| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is rhp4
Identifier: 148284185
GI number: 148284185
Start: 341176
End: 341490
Strand: Direct
Name: rhp4
Synonym: OTBS_0346
Alternate gene names: NA
Gene position: 341176-341490 (Clockwise)
Preceding gene: 148284179
Following gene: 148284186
Centisome position: 16.04
GC content: 25.4
Gene sequence:
>315_bases GTGGTTATGCGAATCAGTGATACTAGTGATTCTATCCAAATCTTGCCTAACAGCAATAATTTAGCTGAATTAACAAATTT AGTTTACAGTTATATATTTAACTATAGCAAACGAAATGTATATACACTAATAAATTTTGATTGTAATATACTAAGATCAA TAGTAGATAAGCATTATATATTATCATCTATATGCCAAAGTAATAAAACTAACTTAACTATTGTATATAATAATCAGAAT AAAGGGTTACAGGAACAATTAGATAGCTTAACTCAACAATGTTGCAACAATCTGATAGTAGAATTAATTTTTTAG
Upstream 100 bases:
>100_bases ATATCTTAGTTTTTTAATACCTATACAACAAATACAGCTTGATAATTCAGCTAATGTAATTTATAAATCAGGAATGTAAT ACAATTTTTAAATATATAGG
Downstream 100 bases:
>100_bases ATGGTGATATATTAGGCCTCTTTCGAAACTGGTTAAAGTAGTTCAAAATTATTGCCGATAAATATCGAAATAGACGTAAA AGATTCGGTCTTAGATTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 104; Mature: 104
Protein sequence:
>104_residues MVMRISDTSDSIQILPNSNNLAELTNLVYSYIFNYSKRNVYTLINFDCNILRSIVDKHYILSSICQSNKTNLTIVYNNQN KGLQEQLDSLTQQCCNNLIVELIF
Sequences:
>Translated_104_residues MVMRISDTSDSIQILPNSNNLAELTNLVYSYIFNYSKRNVYTLINFDCNILRSIVDKHYILSSICQSNKTNLTIVYNNQN KGLQEQLDSLTQQCCNNLIVELIF >Mature_104_residues MVMRISDTSDSIQILPNSNNLAELTNLVYSYIFNYSKRNVYTLINFDCNILRSIVDKHYILSSICQSNKTNLTIVYNNQN KGLQEQLDSLTQQCCNNLIVELIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12017; Mature: 12017
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMRISDTSDSIQILPNSNNLAELTNLVYSYIFNYSKRNVYTLINFDCNILRSIVDKHYI CEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHH LSSICQSNKTNLTIVYNNQNKGLQEQLDSLTQQCCNNLIVELIF HHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVMRISDTSDSIQILPNSNNLAELTNLVYSYIFNYSKRNVYTLINFDCNILRSIVDKHYI CEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHH LSSICQSNKTNLTIVYNNQNKGLQEQLDSLTQQCCNNLIVELIF HHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA