| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148259878
Identifier: 148259878
GI number: 148259878
Start: 958169
End: 959686
Strand: Reverse
Name: 148259878
Synonym: Acry_0867
Alternate gene names: NA
Gene position: 959686-958169 (Counterclockwise)
Preceding gene: 148259880
Following gene: 148259877
Centisome position: 28.32
GC content: 70.22
Gene sequence:
>1518_bases ATGAAGCAGATGAAACCGGGCAGCGCGGCGCTGCTCGTCATTCTCGCCGCGACGCTGGCGCGGCTCGTCCTCGCCGCCGG CATGGGGCTCGGGATCGACGAGAGCTACATGGTCGCCGCCGCGCACACGTTCCAGCTTTCGTATTTCGACCATCCGCCGA TCTCGTGGTGGATGGAACTCGGCATCCAGCGGCTGACCGGGCTGCACTCGCCGTTCATCGTGCGGCTGCCGTTCATCGCG ATGTTCGCGGCGACGGGCGGGCTGATGTACGGGCTGACACGGCGGCTGTTCTCGCCGGCGGCGGGGCTGTGGGCGGTGAT CGGGCTGAACATCTCGCCGGTGTTCTCGCTCGCCTTCGGCACCTGGGTGCTGCCGGACGGGCCGCTCGACTTTTTCCTCG TCGGCGCCGCCTGGGCGCTGGCGCGGGCGCTGGGAATCGCGCGGCCGGAGATGGAGGCCACGCCGGATGCGGATTTCTGG CCGCTGGCGGGCATCCTGATCGGCCTCGCGATGACCTCGAAATACAATGCCGTGCTGGTGATGGCGGGGGCGCTGCTGTT CATGCTGGTGGATGCGCGGGCGCGGCGGGCGCTGGCGACGCCGGGGCCGTGGGTGGCCTGCGTGCTGGCGGCGGTGGTGT TCTCGCCGGTGGTGATCTGGAACGCGCTGAACGGCTGGGCGTCGTTCGGCTATCAGGGCGACCGGGCGACCGGGTTCGGG CTGCATCCGCTGCGGCCCTTCGCGATCTGGGGCGGCGAGGCGCTGTTCGTGGCCCCCTGGATCTTCGTGCCGATGGCCGC CCTGATGATCGGCGGGCTGCGGGGGAGCGACCGGCGGGCGCGGCTGCTGGCCTGGCTGGGCGTGGTGCCGGTGGCGCTGT TCTCGGTGATCGGGCTGTGGTCGTCGCGCAAGATTTTGTTCCACTGGGCGGCGCCGGGCTACCTGATGCTGTTCCCGCTG CTCGGCGACTGGGTAGTGCGGCAGGCGGGGACGATGCGGCTGTGGATCGGCCGGGCGGCGAAGGGAACGGCGGCGCTGCT GGTGGCGGCGGCGCTGTTCATCGCCCTGCAGGTGCGGTTCGGCGTCGTGCCGGGGTTCGATTCGATGTTTCCGCCCGGCA AGTCCCCCACGTTGCAGGCGATCGACTGGACCAGCTTCCGCACGGCGCTGAAGGCGCGCGGGCAGTTCGACCAGCCGGGG CTGGCGCTCGCCGCGCTGCGCTGGTTCGATGCCGGGAAGATCGCCTATGCGGTGGGGCCGAGCATGCGGATGACGGTGTT CGAGGGCGATCCGCACGAGTTCGGCGTGGTCACGCCGCCGCAATCGCTGATCGGCGAAAATATCCTGATCGCGGCGATGC CGGGATCGGTCGCGGCGATCGAGACGCGGTATGCGCCGCGGTTCCGCTCGATCACCGTGGAGCCGCCGATCGACATCGTC CATGACGGCCATGTGCTGCTGCGGATTCCGATGCTGCTGGGGCATCACCTGATGTCGTGGCCGGGGGCGCGGCGGTAG
Upstream 100 bases:
>100_bases CGGTGTTAGGGCGGGATTCGGCACCCGGCAAGTCAGGCTCGCGTGAGACCGGGGCGGCGGCGCTTGACCGGCCGGCACGG CTCGCCCATGCGGTGCGGTC
Downstream 100 bases:
>100_bases GCTTCCGCCGCCGGACCGGCTTCCTTGGTTGATCGGGGCATCAGCCATGCCCATTTCTCCCGGATGGGACCGAAGCTGAC GCGCGATCACGCGCTGTTCC
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Glycosyl Transferase Family; Glycosyl Transferase; Dolichyl-Phosphate-Mannose-Protein Mannosyltransferase; Dolichyl-Phosphate Beta-D-Mannosyltransferase; Glycosyltransferase; 4-Amino-4-Deoxy-L-Arabinose Transferase; Glycosyl/Arabinosyl/Mannosyl Transferase; Dolichyl-Phosphate Mannosyltransferase; Undecaprenyl-PhosphomannoseProtein Mannosyltransferase; Dolichol Monophosphate Mannose Synthase
Number of amino acids: Translated: 505; Mature: 505
Protein sequence:
>505_residues MKQMKPGSAALLVILAATLARLVLAAGMGLGIDESYMVAAAHTFQLSYFDHPPISWWMELGIQRLTGLHSPFIVRLPFIA MFAATGGLMYGLTRRLFSPAAGLWAVIGLNISPVFSLAFGTWVLPDGPLDFFLVGAAWALARALGIARPEMEATPDADFW PLAGILIGLAMTSKYNAVLVMAGALLFMLVDARARRALATPGPWVACVLAAVVFSPVVIWNALNGWASFGYQGDRATGFG LHPLRPFAIWGGEALFVAPWIFVPMAALMIGGLRGSDRRARLLAWLGVVPVALFSVIGLWSSRKILFHWAAPGYLMLFPL LGDWVVRQAGTMRLWIGRAAKGTAALLVAAALFIALQVRFGVVPGFDSMFPPGKSPTLQAIDWTSFRTALKARGQFDQPG LALAALRWFDAGKIAYAVGPSMRMTVFEGDPHEFGVVTPPQSLIGENILIAAMPGSVAAIETRYAPRFRSITVEPPIDIV HDGHVLLRIPMLLGHHLMSWPGARR
Sequences:
>Translated_505_residues MKQMKPGSAALLVILAATLARLVLAAGMGLGIDESYMVAAAHTFQLSYFDHPPISWWMELGIQRLTGLHSPFIVRLPFIA MFAATGGLMYGLTRRLFSPAAGLWAVIGLNISPVFSLAFGTWVLPDGPLDFFLVGAAWALARALGIARPEMEATPDADFW PLAGILIGLAMTSKYNAVLVMAGALLFMLVDARARRALATPGPWVACVLAAVVFSPVVIWNALNGWASFGYQGDRATGFG LHPLRPFAIWGGEALFVAPWIFVPMAALMIGGLRGSDRRARLLAWLGVVPVALFSVIGLWSSRKILFHWAAPGYLMLFPL LGDWVVRQAGTMRLWIGRAAKGTAALLVAAALFIALQVRFGVVPGFDSMFPPGKSPTLQAIDWTSFRTALKARGQFDQPG LALAALRWFDAGKIAYAVGPSMRMTVFEGDPHEFGVVTPPQSLIGENILIAAMPGSVAAIETRYAPRFRSITVEPPIDIV HDGHVLLRIPMLLGHHLMSWPGARR >Mature_505_residues MKQMKPGSAALLVILAATLARLVLAAGMGLGIDESYMVAAAHTFQLSYFDHPPISWWMELGIQRLTGLHSPFIVRLPFIA MFAATGGLMYGLTRRLFSPAAGLWAVIGLNISPVFSLAFGTWVLPDGPLDFFLVGAAWALARALGIARPEMEATPDADFW PLAGILIGLAMTSKYNAVLVMAGALLFMLVDARARRALATPGPWVACVLAAVVFSPVVIWNALNGWASFGYQGDRATGFG LHPLRPFAIWGGEALFVAPWIFVPMAALMIGGLRGSDRRARLLAWLGVVPVALFSVIGLWSSRKILFHWAAPGYLMLFPL LGDWVVRQAGTMRLWIGRAAKGTAALLVAAALFIALQVRFGVVPGFDSMFPPGKSPTLQAIDWTSFRTALKARGQFDQPG LALAALRWFDAGKIAYAVGPSMRMTVFEGDPHEFGVVTPPQSLIGENILIAAMPGSVAAIETRYAPRFRSITVEPPIDIV HDGHVLLRIPMLLGHHLMSWPGARR
Specific function: Unknown
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54555; Mature: 54555
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQMKPGSAALLVILAATLARLVLAAGMGLGIDESYMVAAAHTFQLSYFDHPPISWWMEL CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEECCCCCHHHHHHH GIQRLTGLHSPFIVRLPFIAMFAATGGLMYGLTRRLFSPAAGLWAVIGLNISPVFSLAFG HHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHC TWVLPDGPLDFFLVGAAWALARALGIARPEMEATPDADFWPLAGILIGLAMTSKYNAVLV CEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHH MAGALLFMLVDARARRALATPGPWVACVLAAVVFSPVVIWNALNGWASFGYQGDRATGFG HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC LHPLRPFAIWGGEALFVAPWIFVPMAALMIGGLRGSDRRARLLAWLGVVPVALFSVIGLW CCCCCCEEEECCCEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC SSRKILFHWAAPGYLMLFPLLGDWVVRQAGTMRLWIGRAAKGTAALLVAAALFIALQVRF CCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH GVVPGFDSMFPPGKSPTLQAIDWTSFRTALKARGQFDQPGLALAALRWFDAGKIAYAVGP CCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEECC SMRMTVFEGDPHEFGVVTPPQSLIGENILIAAMPGSVAAIETRYAPRFRSITVEPPIDIV CEEEEEEECCCCCCCCCCCCHHHHCCCEEEEECCCCEEEEECCCCCCCCEEEECCCCCEE HDGHVLLRIPMLLGHHLMSWPGARR ECCCCEEEEHHHHHHHHHCCCCCCC >Mature Secondary Structure MKQMKPGSAALLVILAATLARLVLAAGMGLGIDESYMVAAAHTFQLSYFDHPPISWWMEL CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEECCCCCHHHHHHH GIQRLTGLHSPFIVRLPFIAMFAATGGLMYGLTRRLFSPAAGLWAVIGLNISPVFSLAFG HHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHC TWVLPDGPLDFFLVGAAWALARALGIARPEMEATPDADFWPLAGILIGLAMTSKYNAVLV CEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHH MAGALLFMLVDARARRALATPGPWVACVLAAVVFSPVVIWNALNGWASFGYQGDRATGFG HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC LHPLRPFAIWGGEALFVAPWIFVPMAALMIGGLRGSDRRARLLAWLGVVPVALFSVIGLW CCCCCCEEEECCCEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC SSRKILFHWAAPGYLMLFPLLGDWVVRQAGTMRLWIGRAAKGTAALLVAAALFIALQVRF CCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH GVVPGFDSMFPPGKSPTLQAIDWTSFRTALKARGQFDQPGLALAALRWFDAGKIAYAVGP CCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEECC SMRMTVFEGDPHEFGVVTPPQSLIGENILIAAMPGSVAAIETRYAPRFRSITVEPPIDIV CEEEEEEECCCCCCCCCCCCHHHHCCCEEEEECCCCEEEEECCCCCCCCEEEECCCCCEE HDGHVLLRIPMLLGHHLMSWPGARR ECCCCEEEEHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA