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The map label for this gene is 148259880

Identifier: 148259880

GI number: 148259880

Start: 961321

End: 962010

Strand: Reverse

Name: 148259880

Synonym: Acry_0869

Alternate gene names: NA

Gene position: 962010-961321 (Counterclockwise)

Preceding gene: 148259881

Following gene: 148259878

Centisome position: 28.38

GC content: 68.7

Gene sequence:

>690_bases
ATGATCCGCGCCCTCGCCGCCCTGCTGCTCGCTGCCGGCCTCGCCCTGACCCCGGCCTTCGCCGCGAATGCCTTTGCCGC
GAATTCCGGGCCGGAGGCGCTGAGCGGCGTGCCGCTCGGCAAGGGCGGGGTGGTGGAGGTGAGCGGGCTGGTGCCGCCGC
TCGACTTCACCATGACCGAGGCGGAGACGGGAAAGACCGTCACCGCGCGGGATTTCCGCGGCCGGACGGTGCTGCTCTAT
TTCGGCTATACCAACTGCCCGGATGTCTGCCCCGACACGCTCTACAAGCTGCACATGCTGTTCCGCGCGCTCGGCCCGGC
GGCGAAGAAGGTGGTGTTCCTGTTCGTCACCATCGATCCGAAGCGGGACACGGACGCGGTGCTGGCGAAATATGTGGCGC
TGTTCGACAGCCACTTCCTCGGCCTGCGGGGCACGCCGGACCAGATCTACCGGCTGACGCGGCGCTATCGGGTGGTGGCC
TCGGTGCACCCCTCGCCCGATCCGCAGAAATACCAGGTGGTGCATTCGGCGCTGGTCTACGTGTTCGACCCGAAGGGACG
GGCGCGGTTCATCATTCCCGATCTCGGGCTGACGCGGCACCCGGACTACAAGGCGCTGGCCGCCGATATCGAGGCGGTGA
CCCGGAGCAAGCCCGGCAGTCTGGCCGGCTGGTTGGCGCGGCTCGGCTGA

Upstream 100 bases:

>100_bases
TCGGCTTCTTCGTCGGCCAGGTGATGAAGGCGATGCAGGGCAAGGGCAACCCGGCGCTGGTGAACGAGGCGCTGAAGCGG
AAGATCGGCGAGCCGGGCGC

Downstream 100 bases:

>100_bases
CGCGCCGGCCCGGTCCGCAGGGATCGGGACGCACGCTCTTCCGACGCGGGCGGGCCGGTCAGTCCGCTTCCGGCAGCGAG
GCGAGATACGCGGCGATGTC

Product: electron transport protein SCO1/SenC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MIRALAALLLAAGLALTPAFAANAFAANSGPEALSGVPLGKGGVVEVSGLVPPLDFTMTEAETGKTVTARDFRGRTVLLY
FGYTNCPDVCPDTLYKLHMLFRALGPAAKKVVFLFVTIDPKRDTDAVLAKYVALFDSHFLGLRGTPDQIYRLTRRYRVVA
SVHPSPDPQKYQVVHSALVYVFDPKGRARFIIPDLGLTRHPDYKALAADIEAVTRSKPGSLAGWLARLG

Sequences:

>Translated_229_residues
MIRALAALLLAAGLALTPAFAANAFAANSGPEALSGVPLGKGGVVEVSGLVPPLDFTMTEAETGKTVTARDFRGRTVLLY
FGYTNCPDVCPDTLYKLHMLFRALGPAAKKVVFLFVTIDPKRDTDAVLAKYVALFDSHFLGLRGTPDQIYRLTRRYRVVA
SVHPSPDPQKYQVVHSALVYVFDPKGRARFIIPDLGLTRHPDYKALAADIEAVTRSKPGSLAGWLARLG
>Mature_229_residues
MIRALAALLLAAGLALTPAFAANAFAANSGPEALSGVPLGKGGVVEVSGLVPPLDFTMTEAETGKTVTARDFRGRTVLLY
FGYTNCPDVCPDTLYKLHMLFRALGPAAKKVVFLFVTIDPKRDTDAVLAKYVALFDSHFLGLRGTPDQIYRLTRRYRVVA
SVHPSPDPQKYQVVHSALVYVFDPKGRARFIIPDLGLTRHPDYKALAADIEAVTRSKPGSLAGWLARLG

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SCO1/2 family [H]

Homologues:

Organism=Homo sapiens, GI281182727, Length=157, Percent_Identity=36.9426751592357, Blast_Score=104, Evalue=6e-23,
Organism=Homo sapiens, GI281182722, Length=157, Percent_Identity=36.9426751592357, Blast_Score=104, Evalue=6e-23,
Organism=Homo sapiens, GI281182716, Length=157, Percent_Identity=36.9426751592357, Blast_Score=104, Evalue=6e-23,
Organism=Homo sapiens, GI153791313, Length=157, Percent_Identity=36.9426751592357, Blast_Score=104, Evalue=6e-23,
Organism=Homo sapiens, GI4759068, Length=134, Percent_Identity=35.8208955223881, Blast_Score=97, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI17531419, Length=130, Percent_Identity=34.6153846153846, Blast_Score=97, Evalue=7e-21,
Organism=Saccharomyces cerevisiae, GI6319511, Length=186, Percent_Identity=34.4086021505376, Blast_Score=101, Evalue=9e-23,
Organism=Saccharomyces cerevisiae, GI6319498, Length=134, Percent_Identity=36.5671641791045, Blast_Score=92, Evalue=7e-20,
Organism=Drosophila melanogaster, GI19920710, Length=166, Percent_Identity=32.5301204819277, Blast_Score=105, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003782
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02630 SCO1-SenC [H]

EC number: NA

Molecular weight: Translated: 24770; Mature: 24770

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRALAALLLAAGLALTPAFAANAFAANSGPEALSGVPLGKGGVVEVSGLVPPLDFTMTE
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCEEEECCCCCCCCCEEEC
AETGKTVTARDFRGRTVLLYFGYTNCPDVCPDTLYKLHMLFRALGPAAKKVVFLFVTIDP
CCCCCEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCHHCEEEEEEEEEECC
KRDTDAVLAKYVALFDSHFLGLRGTPDQIYRLTRRYRVVASVHPSPDPQKYQVVHSALVY
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHEEEE
VFDPKGRARFIIPDLGLTRHPDYKALAADIEAVTRSKPGSLAGWLARLG
EECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCC
>Mature Secondary Structure
MIRALAALLLAAGLALTPAFAANAFAANSGPEALSGVPLGKGGVVEVSGLVPPLDFTMTE
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCEEEECCCCCCCCCEEEC
AETGKTVTARDFRGRTVLLYFGYTNCPDVCPDTLYKLHMLFRALGPAAKKVVFLFVTIDP
CCCCCEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCHHCEEEEEEEEEECC
KRDTDAVLAKYVALFDSHFLGLRGTPDQIYRLTRRYRVVASVHPSPDPQKYQVVHSALVY
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHEEEE
VFDPKGRARFIIPDLGLTRHPDYKALAADIEAVTRSKPGSLAGWLARLG
EECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]