| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148260836
Identifier: 148260836
GI number: 148260836
Start: 2032873
End: 2033292
Strand: Reverse
Name: 148260836
Synonym: Acry_1842
Alternate gene names: NA
Gene position: 2033292-2032873 (Counterclockwise)
Preceding gene: 148260838
Following gene: 148260835
Centisome position: 59.99
GC content: 65.0
Gene sequence:
>420_bases ATGCAGGACAACGGAATCGATGAAGCGATGATCGAACGGCAGGTGCATGCCTTCTATGGAGCGGCGAGGCGCGACCCGCT CATCGGCCCCGTCTTCGAGGCGAAGGTGCATGACTGGGATCGTCATCTCGGCCGCATGTGCGCGTTCTGGTCCTCTGTCG CGCTGATGAGCGGCCGCTACAGCGGCACGCCGATGCAGGCGCACGCGCCGCTGCCCATCGAGGCCGCGCATTTCGGAAGA TGGATGGAACTGTGGGCGGAAACCGCGCGGGAACACTGCCCGCCGGACGCGGCCGATCGTTTCGTCCTGCTCGCGGGGCG GATTGCCCGCAGCCTTGAACACGGCATTGCCGTGCATCGCGGCGAACTGCCGCTCTTCCCTCATGCCAATCAGGAGACAA CCCATGTCCGGGCAGATTGA
Upstream 100 bases:
>100_bases CAAACATATATTAGTCCGCTTATCAGGTATTGACAATGCGTATTTGGGCGGAGCATTTTACGTATATGAAATGCGTATAT AGCCGGCTGACGGAGTAGCC
Downstream 100 bases:
>100_bases AACGCCGGCCGATGCCGGTCTGTTGAACGCGCCTGTCGGCCAGATCGCCGCCAGCCGAGCGGGTGCCGCTTCGGTGTTTC AGACCTTCGGCATCGATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Globin-Like Protein; Sec-Independent Protein Translocase Protein TatC; Globin Family Protein; SEC-Independent Protein Translocase Protein TatC; Truncated Hemoglobin-Like Protein; Protozoan/Cyanobacterial Globin Family Protein; Sec-Independent Protein Translocase Protein Tatc; Sec-Independent Protein Translocase; Globin Family; SEC-Independent Protein Translocase Protein TATC; Truncated Hemoglobin Protein; Truncated Hemoglobins; Hemoglobin; Sec-Independent Protein Translocase Protein
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MQDNGIDEAMIERQVHAFYGAARRDPLIGPVFEAKVHDWDRHLGRMCAFWSSVALMSGRYSGTPMQAHAPLPIEAAHFGR WMELWAETAREHCPPDAADRFVLLAGRIARSLEHGIAVHRGELPLFPHANQETTHVRAD
Sequences:
>Translated_139_residues MQDNGIDEAMIERQVHAFYGAARRDPLIGPVFEAKVHDWDRHLGRMCAFWSSVALMSGRYSGTPMQAHAPLPIEAAHFGR WMELWAETAREHCPPDAADRFVLLAGRIARSLEHGIAVHRGELPLFPHANQETTHVRAD >Mature_139_residues MQDNGIDEAMIERQVHAFYGAARRDPLIGPVFEAKVHDWDRHLGRMCAFWSSVALMSGRYSGTPMQAHAPLPIEAAHFGR WMELWAETAREHCPPDAADRFVLLAGRIARSLEHGIAVHRGELPLFPHANQETTHVRAD
Specific function: Unknown
COG id: COG2346
COG function: function code R; Truncated hemoglobins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15659; Mature: 15659
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDNGIDEAMIERQVHAFYGAARRDPLIGPVFEAKVHDWDRHLGRMCAFWSSVALMSGRY CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SGTPMQAHAPLPIEAAHFGRWMELWAETAREHCPPDAADRFVLLAGRIARSLEHGIAVHR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEEC GELPLFPHANQETTHVRAD CCCCCCCCCCCCCCEEECC >Mature Secondary Structure MQDNGIDEAMIERQVHAFYGAARRDPLIGPVFEAKVHDWDRHLGRMCAFWSSVALMSGRY CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SGTPMQAHAPLPIEAAHFGRWMELWAETAREHCPPDAADRFVLLAGRIARSLEHGIAVHR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEEC GELPLFPHANQETTHVRAD CCCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA