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The map label for this gene is glxA [H]

Identifier: 148260013

GI number: 148260013

Start: 1113737

End: 1114792

Strand: Reverse

Name: glxA [H]

Synonym: Acry_1004

Alternate gene names: 148260013

Gene position: 1114792-1113737 (Counterclockwise)

Preceding gene: 148260014

Following gene: 148260012

Centisome position: 32.89

GC content: 71.88

Gene sequence:

>1056_bases
ATGAACGGAAGGGCAGCGAACGCACAAAGGGGCGAGGAGCGGCGACCGCTTTCGGTCGGCATCCTGCTCGCCCATGACTT
CACCCTCTCGGCGCTGTCGATGTTCGTCGACACGCTGCGGCTCGCCGCCGACGAATCGGATTTCTCGCGCCCGATCCATT
GCCGCTGGACGATCATGTCCGACAGCGCCGCGCCGATCCGCGCGAGCTGCGGGGTGCAGGTGCTGCCGGGCGCGACCTTC
CTCGACCCGGCCGGGTTCGACTACGTCGTCGTGATCGGCGGGCTGCTGGCCGGGCTGAACCAGAACGCGGCACCGCTCTG
CGCCTATCTCAAGCGCGCCGCCGCGGCGGGGGTGAAGCTGGTCGGCATCTGCAACGGCAGTTTCCTGCTCTGCCAGGCGG
GGCTGATGCAGGGGCGGCGGGTCTGCGTGAGCTGGCTGCACTACCAGGATTTCCGCGCGGCCTTCCCCGACCACGAGGTG
ACCGGCGACCGGCTGTTCGAGATCGACGGCGACCGGATCACCTGCGCCGGCGGGGCCGGGGCGGCGGATCTCGCGGCGCT
GCTGATCGAGCGGCATCTCGGCAGCCGGCTCGCGCAGAAGCCGCACCAGGTGCTGCAGCTGACGCGCACGCGCGGCGAGG
GGGCGGTGCAGCCGCACCCGCCGGTGGCGCACGAGGTGGCCGACGAGCAGGTGCGGCGCGCGCTGCTGATGATGGAGCAG
AACCTCTCCGACCCGGTGCCGATTGCGACCATCGCGCGGCGGCTCGACCTGTCGACGCGGCAGCTGGAGCGGCGCTTCGA
ATCGGCGCTCGGGCAACGGCCCTCGCTGCTCTACCGCACGCTGCGGCTGCGTTACGCGCGCTGGCTGCTGGAGACGACGG
GCCGCTCGGTCACGGATATCGCGCTGGAGGCCGGCTTCTCGGACTGCGCGCATTTCTCCCGCCAGTTCAAGGCGCTGCAC
GGGCTGTCGCCCTCGCAGATGCGGCCGGGCATGGCCGGGCGCGACGGCGGCGGCGCCGAGGCGGTCGCGATGCATGCGGG
GCCGCGTCCGTTCTGA

Upstream 100 bases:

>100_bases
CGATGCGGGATGCATGATTTCCGTATCGCGATCCGCGCGAGTGTGGTGATATGCGGTTCCGCCGCATGGCTCGTATGCGG
CGAGATCGTGGAGCAGGGCC

Downstream 100 bases:

>100_bases
TCCGCGCATGTGAGCAGCGCATGGCCGCCATGCGAGGGGGCTGCGAAATCGTTCTGGCGCGATGTCGCAAAAACGAAAGA
CGCTGATACACCGAACCGTC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MNGRAANAQRGEERRPLSVGILLAHDFTLSALSMFVDTLRLAADESDFSRPIHCRWTIMSDSAAPIRASCGVQVLPGATF
LDPAGFDYVVVIGGLLAGLNQNAAPLCAYLKRAAAAGVKLVGICNGSFLLCQAGLMQGRRVCVSWLHYQDFRAAFPDHEV
TGDRLFEIDGDRITCAGGAGAADLAALLIERHLGSRLAQKPHQVLQLTRTRGEGAVQPHPPVAHEVADEQVRRALLMMEQ
NLSDPVPIATIARRLDLSTRQLERRFESALGQRPSLLYRTLRLRYARWLLETTGRSVTDIALEAGFSDCAHFSRQFKALH
GLSPSQMRPGMAGRDGGGAEAVAMHAGPRPF

Sequences:

>Translated_351_residues
MNGRAANAQRGEERRPLSVGILLAHDFTLSALSMFVDTLRLAADESDFSRPIHCRWTIMSDSAAPIRASCGVQVLPGATF
LDPAGFDYVVVIGGLLAGLNQNAAPLCAYLKRAAAAGVKLVGICNGSFLLCQAGLMQGRRVCVSWLHYQDFRAAFPDHEV
TGDRLFEIDGDRITCAGGAGAADLAALLIERHLGSRLAQKPHQVLQLTRTRGEGAVQPHPPVAHEVADEQVRRALLMMEQ
NLSDPVPIATIARRLDLSTRQLERRFESALGQRPSLLYRTLRLRYARWLLETTGRSVTDIALEAGFSDCAHFSRQFKALH
GLSPSQMRPGMAGRDGGGAEAVAMHAGPRPF
>Mature_351_residues
MNGRAANAQRGEERRPLSVGILLAHDFTLSALSMFVDTLRLAADESDFSRPIHCRWTIMSDSAAPIRASCGVQVLPGATF
LDPAGFDYVVVIGGLLAGLNQNAAPLCAYLKRAAAAGVKLVGICNGSFLLCQAGLMQGRRVCVSWLHYQDFRAAFPDHEV
TGDRLFEIDGDRITCAGGAGAADLAALLIERHLGSRLAQKPHQVLQLTRTRGEGAVQPHPPVAHEVADEQVRRALLMMEQ
NLSDPVPIATIARRLDLSTRQLERRFESALGQRPSLLYRTLRLRYARWLLETTGRSVTDIALEAGFSDCAHFSRQFKALH
GLSPSQMRPGMAGRDGGGAEAVAMHAGPRPF

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790339, Length=102, Percent_Identity=39.2156862745098, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 38083; Mature: 38083

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGRAANAQRGEERRPLSVGILLAHDFTLSALSMFVDTLRLAADESDFSRPIHCRWTIMS
CCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEC
DSAAPIRASCGVQVLPGATFLDPAGFDYVVVIGGLLAGLNQNAAPLCAYLKRAAAAGVKL
CCCCCCCCCCCCEECCCCCEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEE
VGICNGSFLLCQAGLMQGRRVCVSWLHYQDFRAAFPDHEVTGDRLFEIDGDRITCAGGAG
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEECCCCC
AADLAALLIERHLGSRLAQKPHQVLQLTRTRGEGAVQPHPPVAHEVADEQVRRALLMMEQ
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
NLSDPVPIATIARRLDLSTRQLERRFESALGQRPSLLYRTLRLRYARWLLETTGRSVTDI
CCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH
ALEAGFSDCAHFSRQFKALHGLSPSQMRPGMAGRDGGGAEAVAMHAGPRPF
HHHCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MNGRAANAQRGEERRPLSVGILLAHDFTLSALSMFVDTLRLAADESDFSRPIHCRWTIMS
CCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEC
DSAAPIRASCGVQVLPGATFLDPAGFDYVVVIGGLLAGLNQNAAPLCAYLKRAAAAGVKL
CCCCCCCCCCCCEECCCCCEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEE
VGICNGSFLLCQAGLMQGRRVCVSWLHYQDFRAAFPDHEVTGDRLFEIDGDRITCAGGAG
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEECCCCC
AADLAALLIERHLGSRLAQKPHQVLQLTRTRGEGAVQPHPPVAHEVADEQVRRALLMMEQ
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
NLSDPVPIATIARRLDLSTRQLERRFESALGQRPSLLYRTLRLRYARWLLETTGRSVTDI
CCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH
ALEAGFSDCAHFSRQFKALHGLSPSQMRPGMAGRDGGGAEAVAMHAGPRPF
HHHCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]