Definition Acidiphilium cryptum JF-5 chromosome, complete genome.
Accession NC_009484
Length 3,389,227

Click here to switch to the map view.

The map label for this gene is 148261128

Identifier: 148261128

GI number: 148261128

Start: 2360382

End: 2361311

Strand: Reverse

Name: 148261128

Synonym: Acry_2137

Alternate gene names: NA

Gene position: 2361311-2360382 (Counterclockwise)

Preceding gene: 148261135

Following gene: 148261127

Centisome position: 69.67

GC content: 66.67

Gene sequence:

>930_bases
ATGATGACCTCACAGCAACCGTATCGTTGTCGCACTGCGCTGGCCCTGCAGGGCGGCGGCTCGCACGGCGCCTATGCCTG
GGGTGTTCTCGACGCATTGCTGGCCGCCGGGGAGGTGTTCGACGCCGTCTGCGGTGTTTCCTCCGGCGCCATTCTGGGCA
CGATGGCCGTCCAGGGTTTCGTTCGCGGCGGGGCGGACGGCGCCCGGGCGGCGATGGCGCAGTTCTGGGACCGGGTGGTG
GCGACCAACGTGCTGGCGCCGCTGACGTCGCATCTCGACCGCTGGCTGCCCGGCTTCGAGGTCGGGCGCGAATTCGGCAG
CAACCTTGCAATGCAGGGTATTGCGACGGTTCTCAGCATGTTTGGACACGCGTCGATCAACCCGCTGGGGCAGAATCCGC
TGCGTCCGATCCTGACGGATTTGCTCGATCGTGCCGCCTTGGCCGATCCTTCGGCGCCGCGGCTGTTCATTGCGGCGACC
GCCGTGGAATCGGGGTTGTCACGCATATTCACGAATCAGGACATCACGGTCGACGCCCTTCTGGCTTCCGCCTGCCTGCC
GACCCTGTTTCCGACGGTGCTGATCGATGGAATCGCTTACTGGGACGGGGCGTATTCGGGCAATCCGCCTCTCGGTCCGT
TGCTGGCGCTCGATCCCGAGAGGCTGGTGCTGATTCGGGCGCAGAGCCGGCTTCGGGCCGGCGTGCCGAGCCAGCCGGCC
GATATTCTCAATCGGGTGCAGGAACTCGCCTTCCAGACGGCGATCGACGCTGAATGCGCCCTGCTGCCGCCGACGCTGAC
CTTCATCGAATATCCGGCCGATCGTGCCCTGGCCGGCCTTTCGCCCGAATCGCGGGCCTATGCGGACCGTGCCTTTCTCG
ATCGCCTGTTCGAGGAAGGGCGCGCCGCTTTCCGCGCGAGGGCCGCCTGA

Upstream 100 bases:

>100_bases
TCTTAGGCATTGTCCTGCCCGACGTCAACAAAGACGGCTGAACCGCCGCGTGCCGGCGCGGTTCCGCTTGCCCAACCCAT
ATGCGATTGTGCAGATTGCG

Downstream 100 bases:

>100_bases
CCGCCATGAACAAAGTCTTCGGGCGATGGATCGGCCACAGCCTGTCGGCGCGGCTGCTCTGGCTGACCGTGATCGTGACG
CTGCTTGTCGAGGTCATGAT

Product: patatin

Products: NA

Alternate protein names: Alpha-Beta Hydrolase Family Esterase; Patatin Family Phospholipase; Phospholipase Patatin Family; Serine Protease; FabD/Lysophospholipase-Like Esterase; FabD/Lysophospholipase-Like Protein; Patatin-Like Phospholipase; FabD/Lysophospholipase; Esterase Of Alpha-Beta Hydrolase Superfamily; Esterase; Alpha/Beta Fold Family Hydrolase; Phospholipase

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MMTSQQPYRCRTALALQGGGSHGAYAWGVLDALLAAGEVFDAVCGVSSGAILGTMAVQGFVRGGADGARAAMAQFWDRVV
ATNVLAPLTSHLDRWLPGFEVGREFGSNLAMQGIATVLSMFGHASINPLGQNPLRPILTDLLDRAALADPSAPRLFIAAT
AVESGLSRIFTNQDITVDALLASACLPTLFPTVLIDGIAYWDGAYSGNPPLGPLLALDPERLVLIRAQSRLRAGVPSQPA
DILNRVQELAFQTAIDAECALLPPTLTFIEYPADRALAGLSPESRAYADRAFLDRLFEEGRAAFRARAA

Sequences:

>Translated_309_residues
MMTSQQPYRCRTALALQGGGSHGAYAWGVLDALLAAGEVFDAVCGVSSGAILGTMAVQGFVRGGADGARAAMAQFWDRVV
ATNVLAPLTSHLDRWLPGFEVGREFGSNLAMQGIATVLSMFGHASINPLGQNPLRPILTDLLDRAALADPSAPRLFIAAT
AVESGLSRIFTNQDITVDALLASACLPTLFPTVLIDGIAYWDGAYSGNPPLGPLLALDPERLVLIRAQSRLRAGVPSQPA
DILNRVQELAFQTAIDAECALLPPTLTFIEYPADRALAGLSPESRAYADRAFLDRLFEEGRAAFRARAA
>Mature_309_residues
MMTSQQPYRCRTALALQGGGSHGAYAWGVLDALLAAGEVFDAVCGVSSGAILGTMAVQGFVRGGADGARAAMAQFWDRVV
ATNVLAPLTSHLDRWLPGFEVGREFGSNLAMQGIATVLSMFGHASINPLGQNPLRPILTDLLDRAALADPSAPRLFIAAT
AVESGLSRIFTNQDITVDALLASACLPTLFPTVLIDGIAYWDGAYSGNPPLGPLLALDPERLVLIRAQSRLRAGVPSQPA
DILNRVQELAFQTAIDAECALLPPTLTFIEYPADRALAGLSPESRAYADRAFLDRLFEEGRAAFRARAA

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32735; Mature: 32735

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTSQQPYRCRTALALQGGGSHGAYAWGVLDALLAAGEVFDAVCGVSSGAILGTMAVQGF
CCCCCCCCHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
VRGGADGARAAMAQFWDRVVATNVLAPLTSHLDRWLPGFEVGREFGSNLAMQGIATVLSM
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHH
FGHASINPLGQNPLRPILTDLLDRAALADPSAPRLFIAATAVESGLSRIFTNQDITVDAL
HCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCCCCCHHHHH
LASACLPTLFPTVLIDGIAYWDGAYSGNPPLGPLLALDPERLVLIRAQSRLRAGVPSQPA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEEEHHHHHCCCCCCHH
DILNRVQELAFQTAIDAECALLPPTLTFIEYPADRALAGLSPESRAYADRAFLDRLFEEG
HHHHHHHHHHHHHHCCCCCEECCCHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHH
RAAFRARAA
HHHHHHCCC
>Mature Secondary Structure
MMTSQQPYRCRTALALQGGGSHGAYAWGVLDALLAAGEVFDAVCGVSSGAILGTMAVQGF
CCCCCCCCHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
VRGGADGARAAMAQFWDRVVATNVLAPLTSHLDRWLPGFEVGREFGSNLAMQGIATVLSM
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHH
FGHASINPLGQNPLRPILTDLLDRAALADPSAPRLFIAATAVESGLSRIFTNQDITVDAL
HCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCCCCCHHHHH
LASACLPTLFPTVLIDGIAYWDGAYSGNPPLGPLLALDPERLVLIRAQSRLRAGVPSQPA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEEEHHHHHCCCCCCHH
DILNRVQELAFQTAIDAECALLPPTLTFIEYPADRALAGLSPESRAYADRAFLDRLFEEG
HHHHHHHHHHHHHHCCCCCEECCCHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHH
RAAFRARAA
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA