| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is dbpA [H]
Identifier: 148260838
GI number: 148260838
Start: 2033926
End: 2035650
Strand: Reverse
Name: dbpA [H]
Synonym: Acry_1844
Alternate gene names: 148260838
Gene position: 2035650-2033926 (Counterclockwise)
Preceding gene: 148260839
Following gene: 148260836
Centisome position: 60.06
GC content: 70.2
Gene sequence:
>1725_bases ATGAGCCCCATGCCATTTTATGTTGAGACTCCCGCGCTCCAGCATGCGCTCGCGGCGCGCGGTTATGCCGACCCGACCGC CGTGCAGAGCGCCGTGCTGGAACCCGAGGCCGAAGGACGCGACCTCCTGGTCTCGGCCCAGACCGGCTCGGGCAAGACGG TCGCCTACGGGCTGGCCTTCGCCGCCACGATCCTGGACGAGGACGTGCTGCCGCCGGCCGGCGCGCCGCTCGCGCTCATC ATCGCGCCGACCCGCGAGCTTGCCATCCAGGTTCATGCCGAACTCGCCTGGCTTTACGAGCATACCGGCGCGAGCGTGGT CTCCTGCGTCGGCGGCATGGACCCGCGGCGCGAACAGCGCGCCCTGGCCAGCGGTTGCCATATCGTGGTCGGCACACCGG GCCGCCTGCAGGACCATATCGAGCGCCGGCATCTCGATCTCGGCCGGCTCAGGGTCGTCGTGCTCGACGAGGCCGACGAG ATGCTCGATCTCGGCTTTCGCGACGAACTCGAATTCATCCTCGGCGCGTCTCCCGCGGACCGCCGCACGCTGCTGTTCTC GGCCACCATCGCGCGCGAGATTGCCGCGCTGGCGCGGCAATACCAGCGCGACGCGTTGCGGATCGACACCGTCGCGCGCA ACCAGCCGCACGCCGATATCGAATATCGGGCGATCCGGATCGCCGCCCACGAGGTCGAGCACGGGCTGGTGAACCTGCTG CGGTTTCATGAGGGCGCCGGTTGCCTGGTGTTCTGCTCGACCCGCGAGTCCGTGCGGCAGCTTTACGGGCGGCTTCAGGA ACGCGGCTTCGCCGCCGTCGCCCTGTCCGGCGAGCTCAGCCAGTCGGAACGCAATGCCGCGCTGCAATCCCTGCGCGACG GGCGCGCCCGCGTCTGCATCGCCACCGACGTCGCCGCGCGGGGACTCGACCTGCCCAATCTCGACCTTGTCATCCACGCC GACCTGCCGGCCAACAAGGCGACCCTGCTCCATCGCAGCGGCCGGACCGGACGCGCCGGACGCAAGGGCCTCTGCCTGCT GATGGTGCCCGACAGAAGCCGGCGCCGGGCGGAGGTTCTGCTTGCGTCGGCGAATATCAGGGCGATCTGGGAGGCCCCTC CGACGGCCGAGGCCATCCGCGCCCGCGACCATGCGCGGCTGCTGACCGATCCGGTGCTGACCGAGGCGCCGCTCGATGAG GAGATCGCCCTGGCGCGTGAACTGCTTGCGAACCGGTCGGCCGATGTTGTCGCAACGGCGCTGATCCGCCTGTATCGCGC CCGCCTGCCGGCGCCGGAGGAGATCGCGCCGCAGCCTGAAGTCCTCCCCCGTCCGGCGGCCCGTCGCGCCGCGGGCGCAG AGGACGGGCGGGCCATGGTATGGTTCCGGTGCGATGTCGGCCGCCGCAAGAAGGCCGATCCGAAATGGCTGCTGCCGGCG ATCTGCCGGGTCGGCGGCGTCACCAAGCGCGATATCGGGGCGATCCGCATCTTCGATCACGAGACGCGGTTTGAAATCGG CGCCGATGTGGCCGACGCCTTTGCCGCCGCCATCGGTGCCGGCACCAATTCCGAGATGCGGATCGAACCGGCGGGCCACC AACCCGGCACGGCAGCGGAGGATTTCGGTCGCGGCAGGAAGGAAGGCCGGTTCGGGAAATCCCCGTCCCGGATCAAAGCT CACGCGCCGCCCCGCCGCGGCGGCAAGGCACGGAAAGCGGGATAG
Upstream 100 bases:
>100_bases GGTCATCCGCCGGCGGGCGAGGGGCGTTCCGGCCCAGCCTCGGTGGGGGGACGGCGCCGGTATGCGCCAGCCATGTTGGT CGTTTCCGCCGGGTGCGGTA
Downstream 100 bases:
>100_bases ATCGGCGCGCGGACGATCCTTGCCGAGGCCGGCCGGTTCCTGATCATCGTGGGCGTGCGCCATGAGCGTGGCGGGGCCTC CGGAACGGCGACAATGCTCG
Product: DEAD/DEAH box helicase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 574; Mature: 573
Protein sequence:
>574_residues MSPMPFYVETPALQHALAARGYADPTAVQSAVLEPEAEGRDLLVSAQTGSGKTVAYGLAFAATILDEDVLPPAGAPLALI IAPTRELAIQVHAELAWLYEHTGASVVSCVGGMDPRREQRALASGCHIVVGTPGRLQDHIERRHLDLGRLRVVVLDEADE MLDLGFRDELEFILGASPADRRTLLFSATIAREIAALARQYQRDALRIDTVARNQPHADIEYRAIRIAAHEVEHGLVNLL RFHEGAGCLVFCSTRESVRQLYGRLQERGFAAVALSGELSQSERNAALQSLRDGRARVCIATDVAARGLDLPNLDLVIHA DLPANKATLLHRSGRTGRAGRKGLCLLMVPDRSRRRAEVLLASANIRAIWEAPPTAEAIRARDHARLLTDPVLTEAPLDE EIALARELLANRSADVVATALIRLYRARLPAPEEIAPQPEVLPRPAARRAAGAEDGRAMVWFRCDVGRRKKADPKWLLPA ICRVGGVTKRDIGAIRIFDHETRFEIGADVADAFAAAIGAGTNSEMRIEPAGHQPGTAAEDFGRGRKEGRFGKSPSRIKA HAPPRRGGKARKAG
Sequences:
>Translated_574_residues MSPMPFYVETPALQHALAARGYADPTAVQSAVLEPEAEGRDLLVSAQTGSGKTVAYGLAFAATILDEDVLPPAGAPLALI IAPTRELAIQVHAELAWLYEHTGASVVSCVGGMDPRREQRALASGCHIVVGTPGRLQDHIERRHLDLGRLRVVVLDEADE MLDLGFRDELEFILGASPADRRTLLFSATIAREIAALARQYQRDALRIDTVARNQPHADIEYRAIRIAAHEVEHGLVNLL RFHEGAGCLVFCSTRESVRQLYGRLQERGFAAVALSGELSQSERNAALQSLRDGRARVCIATDVAARGLDLPNLDLVIHA DLPANKATLLHRSGRTGRAGRKGLCLLMVPDRSRRRAEVLLASANIRAIWEAPPTAEAIRARDHARLLTDPVLTEAPLDE EIALARELLANRSADVVATALIRLYRARLPAPEEIAPQPEVLPRPAARRAAGAEDGRAMVWFRCDVGRRKKADPKWLLPA ICRVGGVTKRDIGAIRIFDHETRFEIGADVADAFAAAIGAGTNSEMRIEPAGHQPGTAAEDFGRGRKEGRFGKSPSRIKA HAPPRRGGKARKAG >Mature_573_residues SPMPFYVETPALQHALAARGYADPTAVQSAVLEPEAEGRDLLVSAQTGSGKTVAYGLAFAATILDEDVLPPAGAPLALII APTRELAIQVHAELAWLYEHTGASVVSCVGGMDPRREQRALASGCHIVVGTPGRLQDHIERRHLDLGRLRVVVLDEADEM LDLGFRDELEFILGASPADRRTLLFSATIAREIAALARQYQRDALRIDTVARNQPHADIEYRAIRIAAHEVEHGLVNLLR FHEGAGCLVFCSTRESVRQLYGRLQERGFAAVALSGELSQSERNAALQSLRDGRARVCIATDVAARGLDLPNLDLVIHAD LPANKATLLHRSGRTGRAGRKGLCLLMVPDRSRRRAEVLLASANIRAIWEAPPTAEAIRARDHARLLTDPVLTEAPLDEE IALARELLANRSADVVATALIRLYRARLPAPEEIAPQPEVLPRPAARRAAGAEDGRAMVWFRCDVGRRKKADPKWLLPAI CRVGGVTKRDIGAIRIFDHETRFEIGADVADAFAAAIGAGTNSEMRIEPAGHQPGTAAEDFGRGRKEGRFGKSPSRIKAH APPRRGGKARKAG
Specific function: Has a helix-destabilizing activity. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. May function in rRNA maturation and ribosome biogenesis [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI20149629, Length=341, Percent_Identity=34.6041055718475, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI7661920, Length=342, Percent_Identity=33.9181286549708, Blast_Score=208, Evalue=1e-53, Organism=Homo sapiens, GI13129006, Length=365, Percent_Identity=34.5205479452055, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI45446747, Length=345, Percent_Identity=35.0724637681159, Blast_Score=206, Evalue=5e-53, Organism=Homo sapiens, GI45446743, Length=345, Percent_Identity=35.0724637681159, Blast_Score=206, Evalue=5e-53, Organism=Homo sapiens, GI50659095, Length=403, Percent_Identity=33.9950372208437, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI41327773, Length=353, Percent_Identity=33.7110481586402, Blast_Score=195, Evalue=8e-50, Organism=Homo sapiens, GI4503529, Length=350, Percent_Identity=35.1428571428571, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI301171467, Length=383, Percent_Identity=32.8981723237598, Blast_Score=189, Evalue=8e-48, Organism=Homo sapiens, GI83700235, Length=346, Percent_Identity=34.971098265896, Blast_Score=189, Evalue=9e-48, Organism=Homo sapiens, GI87196351, Length=381, Percent_Identity=33.0708661417323, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI301171475, Length=381, Percent_Identity=33.0708661417323, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI148613856, Length=351, Percent_Identity=33.9031339031339, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI38201710, Length=351, Percent_Identity=33.9031339031339, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI41327771, Length=369, Percent_Identity=31.1653116531165, Blast_Score=185, Evalue=9e-47, Organism=Homo sapiens, GI21071032, Length=387, Percent_Identity=30.2325581395349, Blast_Score=185, Evalue=1e-46, Organism=Homo sapiens, GI4758138, Length=352, Percent_Identity=32.9545454545455, Blast_Score=183, Evalue=4e-46, Organism=Homo sapiens, GI169881239, Length=387, Percent_Identity=32.2997416020672, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI13514809, Length=387, Percent_Identity=32.2997416020672, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI31542656, Length=349, Percent_Identity=36.676217765043, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI262118318, Length=341, Percent_Identity=33.7243401759531, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI216548263, Length=341, Percent_Identity=33.7243401759531, Blast_Score=180, Evalue=3e-45, Organism=Homo sapiens, GI262231852, Length=341, Percent_Identity=33.7243401759531, Blast_Score=180, Evalue=4e-45, Organism=Homo sapiens, GI13518015, Length=341, Percent_Identity=33.7243401759531, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI188035877, Length=348, Percent_Identity=33.6206896551724, Blast_Score=177, Evalue=3e-44, Organism=Homo sapiens, GI224593278, Length=359, Percent_Identity=32.5905292479109, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI222352149, Length=385, Percent_Identity=31.4285714285714, Blast_Score=175, Evalue=9e-44, Organism=Homo sapiens, GI21040371, Length=352, Percent_Identity=29.5454545454545, Blast_Score=175, Evalue=1e-43, Organism=Homo sapiens, GI41327779, Length=405, Percent_Identity=33.0864197530864, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI38327634, Length=342, Percent_Identity=33.0409356725146, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI4758112, Length=352, Percent_Identity=29.2613636363636, Blast_Score=172, Evalue=1e-42, Organism=Homo sapiens, GI18375623, Length=352, Percent_Identity=29.2613636363636, Blast_Score=172, Evalue=1e-42, Organism=Homo sapiens, GI41327776, Length=341, Percent_Identity=30.4985337243402, Blast_Score=165, Evalue=1e-40, Organism=Homo sapiens, GI256223453, Length=349, Percent_Identity=31.2320916905444, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI55749865, Length=363, Percent_Identity=28.6501377410468, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI164664518, Length=331, Percent_Identity=29.0030211480363, Blast_Score=160, Evalue=3e-39, Organism=Homo sapiens, GI13514831, Length=415, Percent_Identity=30.1204819277108, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI17505907, Length=378, Percent_Identity=30.1587301587302, Blast_Score=154, Evalue=3e-37, Organism=Homo sapiens, GI38569503, Length=354, Percent_Identity=31.9209039548023, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI38569505, Length=354, Percent_Identity=31.9209039548023, Blast_Score=150, Evalue=4e-36, Organism=Homo sapiens, GI6005743, Length=360, Percent_Identity=31.1111111111111, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI8922886, Length=360, Percent_Identity=31.1111111111111, Blast_Score=146, Evalue=5e-35, Organism=Homo sapiens, GI164419732, Length=353, Percent_Identity=31.728045325779, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI164419743, Length=341, Percent_Identity=31.0850439882698, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI51094101, Length=341, Percent_Identity=31.0850439882698, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI62241022, Length=350, Percent_Identity=31.1428571428571, Blast_Score=143, Evalue=4e-34, Organism=Homo sapiens, GI62241024, Length=326, Percent_Identity=31.5950920245399, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI9966805, Length=304, Percent_Identity=32.8947368421053, Blast_Score=133, Evalue=4e-31, Organism=Homo sapiens, GI256773275, Length=360, Percent_Identity=30.8333333333333, Blast_Score=129, Evalue=6e-30, Organism=Homo sapiens, GI9506931, Length=515, Percent_Identity=27.5728155339806, Blast_Score=123, Evalue=5e-28, Organism=Homo sapiens, GI20336298, Length=207, Percent_Identity=34.7826086956522, Blast_Score=112, Evalue=8e-25, Organism=Homo sapiens, GI154759257, Length=422, Percent_Identity=28.9099526066351, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI4826686, Length=352, Percent_Identity=27.8409090909091, Blast_Score=109, Evalue=7e-24, Organism=Escherichia coli, GI87082221, Length=529, Percent_Identity=31.9470699432892, Blast_Score=236, Evalue=4e-63, Organism=Escherichia coli, GI1787605, Length=372, Percent_Identity=38.1720430107527, Blast_Score=224, Evalue=1e-59, Organism=Escherichia coli, GI1788930, Length=340, Percent_Identity=38.8235294117647, Blast_Score=202, Evalue=5e-53, Organism=Escherichia coli, GI1787016, Length=341, Percent_Identity=34.0175953079179, Blast_Score=187, Evalue=1e-48, Organism=Escherichia coli, GI1790214, Length=337, Percent_Identity=34.4213649851632, Blast_Score=182, Evalue=5e-47, Organism=Escherichia coli, GI48994977, Length=349, Percent_Identity=24.6418338108883, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71987143, Length=337, Percent_Identity=35.9050445103858, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI17555296, Length=330, Percent_Identity=36.969696969697, Blast_Score=220, Evalue=2e-57, Organism=Caenorhabditis elegans, GI71995724, Length=340, Percent_Identity=34.4117647058824, Blast_Score=207, Evalue=2e-53, Organism=Caenorhabditis elegans, GI71995514, Length=360, Percent_Identity=36.9444444444444, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI17510309, Length=360, Percent_Identity=36.9444444444444, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI17510307, Length=360, Percent_Identity=36.9444444444444, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI17507121, Length=340, Percent_Identity=34.4117647058824, Blast_Score=206, Evalue=3e-53, Organism=Caenorhabditis elegans, GI86570094, Length=351, Percent_Identity=35.3276353276353, Blast_Score=200, Evalue=2e-51, Organism=Caenorhabditis elegans, GI115533224, Length=357, Percent_Identity=33.6134453781513, Blast_Score=193, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17552642, Length=343, Percent_Identity=34.6938775510204, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI17507945, Length=354, Percent_Identity=32.7683615819209, Blast_Score=190, Evalue=2e-48, Organism=Caenorhabditis elegans, GI71995718, Length=367, Percent_Identity=34.0599455040872, Blast_Score=186, Evalue=3e-47, Organism=Caenorhabditis elegans, GI17509811, Length=341, Percent_Identity=36.3636363636364, Blast_Score=181, Evalue=7e-46, Organism=Caenorhabditis elegans, GI32565321, Length=370, Percent_Identity=31.6216216216216, Blast_Score=180, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17510559, Length=401, Percent_Identity=30.6733167082294, Blast_Score=175, Evalue=6e-44, Organism=Caenorhabditis elegans, GI17552114, Length=342, Percent_Identity=29.2397660818713, Blast_Score=174, Evalue=9e-44, Organism=Caenorhabditis elegans, GI71982858, Length=353, Percent_Identity=28.8951841359773, Blast_Score=171, Evalue=1e-42, Organism=Caenorhabditis elegans, GI17507877, Length=417, Percent_Identity=30.6954436450839, Blast_Score=165, Evalue=8e-41, Organism=Caenorhabditis elegans, GI17537549, Length=358, Percent_Identity=32.4022346368715, Blast_Score=163, Evalue=2e-40, Organism=Caenorhabditis elegans, GI115532546, Length=334, Percent_Identity=34.1317365269461, Blast_Score=161, Evalue=1e-39, Organism=Caenorhabditis elegans, GI115532548, Length=334, Percent_Identity=34.1317365269461, Blast_Score=160, Evalue=2e-39, Organism=Caenorhabditis elegans, GI71999646, Length=344, Percent_Identity=29.9418604651163, Blast_Score=159, Evalue=3e-39, Organism=Caenorhabditis elegans, GI71999644, Length=344, Percent_Identity=29.9418604651163, Blast_Score=158, Evalue=8e-39, Organism=Caenorhabditis elegans, GI17507641, Length=398, Percent_Identity=30.6532663316583, Blast_Score=158, Evalue=9e-39, Organism=Caenorhabditis elegans, GI17507879, Length=376, Percent_Identity=30.3191489361702, Blast_Score=155, Evalue=7e-38, Organism=Caenorhabditis elegans, GI17507881, Length=350, Percent_Identity=32, Blast_Score=153, Evalue=3e-37, Organism=Caenorhabditis elegans, GI193208216, Length=383, Percent_Identity=32.1148825065274, Blast_Score=151, Evalue=8e-37, Organism=Caenorhabditis elegans, GI32564046, Length=382, Percent_Identity=30.8900523560209, Blast_Score=151, Evalue=9e-37, Organism=Caenorhabditis elegans, GI17505370, Length=348, Percent_Identity=28.735632183908, Blast_Score=147, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17553716, Length=326, Percent_Identity=30.0613496932515, Blast_Score=146, Evalue=2e-35, Organism=Caenorhabditis elegans, GI193206561, Length=336, Percent_Identity=29.4642857142857, Blast_Score=145, Evalue=4e-35, Organism=Caenorhabditis elegans, GI17556951, Length=319, Percent_Identity=31.3479623824451, Blast_Score=139, Evalue=4e-33, Organism=Caenorhabditis elegans, GI71990816, Length=351, Percent_Identity=28.7749287749288, Blast_Score=136, Evalue=3e-32, Organism=Caenorhabditis elegans, GI17508543, Length=357, Percent_Identity=28.0112044817927, Blast_Score=133, Evalue=2e-31, Organism=Caenorhabditis elegans, GI17536099, Length=373, Percent_Identity=27.8820375335121, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17536101, Length=373, Percent_Identity=27.8820375335121, Blast_Score=129, Evalue=3e-30, Organism=Caenorhabditis elegans, GI17536103, Length=373, Percent_Identity=28.1501340482574, Blast_Score=129, Evalue=5e-30, Organism=Caenorhabditis elegans, GI71997889, Length=370, Percent_Identity=30.2702702702703, Blast_Score=124, Evalue=2e-28, Organism=Caenorhabditis elegans, GI25148291, Length=343, Percent_Identity=26.8221574344023, Blast_Score=109, Evalue=5e-24, Organism=Caenorhabditis elegans, GI25148203, Length=371, Percent_Identity=23.1805929919137, Blast_Score=99, Evalue=8e-21, Organism=Caenorhabditis elegans, GI71982862, Length=213, Percent_Identity=29.1079812206573, Blast_Score=99, Evalue=8e-21, Organism=Caenorhabditis elegans, GI71987152, Length=92, Percent_Identity=40.2173913043478, Blast_Score=84, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6324217, Length=347, Percent_Identity=34.5821325648415, Blast_Score=207, Evalue=5e-54, Organism=Saccharomyces cerevisiae, GI6321856, Length=345, Percent_Identity=36.231884057971, Blast_Score=196, Evalue=8e-51, Organism=Saccharomyces cerevisiae, GI6324778, Length=337, Percent_Identity=35.6083086053413, Blast_Score=195, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6320224, Length=345, Percent_Identity=31.5942028985507, Blast_Score=190, Evalue=5e-49, Organism=Saccharomyces cerevisiae, GI6322912, Length=312, Percent_Identity=33.974358974359, Blast_Score=190, Evalue=5e-49, Organism=Saccharomyces cerevisiae, GI6322323, Length=312, Percent_Identity=33.974358974359, Blast_Score=190, Evalue=5e-49, Organism=Saccharomyces cerevisiae, GI6325138, Length=367, Percent_Identity=32.425068119891, Blast_Score=188, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6321360, Length=352, Percent_Identity=32.1022727272727, Blast_Score=187, Evalue=5e-48, Organism=Saccharomyces cerevisiae, GI6323021, Length=372, Percent_Identity=34.1397849462366, Blast_Score=186, Evalue=8e-48, Organism=Saccharomyces cerevisiae, GI6320041, Length=344, Percent_Identity=30.2325581395349, Blast_Score=174, Evalue=4e-44, Organism=Saccharomyces cerevisiae, GI6321963, Length=367, Percent_Identity=34.0599455040872, Blast_Score=170, Evalue=5e-43, Organism=Saccharomyces cerevisiae, GI6324620, Length=364, Percent_Identity=29.6703296703297, Blast_Score=169, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6322427, Length=373, Percent_Identity=31.6353887399464, Blast_Score=166, Evalue=9e-42, Organism=Saccharomyces cerevisiae, GI6320119, Length=361, Percent_Identity=30.4709141274238, Blast_Score=166, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6321111, Length=353, Percent_Identity=31.728045325779, Blast_Score=164, Evalue=3e-41, Organism=Saccharomyces cerevisiae, GI6320449, Length=355, Percent_Identity=32.3943661971831, Blast_Score=164, Evalue=4e-41, Organism=Saccharomyces cerevisiae, GI6323947, Length=345, Percent_Identity=32.1739130434783, Blast_Score=162, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6320400, Length=353, Percent_Identity=30.3116147308782, Blast_Score=153, Evalue=9e-38, Organism=Saccharomyces cerevisiae, GI6319618, Length=401, Percent_Identity=28.428927680798, Blast_Score=146, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6319714, Length=355, Percent_Identity=28.4507042253521, Blast_Score=141, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6322876, Length=416, Percent_Identity=30.0480769230769, Blast_Score=133, Evalue=6e-32, Organism=Saccharomyces cerevisiae, GI6321267, Length=331, Percent_Identity=26.5861027190332, Blast_Score=118, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6323306, Length=410, Percent_Identity=25.1219512195122, Blast_Score=113, Evalue=7e-26, Organism=Saccharomyces cerevisiae, GI6324366, Length=363, Percent_Identity=25.6198347107438, Blast_Score=97, Evalue=7e-21, Organism=Saccharomyces cerevisiae, GI6320173, Length=187, Percent_Identity=29.4117647058824, Blast_Score=90, Evalue=8e-19, Organism=Drosophila melanogaster, GI24662330, Length=343, Percent_Identity=32.9446064139942, Blast_Score=206, Evalue=3e-53, Organism=Drosophila melanogaster, GI24585582, Length=339, Percent_Identity=34.2182890855457, Blast_Score=203, Evalue=3e-52, Organism=Drosophila melanogaster, GI28574962, Length=355, Percent_Identity=34.0845070422535, Blast_Score=202, Evalue=7e-52, Organism=Drosophila melanogaster, GI24582080, Length=344, Percent_Identity=35.1744186046512, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI24582078, Length=344, Percent_Identity=35.1744186046512, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI17136248, Length=344, Percent_Identity=35.1744186046512, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI24582075, Length=344, Percent_Identity=35.1744186046512, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI18857967, Length=355, Percent_Identity=34.9295774647887, Blast_Score=200, Evalue=3e-51, Organism=Drosophila melanogaster, GI24645031, Length=340, Percent_Identity=33.2352941176471, Blast_Score=200, Evalue=3e-51, Organism=Drosophila melanogaster, GI24584399, Length=325, Percent_Identity=34.1538461538462, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI24642151, Length=363, Percent_Identity=33.0578512396694, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI24644479, Length=350, Percent_Identity=34.8571428571429, Blast_Score=189, Evalue=4e-48, Organism=Drosophila melanogaster, GI24644483, Length=350, Percent_Identity=34.8571428571429, Blast_Score=189, Evalue=5e-48, Organism=Drosophila melanogaster, GI281361218, Length=350, Percent_Identity=34.8571428571429, Blast_Score=189, Evalue=6e-48, Organism=Drosophila melanogaster, GI24644481, Length=350, Percent_Identity=34.8571428571429, Blast_Score=189, Evalue=6e-48, Organism=Drosophila melanogaster, GI24644487, Length=350, Percent_Identity=34.8571428571429, Blast_Score=189, Evalue=6e-48, Organism=Drosophila melanogaster, GI45551833, Length=350, Percent_Identity=34.8571428571429, Blast_Score=189, Evalue=6e-48, Organism=Drosophila melanogaster, GI24644485, Length=350, Percent_Identity=34.8571428571429, Blast_Score=189, Evalue=6e-48, Organism=Drosophila melanogaster, GI17977678, Length=374, Percent_Identity=33.4224598930481, Blast_Score=186, Evalue=4e-47, Organism=Drosophila melanogaster, GI17985987, Length=373, Percent_Identity=32.171581769437, Blast_Score=185, Evalue=7e-47, Organism=Drosophila melanogaster, GI24584994, Length=361, Percent_Identity=31.3019390581717, Blast_Score=175, Evalue=8e-44, Organism=Drosophila melanogaster, GI21356161, Length=360, Percent_Identity=32.7777777777778, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI21355075, Length=344, Percent_Identity=29.9418604651163, Blast_Score=170, Evalue=3e-42, Organism=Drosophila melanogaster, GI28571808, Length=339, Percent_Identity=31.858407079646, Blast_Score=168, Evalue=1e-41, Organism=Drosophila melanogaster, GI28571809, Length=339, Percent_Identity=31.858407079646, Blast_Score=168, Evalue=1e-41, Organism=Drosophila melanogaster, GI281365720, Length=303, Percent_Identity=34.6534653465347, Blast_Score=167, Evalue=2e-41, Organism=Drosophila melanogaster, GI17136814, Length=349, Percent_Identity=33.2378223495702, Blast_Score=165, Evalue=9e-41, Organism=Drosophila melanogaster, GI24583281, Length=342, Percent_Identity=27.4853801169591, Blast_Score=165, Evalue=1e-40, Organism=Drosophila melanogaster, GI24583279, Length=342, Percent_Identity=27.4853801169591, Blast_Score=164, Evalue=2e-40, Organism=Drosophila melanogaster, GI24642822, Length=358, Percent_Identity=31.0055865921788, Blast_Score=159, Evalue=6e-39, Organism=Drosophila melanogaster, GI24581954, Length=352, Percent_Identity=29.2613636363636, Blast_Score=158, Evalue=1e-38, Organism=Drosophila melanogaster, GI24581952, Length=352, Percent_Identity=29.2613636363636, Blast_Score=158, Evalue=1e-38, Organism=Drosophila melanogaster, GI24581956, Length=352, Percent_Identity=29.2613636363636, Blast_Score=158, Evalue=1e-38, Organism=Drosophila melanogaster, GI28575014, Length=341, Percent_Identity=30.2052785923754, Blast_Score=149, Evalue=5e-36, Organism=Drosophila melanogaster, GI17647335, Length=431, Percent_Identity=27.1461716937355, Blast_Score=145, Evalue=8e-35, Organism=Drosophila melanogaster, GI24666101, Length=364, Percent_Identity=30.2197802197802, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI20130173, Length=423, Percent_Identity=28.3687943262411, Blast_Score=139, Evalue=6e-33, Organism=Drosophila melanogaster, GI18859659, Length=407, Percent_Identity=28.5012285012285, Blast_Score=138, Evalue=8e-33, Organism=Drosophila melanogaster, GI21355559, Length=368, Percent_Identity=32.3369565217391, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI24668515, Length=331, Percent_Identity=29.3051359516616, Blast_Score=121, Evalue=1e-27, Organism=Drosophila melanogaster, GI24643725, Length=376, Percent_Identity=25.531914893617, Blast_Score=107, Evalue=3e-23, Organism=Drosophila melanogaster, GI19920478, Length=374, Percent_Identity=27.0053475935829, Blast_Score=106, Evalue=5e-23, Organism=Drosophila melanogaster, GI17136666, Length=395, Percent_Identity=28.1012658227848, Blast_Score=103, Evalue=4e-22, Organism=Drosophila melanogaster, GI28571338, Length=199, Percent_Identity=32.6633165829146, Blast_Score=100, Evalue=5e-21, Organism=Drosophila melanogaster, GI24640164, Length=336, Percent_Identity=22.9166666666667, Blast_Score=79, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 62258; Mature: 62127
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPMPFYVETPALQHALAARGYADPTAVQSAVLEPEAEGRDLLVSAQTGSGKTVAYGLAF CCCCCEEEECHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEHHHHH AATILDEDVLPPAGAPLALIIAPTRELAIQVHAELAWLYEHTGASVVSCVGGMDPRREQR HHHHHHCCCCCCCCCCEEEEEECCHHHEEEEHHHEEEEHHHCCCHHHHHHCCCCCHHHHH ALASGCHIVVGTPGRLQDHIERRHLDLGRLRVVVLDEADEMLDLGFRDELEFILGASPAD HHHCCCEEEEECCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHCCCHHHHHHEECCCCCC RRTLLFSATIAREIAALARQYQRDALRIDTVARNQPHADIEYRAIRIAAHEVEHGLVNLL CEEEEEHHHHHHHHHHHHHHHHHHHEEEEHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHH RFHEGAGCLVFCSTRESVRQLYGRLQERGFAAVALSGELSQSERNAALQSLRDGRARVCI HHCCCCCEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEE ATDVAARGLDLPNLDLVIHADLPANKATLLHRSGRTGRAGRKGLCLLMVPDRSRRRAEVL EECHHHCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEE LASANIRAIWEAPPTAEAIRARDHARLLTDPVLTEAPLDEEIALARELLANRSADVVATA EEECCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHH LIRLYRARLPAPEEIAPQPEVLPRPAARRAAGAEDGRAMVWFRCDVGRRKKADPKWLLPA HHHHHHHHCCCCHHCCCCCCCCCCCHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHH ICRVGGVTKRDIGAIRIFDHETRFEIGADVADAFAAAIGAGTNSEMRIEPAGHQPGTAAE HHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHH DFGRGRKEGRFGKSPSRIKAHAPPRRGGKARKAG HHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC >Mature Secondary Structure SPMPFYVETPALQHALAARGYADPTAVQSAVLEPEAEGRDLLVSAQTGSGKTVAYGLAF CCCCEEEECHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEHHHHH AATILDEDVLPPAGAPLALIIAPTRELAIQVHAELAWLYEHTGASVVSCVGGMDPRREQR HHHHHHCCCCCCCCCCEEEEEECCHHHEEEEHHHEEEEHHHCCCHHHHHHCCCCCHHHHH ALASGCHIVVGTPGRLQDHIERRHLDLGRLRVVVLDEADEMLDLGFRDELEFILGASPAD HHHCCCEEEEECCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHCCCHHHHHHEECCCCCC RRTLLFSATIAREIAALARQYQRDALRIDTVARNQPHADIEYRAIRIAAHEVEHGLVNLL CEEEEEHHHHHHHHHHHHHHHHHHHEEEEHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHH RFHEGAGCLVFCSTRESVRQLYGRLQERGFAAVALSGELSQSERNAALQSLRDGRARVCI HHCCCCCEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEE ATDVAARGLDLPNLDLVIHADLPANKATLLHRSGRTGRAGRKGLCLLMVPDRSRRRAEVL EECHHHCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEE LASANIRAIWEAPPTAEAIRARDHARLLTDPVLTEAPLDEEIALARELLANRSADVVATA EEECCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHH LIRLYRARLPAPEEIAPQPEVLPRPAARRAAGAEDGRAMVWFRCDVGRRKKADPKWLLPA HHHHHHHHCCCCHHCCCCCCCCCCCHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHH ICRVGGVTKRDIGAIRIFDHETRFEIGADVADAFAAAIGAGTNSEMRIEPAGHQPGTAAE HHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHH DFGRGRKEGRFGKSPSRIKAHAPPRRGGKARKAG HHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377; 10481020 [H]