Click here to switch to the map view.

The map label for this gene is sdbA

Identifier: 148358486

GI number: 148358486

Start: 378239

End: 380812

Strand: Direct

Name: sdbA

Synonym: LPC_0352

Alternate gene names: NA

Gene position: 378239-380812 (Clockwise)

Preceding gene: 148358485

Following gene: 148358487

Centisome position: 10.58

GC content: 40.25

Gene sequence:

>2574_bases
GTGGATTACAGTCGCGGTCTTGTCTGGACAGAAAATAATCTTGTCGACGATATTCTGGCTCAGGTGCAAAGGCTAATTAG
CCTTGGTGCCGACCCTAAGAACATCTGCCTTGATGGTATGTGTATAGGTGGGGCGGTAGCAACAATTGCCGCAGCAAAAC
TTCATGAGAAGGGCATGAAAGTCAAGTTGAATAATGAACGCTCTTTTACTTCTCTTTCTTCTCTAGTATTTGGTTTTATT
GTACCTGAATTGCAAACAGCAAATTGGTGGAGCCCTTTGACTTATGGTCGCTTCCTACTGGCTGGTGTAGTTTATGCTTT
ACTCACGCCTTTAATTTGGCTGGCAGGCTGGCCAGTTGATGTGACCAAAGCCTGGAATAGAATACCTGCTCAGGATAAAA
TGTATTCTGTTGTGCGGGATAAAGACAATGGCTTGTACGATGGAGTAATTCACGATCACTTCTGTTCCATTGCGTCGTTG
GTTGATTCTCAAATTAATTCTATTTTATACAAATTATCCACTGATCAGCTGCTTACTGAGGAAGAAAAACAAATTTTGTG
TGATGATCAGCTTTCTCACCATTTTAAACCAAGTCAAAGTGTTTTAAAAAATCCAAAATACAAAGGCCCGCATTTTATTT
CCCGACAAGATTTGGTAGCTGAGCTTGGTCATCGAGAGGAATATACCAATCATGATTATTTCCTTGACCGCTTGCGGGAA
AAATTTCAATTGGATCGTACAATACGGCCAGTGGCTTTGGCTGAAGATGGGGAAAAGGATATAGATGGGATTCCACCGCA
ACTATCTAATCATAAAGAGCGTCCCTTAATTATTGCCAGCAGTGGAGGAACAGGGCATATCTCTGCCACTCATGGCATCA
TTAATGATTTACAGAGTAAAACAGATAATGTTGTCATTACGCAGCATCATGCGGAGCTCTACAAAAACAAGCCCTTCTCA
ATTACATCTGTTCTGATTCGTATTGGTGTTTGGTTGACCTCCCTTCCTGTCCTGGAGGACATACTGAAAGGAGTTATGAG
GTTTATCGGATATCCCGTTTTACCGAGCTCCTCCATCTTTTGGGATCAAATGTCTAAAATACAGCAAAGTGAAACTAAAA
AAGAAAATGGAATTGAAACAGGCAGAACCCGTCCTTATGTGGACATGTTGTTGGATATATACCCAGAGGGATATGAATAC
ACAGCATTCAATAACGCGACTCACTTGACTTCCAGTATTGAAGACATTCAAACGATGATAAGCTTCAAGGGGCATGTTGA
AGAGGATAACAGGAATATAGTCTATCAAAATATATTACAACGCCTTATGCATGCGGCGAAACAGAGTACTCCTTACACAA
GATTAATTTCCACACAGGCGCTTTCTTTGGGAGCTATTTGCGATGCCGTTAAATACTACAATACGGTATTTTTGCCTGTA
TACAATGCTGAAAGAGGAACCTCCTATCAGCCTATTACCATTGATCAGTATATGACCGATTTGCCTTCACTGGGTTGTAT
TCATTTTATGAATAATTTGGAGGAGCTCACATCAGAGCAAAGGCAATTGATGGAGATACATGCAGTAAATATGAGTGAAC
CATTTAAAGAGGCGCATTTTGGTAAAGAACAAGGCTTTAAAGCGGTTCATAACATTGACCCACGTAATAACCCAATGATT
CGCAATGCCTTTAAAGATCTTTCATTGACAAAATACCTGGATAAGACACAGTCATTTGATTTGCACTTTAATGTTTATAA
AAAGGAAAAACAAAATGCACTGCCAGTACTGAATGGTAAAGAAAAAATTACAATCAAACCGCATGCTAAAATTGCTTCCA
TCATGATAGGCTCTCTGGCGGCAAATGCTTCAGCTGATTATGCGCAGTATTTATTGAATCAGGGGTATGATCATATTTTT
CTTTTCGGCGGGCTTAATGATTCCATTGCCGCACGCATCGATCAGATCATCAATTCTTACCCTGACTCCAGGCATGATGA
GATACGTAAGAAAATTATTCTCCTGGGGAATCAATCTGATGTTGAAATGGCACCGATAATGACCAGAAGTAACTGTGTGG
TTATCCGTGGGGGTGGTTTAAGTGTCATGGAGCAAATGGCTATGCCCATTATGGATGAGAAAATTGTATTACTACATCAT
GAAGATAATGAAGAGGGGCCTTTAACGTCTGGTCTCAGTTGGGAGGATGGGAATGCCGATAAATTAATCGAGTATCTATC
CGAAAAAGGGGCATATGCTAAAAAAACATCACCTGGCTTGTGTTCTGGCCATCTCAATGAGGCAGAAAAGGATTTTGAAA
AGAAATATATTACCCAACTAAAATCGAAGGGAACCAAGGAAAAAGTAGATTTAACCATTCCTCAGCAAAAGAAGCCTCCC
CTGAAAAAAGAGTGGGGTAGAAAAACAGGTTATACTGAACTCGGGCACGTATTATCCCATCAACATAGGTTTTTTGAAAC
GATTCCTGAAGTAAGAGAGCCATTCTGTTCTAAGGAAGATTTACATCATCATGAGCTTTCCAGTCAAAGTTTGGTTAGTG
TAACAGTTGGTTGA

Upstream 100 bases:

>100_bases
CTGTATTGCGCGGGATCAAAATTTCATTAATTGAATAAAGGATTTAAACTATACGGCAAAAAATCTGGGTGCCACAGCCA
TCAGTTTCAACTACAGAGGC

Downstream 100 bases:

>100_bases
TAAAATATGCCTCTAATCATCGAGGCTCGTTTTAGTGCGGCCTTCTCTGAAACTTGTCTGCTCAGGATAGTATCAATTTG
TGATTGGAATGCGTGCTGAA

Product: Dot/Icm system substrate protein SdbA

Products: NA

Alternate protein names: SidB Homolog Substrate Of Dot/Icm System

Number of amino acids: Translated: 857; Mature: 857

Protein sequence:

>857_residues
MDYSRGLVWTENNLVDDILAQVQRLISLGADPKNICLDGMCIGGAVATIAAAKLHEKGMKVKLNNERSFTSLSSLVFGFI
VPELQTANWWSPLTYGRFLLAGVVYALLTPLIWLAGWPVDVTKAWNRIPAQDKMYSVVRDKDNGLYDGVIHDHFCSIASL
VDSQINSILYKLSTDQLLTEEEKQILCDDQLSHHFKPSQSVLKNPKYKGPHFISRQDLVAELGHREEYTNHDYFLDRLRE
KFQLDRTIRPVALAEDGEKDIDGIPPQLSNHKERPLIIASSGGTGHISATHGIINDLQSKTDNVVITQHHAELYKNKPFS
ITSVLIRIGVWLTSLPVLEDILKGVMRFIGYPVLPSSSIFWDQMSKIQQSETKKENGIETGRTRPYVDMLLDIYPEGYEY
TAFNNATHLTSSIEDIQTMISFKGHVEEDNRNIVYQNILQRLMHAAKQSTPYTRLISTQALSLGAICDAVKYYNTVFLPV
YNAERGTSYQPITIDQYMTDLPSLGCIHFMNNLEELTSEQRQLMEIHAVNMSEPFKEAHFGKEQGFKAVHNIDPRNNPMI
RNAFKDLSLTKYLDKTQSFDLHFNVYKKEKQNALPVLNGKEKITIKPHAKIASIMIGSLAANASADYAQYLLNQGYDHIF
LFGGLNDSIAARIDQIINSYPDSRHDEIRKKIILLGNQSDVEMAPIMTRSNCVVIRGGGLSVMEQMAMPIMDEKIVLLHH
EDNEEGPLTSGLSWEDGNADKLIEYLSEKGAYAKKTSPGLCSGHLNEAEKDFEKKYITQLKSKGTKEKVDLTIPQQKKPP
LKKEWGRKTGYTELGHVLSHQHRFFETIPEVREPFCSKEDLHHHELSSQSLVSVTVG

Sequences:

>Translated_857_residues
MDYSRGLVWTENNLVDDILAQVQRLISLGADPKNICLDGMCIGGAVATIAAAKLHEKGMKVKLNNERSFTSLSSLVFGFI
VPELQTANWWSPLTYGRFLLAGVVYALLTPLIWLAGWPVDVTKAWNRIPAQDKMYSVVRDKDNGLYDGVIHDHFCSIASL
VDSQINSILYKLSTDQLLTEEEKQILCDDQLSHHFKPSQSVLKNPKYKGPHFISRQDLVAELGHREEYTNHDYFLDRLRE
KFQLDRTIRPVALAEDGEKDIDGIPPQLSNHKERPLIIASSGGTGHISATHGIINDLQSKTDNVVITQHHAELYKNKPFS
ITSVLIRIGVWLTSLPVLEDILKGVMRFIGYPVLPSSSIFWDQMSKIQQSETKKENGIETGRTRPYVDMLLDIYPEGYEY
TAFNNATHLTSSIEDIQTMISFKGHVEEDNRNIVYQNILQRLMHAAKQSTPYTRLISTQALSLGAICDAVKYYNTVFLPV
YNAERGTSYQPITIDQYMTDLPSLGCIHFMNNLEELTSEQRQLMEIHAVNMSEPFKEAHFGKEQGFKAVHNIDPRNNPMI
RNAFKDLSLTKYLDKTQSFDLHFNVYKKEKQNALPVLNGKEKITIKPHAKIASIMIGSLAANASADYAQYLLNQGYDHIF
LFGGLNDSIAARIDQIINSYPDSRHDEIRKKIILLGNQSDVEMAPIMTRSNCVVIRGGGLSVMEQMAMPIMDEKIVLLHH
EDNEEGPLTSGLSWEDGNADKLIEYLSEKGAYAKKTSPGLCSGHLNEAEKDFEKKYITQLKSKGTKEKVDLTIPQQKKPP
LKKEWGRKTGYTELGHVLSHQHRFFETIPEVREPFCSKEDLHHHELSSQSLVSVTVG
>Mature_857_residues
MDYSRGLVWTENNLVDDILAQVQRLISLGADPKNICLDGMCIGGAVATIAAAKLHEKGMKVKLNNERSFTSLSSLVFGFI
VPELQTANWWSPLTYGRFLLAGVVYALLTPLIWLAGWPVDVTKAWNRIPAQDKMYSVVRDKDNGLYDGVIHDHFCSIASL
VDSQINSILYKLSTDQLLTEEEKQILCDDQLSHHFKPSQSVLKNPKYKGPHFISRQDLVAELGHREEYTNHDYFLDRLRE
KFQLDRTIRPVALAEDGEKDIDGIPPQLSNHKERPLIIASSGGTGHISATHGIINDLQSKTDNVVITQHHAELYKNKPFS
ITSVLIRIGVWLTSLPVLEDILKGVMRFIGYPVLPSSSIFWDQMSKIQQSETKKENGIETGRTRPYVDMLLDIYPEGYEY
TAFNNATHLTSSIEDIQTMISFKGHVEEDNRNIVYQNILQRLMHAAKQSTPYTRLISTQALSLGAICDAVKYYNTVFLPV
YNAERGTSYQPITIDQYMTDLPSLGCIHFMNNLEELTSEQRQLMEIHAVNMSEPFKEAHFGKEQGFKAVHNIDPRNNPMI
RNAFKDLSLTKYLDKTQSFDLHFNVYKKEKQNALPVLNGKEKITIKPHAKIASIMIGSLAANASADYAQYLLNQGYDHIF
LFGGLNDSIAARIDQIINSYPDSRHDEIRKKIILLGNQSDVEMAPIMTRSNCVVIRGGGLSVMEQMAMPIMDEKIVLLHH
EDNEEGPLTSGLSWEDGNADKLIEYLSEKGAYAKKTSPGLCSGHLNEAEKDFEKKYITQLKSKGTKEKVDLTIPQQKKPP
LKKEWGRKTGYTELGHVLSHQHRFFETIPEVREPFCSKEDLHHHELSSQSLVSVTVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 96860; Mature: 96860

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYSRGLVWTENNLVDDILAQVQRLISLGADPKNICLDGMCIGGAVATIAAAKLHEKGMK
CCCCCCCEEECCCHHHHHHHHHHHHHHCCCCHHHHEECCEEHHHHHHHHHHHHHHHCCCE
VKLNNERSFTSLSSLVFGFIVPELQTANWWSPLTYGRFLLAGVVYALLTPLIWLAGWPVD
EEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
VTKAWNRIPAQDKMYSVVRDKDNGLYDGVIHDHFCSIASLVDSQINSILYKLSTDQLLTE
HHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
EEKQILCDDQLSHHFKPSQSVLKNPKYKGPHFISRQDLVAELGHREEYTNHDYFLDRLRE
HHHHHHCCHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHHHCCHHHCCCHHHHHHHHHH
KFQLDRTIRPVALAEDGEKDIDGIPPQLSNHKERPLIIASSGGTGHISATHGIINDLQSK
HHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEHHHHHHHHHHCC
TDNVVITQHHAELYKNKPFSITSVLIRIGVWLTSLPVLEDILKGVMRFIGYPVLPSSSIF
CCCEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
WDQMSKIQQSETKKENGIETGRTRPYVDMLLDIYPEGYEYTAFNNATHLTSSIEDIQTMI
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHH
SFKGHVEEDNRNIVYQNILQRLMHAAKQSTPYTRLISTQALSLGAICDAVKYYNTVFLPV
HHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEE
YNAERGTSYQPITIDQYMTDLPSLGCIHFMNNLEELTSEQRQLMEIHAVNMSEPFKEAHF
EECCCCCCCCCEEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHC
GKEQGFKAVHNIDPRNNPMIRNAFKDLSLTKYLDKTQSFDLHFNVYKKEKQNALPVLNGK
CHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHCCCCCCCCCCCC
EKITIKPHAKIASIMIGSLAANASADYAQYLLNQGYDHIFLFGGLNDSIAARIDQIINSY
CEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHC
PDSRHDEIRKKIILLGNQSDVEMAPIMTRSNCVVIRGGGLSVMEQMAMPIMDEKIVLLHH
CCCHHHHHHHHEEEECCCCCCEECCEEECCCEEEEECCCHHHHHHHHCCCCCCCEEEEEE
EDNEEGPLTSGLSWEDGNADKLIEYLSEKGAYAKKTSPGLCSGHLNEAEKDFEKKYITQL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
KSKGTKEKVDLTIPQQKKPPLKKEWGRKTGYTELGHVLSHQHRFFETIPEVREPFCSKED
HHCCCCCEEEEECCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
LHHHELSSQSLVSVTVG
CHHHHCCCCCEEEEECC
>Mature Secondary Structure
MDYSRGLVWTENNLVDDILAQVQRLISLGADPKNICLDGMCIGGAVATIAAAKLHEKGMK
CCCCCCCEEECCCHHHHHHHHHHHHHHCCCCHHHHEECCEEHHHHHHHHHHHHHHHCCCE
VKLNNERSFTSLSSLVFGFIVPELQTANWWSPLTYGRFLLAGVVYALLTPLIWLAGWPVD
EEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
VTKAWNRIPAQDKMYSVVRDKDNGLYDGVIHDHFCSIASLVDSQINSILYKLSTDQLLTE
HHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
EEKQILCDDQLSHHFKPSQSVLKNPKYKGPHFISRQDLVAELGHREEYTNHDYFLDRLRE
HHHHHHCCHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHHHCCHHHCCCHHHHHHHHHH
KFQLDRTIRPVALAEDGEKDIDGIPPQLSNHKERPLIIASSGGTGHISATHGIINDLQSK
HHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEHHHHHHHHHHCC
TDNVVITQHHAELYKNKPFSITSVLIRIGVWLTSLPVLEDILKGVMRFIGYPVLPSSSIF
CCCEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
WDQMSKIQQSETKKENGIETGRTRPYVDMLLDIYPEGYEYTAFNNATHLTSSIEDIQTMI
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHH
SFKGHVEEDNRNIVYQNILQRLMHAAKQSTPYTRLISTQALSLGAICDAVKYYNTVFLPV
HHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEE
YNAERGTSYQPITIDQYMTDLPSLGCIHFMNNLEELTSEQRQLMEIHAVNMSEPFKEAHF
EECCCCCCCCCEEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHC
GKEQGFKAVHNIDPRNNPMIRNAFKDLSLTKYLDKTQSFDLHFNVYKKEKQNALPVLNGK
CHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHCCCCCCCCCCCC
EKITIKPHAKIASIMIGSLAANASADYAQYLLNQGYDHIFLFGGLNDSIAARIDQIINSY
CEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHC
PDSRHDEIRKKIILLGNQSDVEMAPIMTRSNCVVIRGGGLSVMEQMAMPIMDEKIVLLHH
CCCHHHHHHHHEEEECCCCCCEECCEEECCCEEEEECCCHHHHHHHHCCCCCCCEEEEEE
EDNEEGPLTSGLSWEDGNADKLIEYLSEKGAYAKKTSPGLCSGHLNEAEKDFEKKYITQL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
KSKGTKEKVDLTIPQQKKPPLKKEWGRKTGYTELGHVLSHQHRFFETIPEVREPFCSKED
HHCCCCCEEEEECCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
LHHHELSSQSLVSVTVG
CHHHHCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA