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The map label for this gene is perM [C]

Identifier: 148284186

GI number: 148284186

Start: 341834

End: 342880

Strand: Direct

Name: perM [C]

Synonym: OTBS_0348

Alternate gene names: 148284186

Gene position: 341834-342880 (Clockwise)

Preceding gene: 148284185

Following gene: 148284217

Centisome position: 16.07

GC content: 25.98

Gene sequence:

>1047_bases
ATGATAGTAAAAACAAATAACTACATACTGTATTTTATAATTACAGCAATAATATTATCGTTATGTTATTTTTTAATTAA
TATAGCTACTCCATTTTTAGCAGCTGCAGTTTTAGCTTATATACTAAACCCAATAGTAGAAATATTACAAATAAAACTTA
AATTATCACGAAACTTAATAGTATCCATAGTATTTGTAGTATTTTTAACTATTCTAATTGTAGCAGCACTATTACTAATG
CCAATTATCTATAAACAAGCAGCACTATTAGTTGCCAATATTCCAGCATATAGAGCAACCATACAAAGCTTTATAGAATC
TAATAACAGTATTAACAATCTTGACCTTAATCATAATATTAAACACATACTTACTGAAATAATAAATAGTTGGATTCTGA
TAATAACTCATATTTTAAATCACGCTTGGCAATATACCATTACTACCATACATAGCGTTGTTACAGCAGCATTTACTGGT
ATATTACTATTTTATTTTCTCAGAGACTGGAAGCTAATTATCAATAGCTGCAAGTCTATACTTCCTCAGCAAAGCCTTTC
ATATATTAATAAAATAGTTAATAGCATAAATACTTCGTTATTAGCATATGCTCAGGGACAACTAAATACTTGTCTAATAT
TATCAATTTTTTATAGCATCTCACTATTATTAATTAATTTAGATTTTTCTTTAACTATAGGATTATTTTCTGGTACTATA
ATTATAATACCTTTAATTGGAACAATAATCTCAACAAGCATAGCATTAATAACATGTTTTTCTCAATTTGGTTTATCGTT
CAAGTTACTTTATGTAATTATGATTTATATCATCAGTCACATTTTAGAAAGTCACTTTCTTACTCCTAAACTTATAGGCA
GCAAAGTTGGCTTACACCCTATATGGATATATTTTTCAGTATTAACCTGTAGCTATTATTTAGGATTTACAGGAATATTT
TTGGCTATTCCGTTGGCTATTATAATCAAAATTATATGTCAAACAATAATAGATACTTATAAGTTAAATAACTTCAATTA
TAAATAA

Upstream 100 bases:

>100_bases
TGTAATTAAAAATGCATTTCATTCATGGTAAAATTTTTCTTAAACTATATTCCTCATTTTACAATTCAATATTACTTAAT
TAACTGAAGATCATTGTTAT

Downstream 100 bases:

>100_bases
AAAGCTATATCATCTCAATGCTGCATATATGTTAAGATTTAATAATATCTGTTTTAAAGCTACTGTTAAATTATGTATCA
TTCCGTCAGTATGAAATGGA

Product: putative permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MIVKTNNYILYFIITAIILSLCYFLINIATPFLAAAVLAYILNPIVEILQIKLKLSRNLIVSIVFVVFLTILIVAALLLM
PIIYKQAALLVANIPAYRATIQSFIESNNSINNLDLNHNIKHILTEIINSWILIITHILNHAWQYTITTIHSVVTAAFTG
ILLFYFLRDWKLIINSCKSILPQQSLSYINKIVNSINTSLLAYAQGQLNTCLILSIFYSISLLLINLDFSLTIGLFSGTI
IIIPLIGTIISTSIALITCFSQFGLSFKLLYVIMIYIISHILESHFLTPKLIGSKVGLHPIWIYFSVLTCSYYLGFTGIF
LAIPLAIIIKIICQTIIDTYKLNNFNYK

Sequences:

>Translated_348_residues
MIVKTNNYILYFIITAIILSLCYFLINIATPFLAAAVLAYILNPIVEILQIKLKLSRNLIVSIVFVVFLTILIVAALLLM
PIIYKQAALLVANIPAYRATIQSFIESNNSINNLDLNHNIKHILTEIINSWILIITHILNHAWQYTITTIHSVVTAAFTG
ILLFYFLRDWKLIINSCKSILPQQSLSYINKIVNSINTSLLAYAQGQLNTCLILSIFYSISLLLINLDFSLTIGLFSGTI
IIIPLIGTIISTSIALITCFSQFGLSFKLLYVIMIYIISHILESHFLTPKLIGSKVGLHPIWIYFSVLTCSYYLGFTGIF
LAIPLAIIIKIICQTIIDTYKLNNFNYK
>Mature_348_residues
MIVKTNNYILYFIITAIILSLCYFLINIATPFLAAAVLAYILNPIVEILQIKLKLSRNLIVSIVFVVFLTILIVAALLLM
PIIYKQAALLVANIPAYRATIQSFIESNNSINNLDLNHNIKHILTEIINSWILIITHILNHAWQYTITTIHSVVTAAFTG
ILLFYFLRDWKLIINSCKSILPQQSLSYINKIVNSINTSLLAYAQGQLNTCLILSIFYSISLLLINLDFSLTIGLFSGTI
IIIPLIGTIISTSIALITCFSQFGLSFKLLYVIMIYIISHILESHFLTPKLIGSKVGLHPIWIYFSVLTCSYYLGFTGIF
LAIPLAIIIKIICQTIIDTYKLNNFNYK

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=324, Percent_Identity=25.9259259259259, Blast_Score=113, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 39220; Mature: 39220

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVKTNNYILYFIITAIILSLCYFLINIATPFLAAAVLAYILNPIVEILQIKLKLSRNLI
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSIVFVVFLTILIVAALLLMPIIYKQAALLVANIPAYRATIQSFIESNNSINNLDLNHNI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCH
KHILTEIINSWILIITHILNHAWQYTITTIHSVVTAAFTGILLFYFLRDWKLIINSCKSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPQQSLSYINKIVNSINTSLLAYAQGQLNTCLILSIFYSISLLLINLDFSLTIGLFSGTI
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHH
IIIPLIGTIISTSIALITCFSQFGLSFKLLYVIMIYIISHILESHFLTPKLIGSKVGLHP
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHH
IWIYFSVLTCSYYLGFTGIFLAIPLAIIIKIICQTIIDTYKLNNFNYK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIVKTNNYILYFIITAIILSLCYFLINIATPFLAAAVLAYILNPIVEILQIKLKLSRNLI
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSIVFVVFLTILIVAALLLMPIIYKQAALLVANIPAYRATIQSFIESNNSINNLDLNHNI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCH
KHILTEIINSWILIITHILNHAWQYTITTIHSVVTAAFTGILLFYFLRDWKLIINSCKSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPQQSLSYINKIVNSINTSLLAYAQGQLNTCLILSIFYSISLLLINLDFSLTIGLFSGTI
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHH
IIIPLIGTIISTSIALITCFSQFGLSFKLLYVIMIYIISHILESHFLTPKLIGSKVGLHP
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHH
IWIYFSVLTCSYYLGFTGIFLAIPLAIIIKIICQTIIDTYKLNNFNYK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]