| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is proP [H]
Identifier: 148285055
GI number: 148285055
Start: 1891730
End: 1892983
Strand: Direct
Name: proP [H]
Synonym: OTBS_1955
Alternate gene names: 148285055
Gene position: 1891730-1892983 (Clockwise)
Preceding gene: 148285054
Following gene: 148285056
Centisome position: 88.94
GC content: 30.22
Gene sequence:
>1254_bases ATGAACAAGAAGGTTCTAATTTTATCTATGCTTGTAACTTTAGCTCATTATTATGATTATCATTTATTTGGCTTATTAGC TTCTCAAATTTCTGAGTGTTTTATTACTAAAAGTGATAGTATTACACAATTAAGGAATACTTATCTTATTATGGGAATAG CTATTTTTGGTAAAGCAATTGGAGCTGTTATTTTGGGGAGAATAGGTGATCTTTATGGTCGAGATGCTACTTTTAGTATA AGCTTAATAGGAACAGCTAGTGGGTCGTTATTAATTGCTATTTTACCATGTTATAATATCATTGGAGTGTTATCAGTTTT CGGCTTATTATTGGCTAGAATTTCTATATGTATGTTTACTTCGCCAGGAACTGATGGAGTAAGATTATATGTATATGAAA CTATAGGTAATAAATATAAATGCTTAGGTGGAGGTATAGTTAATGCTTCAACAAACTGTGGGTCATTTATTGCTTCTATA TCAGCACTGTTTTTTACTTTAGATATCATGCCTAAATATAGCTGGCGCTTTGCTTTTATACTTGGAGGACTATTTGGAGT ATGTGTGGTAATTATACGCAGGATGTTTATTCAATCTATTCAAGATGATCAAGTAAAAAATTCTCAGTATCATGAATATA AAGATTGTTCAATTTTGCAGATTGTGCGTAAGAATTTAAATGTATTTATTTTAGCTGTATTAATAGCTGGTACTATTGGT AGCACTAATCAATTTTGCACGATATTTTTTGGTACCTATATTTTTAAAATATTGCAATATTTAGATGAAGCTACAGCGAA ATATTATGTTACGCTTGGAATCGCAATACAGATGTTATTTGCAATTATAGGAGGATATACTGCTGATATTATAGGTAAAA AATTAGTTTCTTCTATTGCTTTTTGTTGCTTAGGAATAGCTGTCATTATTATGGCTTATATGATAAATTTAGGCAACTTT ATTCCAGTATTATACCTGACTATATGTATGCTTGTACCGTTTTTAACTATGCCAGCTTTAGTTTTTCTTAAGGAAAGTAT TCCTAAGACTATAAGATATAGATTATTTAGTGCTGCGCATGCTTGTGGATCAAGCTTAATTTCTGGTCCAACAACGTTTG TTGCGACTAGCTTATATCAGATAGGTAGTGCATGGTGGCCAATGATGTATTTTTTAGTAATAATAGTTATTATGATTACA GTAATTTATTTGCTTGATTATTGTAGCAAAAATCAGCAAAATCTAAGTTTCTAA
Upstream 100 bases:
>100_bases TAAGGGAATAAATAGAAAGGGAATGAGCTATGTAAAAAGTATCATGATGCAACTTTTAAGTTAGTGTCATGATATTCAGT ATTTTAGGAGAATAAGATTT
Downstream 100 bases:
>100_bases TTTAAATGTATGGTAGTGGTAAAGTTGTATGGGTGTAATAAAATATTTGTCTGATACTACTATAAACCGTATAGCTGCTG GAGAGGTAGTAGAGCGTCCT
Product: proline/betaine transporter
Products: Proton [Cytoplasm]; 2-oxoglutarate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MNKKVLILSMLVTLAHYYDYHLFGLLASQISECFITKSDSITQLRNTYLIMGIAIFGKAIGAVILGRIGDLYGRDATFSI SLIGTASGSLLIAILPCYNIIGVLSVFGLLLARISICMFTSPGTDGVRLYVYETIGNKYKCLGGGIVNASTNCGSFIASI SALFFTLDIMPKYSWRFAFILGGLFGVCVVIIRRMFIQSIQDDQVKNSQYHEYKDCSILQIVRKNLNVFILAVLIAGTIG STNQFCTIFFGTYIFKILQYLDEATAKYYVTLGIAIQMLFAIIGGYTADIIGKKLVSSIAFCCLGIAVIIMAYMINLGNF IPVLYLTICMLVPFLTMPALVFLKESIPKTIRYRLFSAAHACGSSLISGPTTFVATSLYQIGSAWWPMMYFLVIIVIMIT VIYLLDYCSKNQQNLSF
Sequences:
>Translated_417_residues MNKKVLILSMLVTLAHYYDYHLFGLLASQISECFITKSDSITQLRNTYLIMGIAIFGKAIGAVILGRIGDLYGRDATFSI SLIGTASGSLLIAILPCYNIIGVLSVFGLLLARISICMFTSPGTDGVRLYVYETIGNKYKCLGGGIVNASTNCGSFIASI SALFFTLDIMPKYSWRFAFILGGLFGVCVVIIRRMFIQSIQDDQVKNSQYHEYKDCSILQIVRKNLNVFILAVLIAGTIG STNQFCTIFFGTYIFKILQYLDEATAKYYVTLGIAIQMLFAIIGGYTADIIGKKLVSSIAFCCLGIAVIIMAYMINLGNF IPVLYLTICMLVPFLTMPALVFLKESIPKTIRYRLFSAAHACGSSLISGPTTFVATSLYQIGSAWWPMMYFLVIIVIMIT VIYLLDYCSKNQQNLSF >Mature_417_residues MNKKVLILSMLVTLAHYYDYHLFGLLASQISECFITKSDSITQLRNTYLIMGIAIFGKAIGAVILGRIGDLYGRDATFSI SLIGTASGSLLIAILPCYNIIGVLSVFGLLLARISICMFTSPGTDGVRLYVYETIGNKYKCLGGGIVNASTNCGSFIASI SALFFTLDIMPKYSWRFAFILGGLFGVCVVIIRRMFIQSIQDDQVKNSQYHEYKDCSILQIVRKNLNVFILAVLIAGTIG STNQFCTIFFGTYIFKILQYLDEATAKYYVTLGIAIQMLFAIIGGYTADIIGKKLVSSIAFCCLGIAVIIMAYMINLGNF IPVLYLTICMLVPFLTMPALVFLKESIPKTIRYRLFSAAHACGSSLISGPTTFVATSLYQIGSAWWPMMYFLVIIVIMIT VIYLLDYCSKNQQNLSF
Specific function: May be a proton symporter invoved in the uptake of osmolytes such as proline and glycine betaine [H]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1788942, Length=390, Percent_Identity=24.8717948717949, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1790550, Length=421, Percent_Identity=19.7149643705463, Blast_Score=62, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46099; Mature: 46099
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKVLILSMLVTLAHYYDYHLFGLLASQISECFITKSDSITQLRNTYLIMGIAIFGKAI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH GAVILGRIGDLYGRDATFSISLIGTASGSLLIAILPCYNIIGVLSVFGLLLARISICMFT HHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SPGTDGVRLYVYETIGNKYKCLGGGIVNASTNCGSFIASISALFFTLDIMPKYSWRFAFI CCCCCCEEEEEEECCCCCEEEECCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH LGGLFGVCVVIIRRMFIQSIQDDQVKNSQYHEYKDCSILQIVRKNLNVFILAVLIAGTIG HHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCC STNQFCTIFFGTYIFKILQYLDEATAKYYVTLGIAIQMLFAIIGGYTADIIGKKLVSSIA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH FCCLGIAVIIMAYMINLGNFIPVLYLTICMLVPFLTMPALVFLKESIPKTIRYRLFSAAH HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ACGSSLISGPTTFVATSLYQIGSAWWPMMYFLVIIVIMITVIYLLDYCSKNQQNLSF HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNKKVLILSMLVTLAHYYDYHLFGLLASQISECFITKSDSITQLRNTYLIMGIAIFGKAI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH GAVILGRIGDLYGRDATFSISLIGTASGSLLIAILPCYNIIGVLSVFGLLLARISICMFT HHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SPGTDGVRLYVYETIGNKYKCLGGGIVNASTNCGSFIASISALFFTLDIMPKYSWRFAFI CCCCCCEEEEEEECCCCCEEEECCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH LGGLFGVCVVIIRRMFIQSIQDDQVKNSQYHEYKDCSILQIVRKNLNVFILAVLIAGTIG HHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCC STNQFCTIFFGTYIFKILQYLDEATAKYYVTLGIAIQMLFAIIGGYTADIIGKKLVSSIA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH FCCLGIAVIIMAYMINLGNFIPVLYLTICMLVPFLTMPALVFLKESIPKTIRYRLFSAAH HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ACGSSLISGPTTFVATSLYQIGSAWWPMMYFLVIIVIMITVIYLLDYCSKNQQNLSF HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 2-oxoglutarate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 2-oxoglutarate [Periplasm] = Proton [Cytoplasm] + 2-oxoglutarate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10708580 [H]