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The map label for this gene is 148361157

Identifier: 148361157

GI number: 148361157

Start: 3390102

End: 3391241

Strand: Direct

Name: 148361157

Synonym: LPC_3131

Alternate gene names: NA

Gene position: 3390102-3391241 (Clockwise)

Preceding gene: 148361156

Following gene: 148361160

Centisome position: 94.79

GC content: 32.54

Gene sequence:

>1140_bases
GTGAAAGATACCGTTTTTCAAGAAATAATAAAACCAATAACTACCGATTTACTTAAAGAATGTGTGACTATTTTCAAATC
TGATTATGATTATGAAAAATTTAAGACCTATGAGCATTTACAATCGATGCTGTATGTTCATCTCAATCAAATAAGTAGTT
TGAGAACATTAGAAACGGCAATTAATAGTCAAGATTTAGGGCTATCGGCGAAGATATGTCGTTCTACTTTAAGCGATGCG
AATCGAAGACGAAAAGCCGATTGTTTTTTATGGATACTGGAACAATTACTGGAGATGTTACCTAAAAAGCAAAAAAAAGA
ATTTTCAAAAATAGTTCGAGTTTTAGATAGCAGTCCAATTCAACTCAAAGGATATGGTTATGAATGGGCAAAACACAATG
CAACACGCCGATGTGAAGGGCTAAAATTGCATGTTGAATATGATTTAGGATTAGAATCACCAACACGAGTTGCGTTAAGC
TTTCCAAATTTTAATGATTCGTCAATGGGTAAACAATGGCCAATAGAAACCGATATCATTTATGTGTTTGATAAAGGATA
TTGTGATTATGATTGGTGGTGGAGTATCCATCAAAAAAAAGCGTTTTTCGTTTCTAGATTAAAAGTTAATGCTGCTATTA
GCATAGAGCAGAAATTTGAAACAAATGAAAACTCTCCTATTCTTGAAGATGGCTTATTTCGATTTTCCAATCCTAAGCCT
AGAGGTGGCAAAAAAAATTTATATACTTCTCTTGCAAGACGAATTAGTGTTCAGCGCGAGGATAAAGACCCTCTTATTCT
TGTGACTAATCTTCTTGATGAACCAGCCGAAATGATTGCCCAATTATACAAATCCAGATGGGAAATTGAGCTTTTTTTTA
AATGGATAAAGCAACGATTAAAAATAAAAAAAATTCTTGGAAAGTCTGAAAATGCTGTAAAAATCCAACTGATTACCGCA
ATTATTGCATATCTTCTCGTATTTTTATTTAAAAATAGTCACAATCAAACAACACCACTTTACTTGATGCTCGTTTGGAT
CAAATGCAACTTAGAAAAACCAGTACTATTTAATGCTTTCTATTTAGATAAAAAGCCTATGTCTCCAGAAGTTAAATATC
TACTGGAGACTAAAACTTAA

Upstream 100 bases:

>100_bases
CGAAGGCGCACTACTGTCCGGTAAAGGAAGAAATAGTTGAGCGTCCTTGATTAAGCGCTAAGATAGCGCCCTAAATCCCC
ATTTAGGTCAAGGACGTACA

Downstream 100 bases:

>100_bases
ACCGGACAGTAGTGCGCCTTCGCGGGAAAGACAGAAGACCTAATATTCCTTAATTACATACCCCATGAACAGTTACAATG
CTAGGGAAACTGCTTATTGT

Product: transposase IS4

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MKDTVFQEIIKPITTDLLKECVTIFKSDYDYEKFKTYEHLQSMLYVHLNQISSLRTLETAINSQDLGLSAKICRSTLSDA
NRRRKADCFLWILEQLLEMLPKKQKKEFSKIVRVLDSSPIQLKGYGYEWAKHNATRRCEGLKLHVEYDLGLESPTRVALS
FPNFNDSSMGKQWPIETDIIYVFDKGYCDYDWWWSIHQKKAFFVSRLKVNAAISIEQKFETNENSPILEDGLFRFSNPKP
RGGKKNLYTSLARRISVQREDKDPLILVTNLLDEPAEMIAQLYKSRWEIELFFKWIKQRLKIKKILGKSENAVKIQLITA
IIAYLLVFLFKNSHNQTTPLYLMLVWIKCNLEKPVLFNAFYLDKKPMSPEVKYLLETKT

Sequences:

>Translated_379_residues
MKDTVFQEIIKPITTDLLKECVTIFKSDYDYEKFKTYEHLQSMLYVHLNQISSLRTLETAINSQDLGLSAKICRSTLSDA
NRRRKADCFLWILEQLLEMLPKKQKKEFSKIVRVLDSSPIQLKGYGYEWAKHNATRRCEGLKLHVEYDLGLESPTRVALS
FPNFNDSSMGKQWPIETDIIYVFDKGYCDYDWWWSIHQKKAFFVSRLKVNAAISIEQKFETNENSPILEDGLFRFSNPKP
RGGKKNLYTSLARRISVQREDKDPLILVTNLLDEPAEMIAQLYKSRWEIELFFKWIKQRLKIKKILGKSENAVKIQLITA
IIAYLLVFLFKNSHNQTTPLYLMLVWIKCNLEKPVLFNAFYLDKKPMSPEVKYLLETKT
>Mature_379_residues
MKDTVFQEIIKPITTDLLKECVTIFKSDYDYEKFKTYEHLQSMLYVHLNQISSLRTLETAINSQDLGLSAKICRSTLSDA
NRRRKADCFLWILEQLLEMLPKKQKKEFSKIVRVLDSSPIQLKGYGYEWAKHNATRRCEGLKLHVEYDLGLESPTRVALS
FPNFNDSSMGKQWPIETDIIYVFDKGYCDYDWWWSIHQKKAFFVSRLKVNAAISIEQKFETNENSPILEDGLFRFSNPKP
RGGKKNLYTSLARRISVQREDKDPLILVTNLLDEPAEMIAQLYKSRWEIELFFKWIKQRLKIKKILGKSENAVKIQLITA
IIAYLLVFLFKNSHNQTTPLYLMLVWIKCNLEKPVLFNAFYLDKKPMSPEVKYLLETKT

Specific function: Unknown

COG id: COG3385

COG function: function code L; FOG: Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012337
- InterPro:   IPR002559
- InterPro:   IPR014736 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 44540; Mature: 44540

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDTVFQEIIKPITTDLLKECVTIFKSDYDYEKFKTYEHLQSMLYVHLNQISSLRTLETA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INSQDLGLSAKICRSTLSDANRRRKADCFLWILEQLLEMLPKKQKKEFSKIVRVLDSSPI
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCE
QLKGYGYEWAKHNATRRCEGLKLHVEYDLGLESPTRVALSFPNFNDSSMGKQWPIETDII
EEEECCCHHHHCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCEE
YVFDKGYCDYDWWWSIHQKKAFFVSRLKVNAAISIEQKFETNENSPILEDGLFRFSNPKP
EEEECCCCCCHHHHHHHHHHHHHHHHEEEEEEEEEHHHHCCCCCCCCHHHCCHHCCCCCC
RGGKKNLYTSLARRISVQREDKDPLILVTNLLDEPAEMIAQLYKSRWEIELFFKWIKQRL
CCCCHHHHHHHHHHHHCCCCCCCCEEEEHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHH
KIKKILGKSENAVKIQLITAIIAYLLVFLFKNSHNQTTPLYLMLVWIKCNLEKPVLFNAF
HHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEEEEECCCCCEEEEEE
YLDKKPMSPEVKYLLETKT
EECCCCCCHHHHEEEECCC
>Mature Secondary Structure
MKDTVFQEIIKPITTDLLKECVTIFKSDYDYEKFKTYEHLQSMLYVHLNQISSLRTLETA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INSQDLGLSAKICRSTLSDANRRRKADCFLWILEQLLEMLPKKQKKEFSKIVRVLDSSPI
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCE
QLKGYGYEWAKHNATRRCEGLKLHVEYDLGLESPTRVALSFPNFNDSSMGKQWPIETDII
EEEECCCHHHHCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCEE
YVFDKGYCDYDWWWSIHQKKAFFVSRLKVNAAISIEQKFETNENSPILEDGLFRFSNPKP
EEEECCCCCCHHHHHHHHHHHHHHHHEEEEEEEEEHHHHCCCCCCCCHHHCCHHCCCCCC
RGGKKNLYTSLARRISVQREDKDPLILVTNLLDEPAEMIAQLYKSRWEIELFFKWIKQRL
CCCCHHHHHHHHHHHHCCCCCCCCEEEEHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHH
KIKKILGKSENAVKIQLITAIIAYLLVFLFKNSHNQTTPLYLMLVWIKCNLEKPVLFNAF
HHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEEEEECCCCCEEEEEE
YLDKKPMSPEVKYLLETKT
EECCCCCCHHHHEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]