Identity=24.3856332703214, Blast_Score=108, Evalue=2e-23, Organism=Homo sapiens, GI10947137, Length=529, Percent_Identity=24.3856332703214, Blast_Score=108, Evalue=2e-23, Organism=Homo sapiens, GI148612853, Length=535, Percent_Identity=23.7383177570093, Blast_Score=103, Evalue=4e-22, Organism=Homo sapiens, GI10947135, Length=400, Percent_Identity=25.25, Blast_Score=96, Evalue=6e-20, Organism=Homo sapiens, GI69354671, Length=400, Percent_Identity=25.25, Blast_Score=96, Evalue=7e-20, Organism=Homo sapiens, GI157502203, Length=201, Percent_Identity=29.3532338308458, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI157502201, Length=201, Percent_Identity=29.3532338308458, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI90421313, Length=184, Percent_Identity=26.0869565217391, Blast_Score=69, Evalue=9e-12, Organism=Escherichia coli, GI2367384, Length=529, Percent_Identity=25.7088846880907, Blast_Score=152, Evalue=5e-38, Organism=Escherichia coli, GI1787041, Length=526, Percent_Identity=25.8555133079848, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI1789751, Length=505, Percent_Identity=25.9405940594059, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI1787182, Length=548, Percent_Identity=24.0875912408759, Blast_Score=118, Evalue=7e-28, Organism=Escherichia coli, GI1787164, Length=192, Percent_Identity=26.5625, Blast_Score=76, Evalue=6e-15, Organism=Escherichia coli, GI1789962, Length=197, Percent_Identity=26.3959390862944, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI87081709, Length=198, Percent_Identity=25.7575757575758, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1787029, Length=208, Percent_Identity=23.5576923076923, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17559834, Length=519, Percent_Identity=22.1579961464355, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17555318, Length=384, Percent_Identity=25.5208333333333, Blast_Score=96, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17553372, Length=508, Percent_Identity=23.8188976377953, Blast_Score=91, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6320874, Length=539, Percent_Identity=20.4081632653061, Blast_Score=105, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6321121, Length=385, Percent_Identity=24.1558441558442, Blast_Score=95, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6325030, Length=186, Percent_Identity=27.4193548387097, Blast_Score=74, Evalue=4e-14, Organism=Drosophila melanogaster, GI24641342, Length=529, Percent_Identity=26.0869565217391, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI24642252, Length=538, Percent_Identity=23.7918215613383, Blast_Score=121, Evalue=1e-27, Organism=Drosophila melanogaster, GI18859989, Length=538, Percent_Identity=23.7918215613383, Blast_Score=121, Evalue=1e-27, Organism=Drosophila melanogaster, GI24666836, Length=519, Percent_Identity=22.7360308285164, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI28574259, Length=205, Percent_Identity=25.3658536585366, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI45550390, Length=173, Percent_Identity=26.5895953757225, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 56467; Mature: 56336
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLINVTNLTFAYEGSYDNIFENVSFQIDTDWKLGFTGRNGRGKTTFLSLLLGKYEYNGN CCEEEEEEEEEEEECCHHHHHCCCEEEEECCEEEEECCCCCCCHHHHHHHHHHHEEECCC ISADVTFEYFPYEVQEQSNFTIDIIREISPNSMDWEIVKELSLLDMDYDALYRQFYTLSK CEEEEEEEECCCEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCC GEQTKALLAAMFLKESSFLLIDEPTNHLDAEARQKLSNYLKKKKGFILISHDRSFLDNCV CCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEECCHHHHHHHH DHILSINKTNIEIQKGNFSSWWRNKELQDGFELAENEKLKKDINRLSSSAKRTSTWSDSV HHHHCCCCCEEEEECCCCHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCC EGSKHGTTNSGSKLDKGYVGHKAAKMMKRAKNIEARQQNMIEEKSKLLKNIESNESLKIV CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCEEEE PLTFHDKKLVELTDVAIEYDDRIVCEGVSFTIEQGERIAIQGKNGSGKSSILKLIYGEDI EEEECCCHHEEHHHEEEECCCEEEECCCEEEECCCCEEEEECCCCCCHHHHHHHEECCCC PHSGIVRKNNKLIISYVSQDTSDLYGNLSEYADKHCIDESLFKSILRKLDFSREQFEKNI CCCCEEECCCCEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH EDFSGGQKKKVLIAKSLCERAHLYIWDEPLNFIDVISRMQIEKLLIEHEPTILFIEHDSA HHHCCCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHH FCENVATKTIKL HHHHHHHHHCCC >Mature Secondary Structure SLINVTNLTFAYEGSYDNIFENVSFQIDTDWKLGFTGRNGRGKTTFLSLLLGKYEYNGN CEEEEEEEEEEEECCHHHHHCCCEEEEECCEEEEECCCCCCCHHHHHHHHHHHEEECCC ISADVTFEYFPYEVQEQSNFTIDIIREISPNSMDWEIVKELSLLDMDYDALYRQFYTLSK CEEEEEEEECCCEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCC GEQTKALLAAMFLKESSFLLIDEPTNHLDAEARQKLSNYLKKKKGFILISHDRSFLDNCV CCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEECCHHHHHHHH DHILSINKTNIEIQKGNFSSWWRNKELQDGFELAENEKLKKDINRLSSSAKRTSTWSDSV HHHHCCCCCEEEEECCCCHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCC EGSKHGTTNSGSKLDKGYVGHKAAKMMKRAKNIEARQQNMIEEKSKLLKNIESNESLKIV CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCEEEE PLTFHDKKLVELTDVAIEYDDRIVCEGVSFTIEQGERIAIQGKNGSGKSSILKLIYGEDI EEEECCCHHEEHHHEEEECCCEEEECCCEEEECCCCEEEEECCCCCCHHHHHHHEECCCC PHSGIVRKNNKLIISYVSQDTSDLYGNLSEYADKHCIDESLFKSILRKLDFSREQFEKNI CCCCEEECCCCEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH EDFSGGQKKKVLIAKSLCERAHLYIWDEPLNFIDVISRMQIEKLLIEHEPTILFIEHDSA HHHCCCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHH FCENVATKTIKL HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]