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The map label for this gene is 148361160

Identifier: 148361160

GI number: 148361160

Start: 3393566

End: 3394870

Strand: Direct

Name: 148361160

Synonym: LPC_3134

Alternate gene names: NA

Gene position: 3393566-3394870 (Clockwise)

Preceding gene: 148361157

Following gene: 148361172

Centisome position: 94.89

GC content: 38.54

Gene sequence:

>1305_bases
ATGACCCAACAAGATCCTGTTGTAATTAAATCCAAGGGAGACCAGGCTTTAGAGAAGGGCGATTTGCCTCTTGCCTTAAC
ACTGTATGATGAAGCATTAGCGATAAACCCACAATTTTCCGGAGCCTATTATCAAAAAGGAACCGTTTTACTTCGCATGG
GTAAAGCCATAGAAGCAGCAGCCATGTACTGGCAAGCTTATTTATTCAGCGAATTCAAAACTGACATAGGATTAATGACA
GCAAAAACTCTGGCGCATGCTAATTATTCTTTGTCAGCCTGCAAGCTTTTTGAATCATTTAAAATTGAAGAAATGGACGG
TGAAAGCCTCGCATATTACCTCTATGCTCTAAGGCAACAAGGAAGGGCACAAGAAGCGTATGCCTTATTCCCTTATGTAA
ACCAATTCAATATCCCCAAAACAAGTTGGGCAAGAGCCATTATTTTGCTTGATCTTAATAAAGTAGAGGAAGCGCGCTTC
TTACTTGAACCACTTGAAAAAACGGATAAGGATGGACACATCACCATTTTACTGCACGCGGTATATCTGGCTTTAAATGA
TAAAAAAGCAGTAAAATCTCTTTTAGACAGAGCAATTCAACGCATACCCAATAATGATTATTTTTGCTGCCAGCGAATTG
CAATAGACATACTCAATGGTTTAAACAAGACACCGATAGAAACGTATCGCGCATTCAAACGCTTTGATCTCATTGATGCA
GCTGATTATCTTCATAAACATGCTGACAAACATTTGCGACATAGTGGAACACTTTATCAAACATTTGATTTATTAGCGCC
ACAGGTTCTTTCTGAAGGCTTAATACTGGAATTTGGAGTGCGCTTTGGCTATTCCATTTCCCATATTGCCAAACTCTTTC
CCAAACGCAAAATTTTCGGTTTTGACAGTTTTCAAGGGTTACCTGAAGATTGGTACCACGAAAAGGCTGGCTCCTATTCC
ACCTACGGCAAAATTCCCTCCGTAGCAAGTAATGTGACTTTAATCGCTGGATGGTTTAATGAAACTTTGCCAGATTTTAA
AAAAAATAACAGGGAACCCATAGCTTTTATGAATATCGATTGTGATCTCTATTCTTCCACTAAATTGGTGTTCAACGAAT
TAAACTCCCAGATTGCACCAGGTACTATCATAGTATTCGATGAGTACATTGGTAATATCAATTGGCGCCAGGATGAATTT
AAAGCTTTCCAAGAATGGGTAAAAGAAAATAAAGTGGAATATCGTTATCTTACTGCCAGTTTTTATACCAAACAGGTCTC
AGTACAAATTCTTAAGAGAAAGTGA

Upstream 100 bases:

>100_bases
ATTATTTTTTCATGAAATTGATTAATAAGGATTTTTTTAATACAACTACATTACTAATAAAAGAATACTATGATATAGAA
GTAGGTACTGGAGAAAATAA

Downstream 100 bases:

>100_bases
AAAATAATTGAAAAAATTAATGCAATTTATTGGCATTAAAAAACCACCTCCCTCTTCGTTGTTTTGAGACAAAGAGGAAG
GTAATTCAGTGAATACGGGA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MTQQDPVVIKSKGDQALEKGDLPLALTLYDEALAINPQFSGAYYQKGTVLLRMGKAIEAAAMYWQAYLFSEFKTDIGLMT
AKTLAHANYSLSACKLFESFKIEEMDGESLAYYLYALRQQGRAQEAYALFPYVNQFNIPKTSWARAIILLDLNKVEEARF
LLEPLEKTDKDGHITILLHAVYLALNDKKAVKSLLDRAIQRIPNNDYFCCQRIAIDILNGLNKTPIETYRAFKRFDLIDA
ADYLHKHADKHLRHSGTLYQTFDLLAPQVLSEGLILEFGVRFGYSISHIAKLFPKRKIFGFDSFQGLPEDWYHEKAGSYS
TYGKIPSVASNVTLIAGWFNETLPDFKKNNREPIAFMNIDCDLYSSTKLVFNELNSQIAPGTIIVFDEYIGNINWRQDEF
KAFQEWVKENKVEYRYLTASFYTKQVSVQILKRK

Sequences:

>Translated_434_residues
MTQQDPVVIKSKGDQALEKGDLPLALTLYDEALAINPQFSGAYYQKGTVLLRMGKAIEAAAMYWQAYLFSEFKTDIGLMT
AKTLAHANYSLSACKLFESFKIEEMDGESLAYYLYALRQQGRAQEAYALFPYVNQFNIPKTSWARAIILLDLNKVEEARF
LLEPLEKTDKDGHITILLHAVYLALNDKKAVKSLLDRAIQRIPNNDYFCCQRIAIDILNGLNKTPIETYRAFKRFDLIDA
ADYLHKHADKHLRHSGTLYQTFDLLAPQVLSEGLILEFGVRFGYSISHIAKLFPKRKIFGFDSFQGLPEDWYHEKAGSYS
TYGKIPSVASNVTLIAGWFNETLPDFKKNNREPIAFMNIDCDLYSSTKLVFNELNSQIAPGTIIVFDEYIGNINWRQDEF
KAFQEWVKENKVEYRYLTASFYTKQVSVQILKRK
>Mature_433_residues
TQQDPVVIKSKGDQALEKGDLPLALTLYDEALAINPQFSGAYYQKGTVLLRMGKAIEAAAMYWQAYLFSEFKTDIGLMTA
KTLAHANYSLSACKLFESFKIEEMDGESLAYYLYALRQQGRAQEAYALFPYVNQFNIPKTSWARAIILLDLNKVEEARFL
LEPLEKTDKDGHITILLHAVYLALNDKKAVKSLLDRAIQRIPNNDYFCCQRIAIDILNGLNKTPIETYRAFKRFDLIDAA
DYLHKHADKHLRHSGTLYQTFDLLAPQVLSEGLILEFGVRFGYSISHIAKLFPKRKIFGFDSFQGLPEDWYHEKAGSYST
YGKIPSVASNVTLIAGWFNETLPDFKKNNREPIAFMNIDCDLYSSTKLVFNELNSQIAPGTIIVFDEYIGNINWRQDEFK
AFQEWVKENKVEYRYLTASFYTKQVSVQILKRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49829; Mature: 49697

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQQDPVVIKSKGDQALEKGDLPLALTLYDEALAINPQFSGAYYQKGTVLLRMGKAIEAA
CCCCCCEEEECCCCHHHHHCCCCEEEEEECCEEEECCCCCCCEEECCEEEEEECCHHHHH
AMYWQAYLFSEFKTDIGLMTAKTLAHANYSLSACKLFESFKIEEMDGESLAYYLYALRQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
GRAQEAYALFPYVNQFNIPKTSWARAIILLDLNKVEEARFLLEPLEKTDKDGHITILLHA
CCCCCCEEEECCCCCCCCCCHHHCCEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEE
VYLALNDKKAVKSLLDRAIQRIPNNDYFCCQRIAIDILNGLNKTPIETYRAFKRFDLIDA
HHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
ADYLHKHADKHLRHSGTLYQTFDLLAPQVLSEGLILEFGVRFGYSISHIAKLFPKRKIFG
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHCCCCCCCC
FDSFQGLPEDWYHEKAGSYSTYGKIPSVASNVTLIAGWFNETLPDFKKNNREPIAFMNID
CHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEECHHHCCCHHHHCCCCCEEEEEEC
CDLYSSTKLVFNELNSQIAPGTIIVFDEYIGNINWRQDEFKAFQEWVKENKVEYRYLTAS
CCCCCCHHHHHHHHCCCCCCCEEEEEEHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEHH
FYTKQVSVQILKRK
HHHHHHHHEEECCC
>Mature Secondary Structure 
TQQDPVVIKSKGDQALEKGDLPLALTLYDEALAINPQFSGAYYQKGTVLLRMGKAIEAA
CCCCCEEEECCCCHHHHHCCCCEEEEEECCEEEECCCCCCCEEECCEEEEEECCHHHHH
AMYWQAYLFSEFKTDIGLMTAKTLAHANYSLSACKLFESFKIEEMDGESLAYYLYALRQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
GRAQEAYALFPYVNQFNIPKTSWARAIILLDLNKVEEARFLLEPLEKTDKDGHITILLHA
CCCCCCEEEECCCCCCCCCCHHHCCEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEE
VYLALNDKKAVKSLLDRAIQRIPNNDYFCCQRIAIDILNGLNKTPIETYRAFKRFDLIDA
HHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
ADYLHKHADKHLRHSGTLYQTFDLLAPQVLSEGLILEFGVRFGYSISHIAKLFPKRKIFG
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHCCCCCCCC
FDSFQGLPEDWYHEKAGSYSTYGKIPSVASNVTLIAGWFNETLPDFKKNNREPIAFMNID
CHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEECHHHCCCHHHHCCCCCEEEEEEC
CDLYSSTKLVFNELNSQIAPGTIIVFDEYIGNINWRQDEFKAFQEWVKENKVEYRYLTAS
CCCCCCHHHHHHHHCCCCCCCEEEEEEHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEHH
FYTKQVSVQILKRK
HHHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA