Click here to switch to the map view.

The map label for this gene is 148358485

Identifier: 148358485

GI number: 148358485

Start: 377462

End: 378172

Strand: Direct

Name: 148358485

Synonym: LPC_0351

Alternate gene names: NA

Gene position: 377462-378172 (Clockwise)

Preceding gene: 148358484

Following gene: 148358486

Centisome position: 10.55

GC content: 36.43

Gene sequence:

>711_bases
ATGCATAAAAAATACAACTACTACAGTCTTGAAAAAGAAAAAAAAACATTCTGGCAACATATACTGGATATTCTGAAGGC
CCCATTTAGGCTACCTGGTTGGGTCGTTTCTTTTTTCTTGGCACGAAATATTACTCATGTGGCATTAAATCCTAATAATA
TTCCGCAACAACGTTTAATACATCTTACTAAAACAAGCAATCGTCCAGAGGATGATATTGTTGTCATTAATTTCAAAAAA
CGGCCGCCTCACAAATGGTTTAATGACACGCTGATTAAAATAGCCAATACGATTGCGGCTCTTCCTTTTGTAACACCAAG
ATTACGTACAAGATTACATTACGATAATGAGAATGACATCAATCATGTGAACAAGTTGCTTGCCGAGATCGATGCGCTTG
TTCAGGGCAAATCAAAACAAAAGTATTGCAAAGGCAGGGCATTCGATTGGTCAAAAATTCATCTGAAGGGATTGGAGTTC
CTGGACCCTAAAATGAGAGGGTATGTTTATGAACAACTGCATGAAAAATATGGTTATGTCTCATATACAACAAAACGCGA
ACCTAATATTGAATTTTTCACCTTAAAAACTCCTGATGGATCTGAATTGGATTCAGTGCAAGTTACAGGTGAAGATGAAG
AAAAAAAACCAATGAGGGAGCGCAAGTTTATTATTACCTGTATTGCGCGGGATCAAAATTTCATTAATTGA

Upstream 100 bases:

>100_bases
AAAATGCGCACAATTTTTACTATTTGTTTGCATATATATTAACCCTATAGGATTGCAATAGATAGTGCCACTTTGATTTA
ATTAATTTTTAGAAGTTAAT

Downstream 100 bases:

>100_bases
ATAAAGGATTTAAACTATACGGCAAAAAATCTGGGTGCCACAGCCATCAGTTTCAACTACAGAGGCGTGGATTACAGTCG
CGGTCTTGTCTGGACAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MHKKYNYYSLEKEKKTFWQHILDILKAPFRLPGWVVSFFLARNITHVALNPNNIPQQRLIHLTKTSNRPEDDIVVINFKK
RPPHKWFNDTLIKIANTIAALPFVTPRLRTRLHYDNENDINHVNKLLAEIDALVQGKSKQKYCKGRAFDWSKIHLKGLEF
LDPKMRGYVYEQLHEKYGYVSYTTKREPNIEFFTLKTPDGSELDSVQVTGEDEEKKPMRERKFIITCIARDQNFIN

Sequences:

>Translated_236_residues
MHKKYNYYSLEKEKKTFWQHILDILKAPFRLPGWVVSFFLARNITHVALNPNNIPQQRLIHLTKTSNRPEDDIVVINFKK
RPPHKWFNDTLIKIANTIAALPFVTPRLRTRLHYDNENDINHVNKLLAEIDALVQGKSKQKYCKGRAFDWSKIHLKGLEF
LDPKMRGYVYEQLHEKYGYVSYTTKREPNIEFFTLKTPDGSELDSVQVTGEDEEKKPMRERKFIITCIARDQNFIN
>Mature_236_residues
MHKKYNYYSLEKEKKTFWQHILDILKAPFRLPGWVVSFFLARNITHVALNPNNIPQQRLIHLTKTSNRPEDDIVVINFKK
RPPHKWFNDTLIKIANTIAALPFVTPRLRTRLHYDNENDINHVNKLLAEIDALVQGKSKQKYCKGRAFDWSKIHLKGLEF
LDPKMRGYVYEQLHEKYGYVSYTTKREPNIEFFTLKTPDGSELDSVQVTGEDEEKKPMRERKFIITCIARDQNFIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27962; Mature: 27962

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKKYNYYSLEKEKKTFWQHILDILKAPFRLPGWVVSFFLARNITHVALNPNNIPQQRLI
CCCCCCCEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHEE
HLTKTSNRPEDDIVVINFKKRPPHKWFNDTLIKIANTIAALPFVTPRLRTRLHYDNENDI
EEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHEECCCCCCCH
NHVNKLLAEIDALVQGKSKQKYCKGRAFDWSKIHLKGLEFLDPKMRGYVYEQLHEKYGYV
HHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHEEECCCHHCCHHHHHHHHHHHHHHCCCE
SYTTKREPNIEFFTLKTPDGSELDSVQVTGEDEEKKPMRERKFIITCIARDQNFIN
EEECCCCCCEEEEEEECCCCCCCCEEEECCCCHHHCHHHHCCEEEEEEECCCCCCC
>Mature Secondary Structure
MHKKYNYYSLEKEKKTFWQHILDILKAPFRLPGWVVSFFLARNITHVALNPNNIPQQRLI
CCCCCCCEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHEE
HLTKTSNRPEDDIVVINFKKRPPHKWFNDTLIKIANTIAALPFVTPRLRTRLHYDNENDI
EEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHEECCCCCCCH
NHVNKLLAEIDALVQGKSKQKYCKGRAFDWSKIHLKGLEFLDPKMRGYVYEQLHEKYGYV
HHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHEEECCCHHCCHHHHHHHHHHHHHHCCCE
SYTTKREPNIEFFTLKTPDGSELDSVQVTGEDEEKKPMRERKFIITCIARDQNFIN
EEECCCCCCEEEEEEECCCCCCCCEEEECCCCHHHCHHHHCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA