| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is gluQ [H]
Identifier: 148260328
GI number: 148260328
Start: 1482178
End: 1483023
Strand: Reverse
Name: gluQ [H]
Synonym: Acry_1325
Alternate gene names: 148260328
Gene position: 1483023-1482178 (Counterclockwise)
Preceding gene: 148260333
Following gene: 148260327
Centisome position: 43.76
GC content: 73.88
Gene sequence:
>846_bases ATGTCCATCGTCACCCGTTTCGCGCCGAGCCCGACCGGCTACCTGCATCTCGGCCACGCGGCCTCGGCCATGGCCGGGCA CGACCTGGCGCGCGGGGCGGGCGGGCGGTTCCTGCTGCGGCTCGAGGATATCGATGCCGGGCGCTGCCGGCCCGGATTCG CCGAGGCGATCCTGGAGGACCTGGCCTGGCTCGGCCTGGCCTGGGATGGCGCGGTGCGGGTGCAGTCGGCGCATTTCGAC GAGTACCGGGCGGCGCTGGCGCGGCTGGAGGCGATGGGATTGCTCTACCGGTGCTTCTGCACGCGGGCGGCGATTGCCGC GGCCCTCGGCGCGCCGCACGGGGCCGAGGCGGCCTATCCCGGCACCTGCCGCGGGCTCGATCCGGCGCTGGCGGACGCGC GGGCGGCGCAAGGCGAGCCCTATGCGCTGCGGCTGCGGATGGACCGGGCCGCGGCGATGGCCGGGCGGCTGCGCTATCAC GAGGCGGCGGAAGGCTGGGTGGAGGCCGATCCGCGGCCGCATGGCGATGTGGTGCTGGCGCGCAAGGACGTGCCGGCGAG CTATCATCTCTGCGTCTGCCATGACGATGCGGCGCAGGAGGTGACGCATGTGACGCGGGGCGAGGACCTGCGGGCGACGA CGGATGTTCACGTGCTGCTGCAGGCGCTGCTTGGCTGGCCGCATCCGGCCTATGCCCATCATCCGCTGATCCGCGACGCG GCGGGGCGGCGGCTGGCCAAGCGCGACCGGGCGGCGACGCTGCGCGATCTGCGGGACGCCGGGGCCACGCCCGCGCAAAT CCGCGAGATGGTCTCTTGCCGGATCGGCGATCTCGCCTCACTCTGA
Upstream 100 bases:
>100_bases CGCCTTGCCGCCGTTCGCCGGGCCCCAGCGCGGTCCGTCCAGTTCAGCCATGAAGTCCTGCTCCTTGCATTTGCGGGGGA GCGTATCATCGTGGAGGCCG
Downstream 100 bases:
>100_bases CAGGATGATGCGTTTCGCGATTTTGGTTCCGACCGCCGGCGCGGCCCTCGCGCTCGGCCTGCTGCTGTCCTCGTCCCCGG CCCATGCCGTGCCGGCGCCG
Product: glutamyl-tRNA synthetase, class Ic
Products: AMP; L-Glutamyl-tRNA(Glu); Diphosphate [C]
Alternate protein names: Glu-Q-RSs [H]
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MSIVTRFAPSPTGYLHLGHAASAMAGHDLARGAGGRFLLRLEDIDAGRCRPGFAEAILEDLAWLGLAWDGAVRVQSAHFD EYRAALARLEAMGLLYRCFCTRAAIAAALGAPHGAEAAYPGTCRGLDPALADARAAQGEPYALRLRMDRAAAMAGRLRYH EAAEGWVEADPRPHGDVVLARKDVPASYHLCVCHDDAAQEVTHVTRGEDLRATTDVHVLLQALLGWPHPAYAHHPLIRDA AGRRLAKRDRAATLRDLRDAGATPAQIREMVSCRIGDLASL
Sequences:
>Translated_281_residues MSIVTRFAPSPTGYLHLGHAASAMAGHDLARGAGGRFLLRLEDIDAGRCRPGFAEAILEDLAWLGLAWDGAVRVQSAHFD EYRAALARLEAMGLLYRCFCTRAAIAAALGAPHGAEAAYPGTCRGLDPALADARAAQGEPYALRLRMDRAAAMAGRLRYH EAAEGWVEADPRPHGDVVLARKDVPASYHLCVCHDDAAQEVTHVTRGEDLRATTDVHVLLQALLGWPHPAYAHHPLIRDA AGRRLAKRDRAATLRDLRDAGATPAQIREMVSCRIGDLASL >Mature_280_residues SIVTRFAPSPTGYLHLGHAASAMAGHDLARGAGGRFLLRLEDIDAGRCRPGFAEAILEDLAWLGLAWDGAVRVQSAHFDE YRAALARLEAMGLLYRCFCTRAAIAAALGAPHGAEAAYPGTCRGLDPALADARAAQGEPYALRLRMDRAAAMAGRLRYHE AAEGWVEADPRPHGDVVLARKDVPASYHLCVCHDDAAQEVTHVTRGEDLRATTDVHVLLQALLGWPHPAYAHHPLIRDAA GRRLAKRDRAATLRDLRDAGATPAQIREMVSCRIGDLASL
Specific function: Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble positi
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=286, Percent_Identity=31.4685314685315, Blast_Score=131, Evalue=7e-31, Organism=Escherichia coli, GI1788743, Length=266, Percent_Identity=34.9624060150376, Blast_Score=162, Evalue=2e-41, Organism=Escherichia coli, GI226510925, Length=252, Percent_Identity=38.0952380952381, Blast_Score=142, Evalue=3e-35, Organism=Escherichia coli, GI1786895, Length=95, Percent_Identity=37.8947368421053, Blast_Score=76, Evalue=3e-15, Organism=Caenorhabditis elegans, GI71993394, Length=266, Percent_Identity=31.203007518797, Blast_Score=129, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6324540, Length=269, Percent_Identity=32.3420074349442, Blast_Score=152, Evalue=4e-38, Organism=Saccharomyces cerevisiae, GI6321192, Length=80, Percent_Identity=37.5, Blast_Score=69, Evalue=8e-13, Organism=Drosophila melanogaster, GI24665321, Length=280, Percent_Identity=33.5714285714286, Blast_Score=150, Evalue=8e-37,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR022380 - InterPro: IPR000924 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: 6.1.1.17 [C]
Molecular weight: Translated: 30284; Mature: 30153
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: PS00334 MYB_2 ; PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIVTRFAPSPTGYLHLGHAASAMAGHDLARGAGGRFLLRLEDIDAGRCRPGFAEAILED CCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHH LAWLGLAWDGAVRVQSAHFDEYRAALARLEAMGLLYRCFCTRAAIAAALGAPHGAEAAYP HHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GTCRGLDPALADARAAQGEPYALRLRMDRAAAMAGRLRYHEAAEGWVEADPRPHGDVVLA CCCCCCCHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE RKDVPASYHLCVCHDDAAQEVTHVTRGEDLRATTDVHVLLQALLGWPHPAYAHHPLIRDA ECCCCCCEEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHCCCHHHHH AGRRLAKRDRAATLRDLRDAGATPAQIREMVSCRIGDLASL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHCCC >Mature Secondary Structure SIVTRFAPSPTGYLHLGHAASAMAGHDLARGAGGRFLLRLEDIDAGRCRPGFAEAILED CCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHH LAWLGLAWDGAVRVQSAHFDEYRAALARLEAMGLLYRCFCTRAAIAAALGAPHGAEAAYP HHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GTCRGLDPALADARAAQGEPYALRLRMDRAAAMAGRLRYHEAAEGWVEADPRPHGDVVLA CCCCCCCHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE RKDVPASYHLCVCHDDAAQEVTHVTRGEDLRATTDVHVLLQALLGWPHPAYAHHPLIRDA ECCCCCCEEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHCCCHHHHH AGRRLAKRDRAATLRDLRDAGATPAQIREMVSCRIGDLASL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-Glutamate; tRNA (Glu) [C]
Specific reaction: ATP + L-Glutamate + tRNA (Glu) --> AMP + L-Glutamyl-tRNA(Glu) + Diphosphate [C]
General reaction: Aminoacylation; Esterification [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA