| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
Click here to switch to the map view.
The map label for this gene is otsB [H]
Identifier: 148259877
GI number: 148259877
Start: 957395
End: 958105
Strand: Reverse
Name: otsB [H]
Synonym: Acry_0866
Alternate gene names: 148259877
Gene position: 958105-957395 (Counterclockwise)
Preceding gene: 148259878
Following gene: 148259876
Centisome position: 28.27
GC content: 75.81
Gene sequence:
>711_bases ATGGGACCGAAGCTGACGCGCGATCACGCGCTGTTCCTCGATCTGGACGGCACGTTGCTGGAGTTTGCCCCGACGGCGGA AGAGGTGGCGGTGCCCGCGGGGCTGGGGGCGATGCTGCGCGGGCTCGCGGCGCAGCGCGACGGGGCGCTGGCGATACTCT CGGGGCGGTCGCTCGCGCAGATCGACGCGGTGACCGCGGACCCCTTCCCCGCCGGCGCCGAGCATGGGTTCGTGCTGCGC GACGCGGCGGGGCGAATCCATCATCCGGTGCGGCAGACGGCCAACCGCGCGGCCTGGCGGGCGGCGCTGGAGGCGGCGGC GGCGGCGCATCCGGGCGTGCGGATCGAGGCGAAATCGGCCTCGCTGGTCGCGCATTACCGGGCGTCACCCGAGGCGGGGC CGGCGCTGGGCGCGATGATCGGCGCGATGATCGCGGAGGCGCCGGAGGTCGAGCGGCTGGCGGCGAACATGGCCTGGGAG ATCCGCCCGCGCGGCGCGGGCAAGGGGCGCGCGCTGGAATGGTTCATGGCGCGGCCGCCTTTCGCCGGGCGCGTGCCGGT CTTCGTCGGCGACGATGTGACCGACGAGGAGGCGATCGCGGCGGCGGCGGCGCTGGGCGGGCACGGGCTGCACGTTCACC GCGATTTCGACGGCACGCCGGCCGCGGTGCTGGCCTGGCTGGGCAGCGCGCTGGCGCCGGGGAGGGTGTGA
Upstream 100 bases:
>100_bases GCATCACCTGATGTCGTGGCCGGGGGCGCGGCGGTAGGCTTCCGCCGCCGGACCGGCTTCCTTGGTTGATCGGGGCATCA GCCATGCCCATTTCTCCCGG
Downstream 100 bases:
>100_bases GGATGGGGCGGCTCGTCGTCGTTTCGAACCGGGTGTCGCTGCCGACCGACAAGGGCGCGAGGGCCGGCGGGCTGGCCGTG GCGCTGGAGGACGCGATGAT
Product: HAD family hydrolase
Products: NA
Alternate protein names: TPP; Trehalose 6-phosphate phosphatase; Trehalose-phosphatase [H]
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MGPKLTRDHALFLDLDGTLLEFAPTAEEVAVPAGLGAMLRGLAAQRDGALAILSGRSLAQIDAVTADPFPAGAEHGFVLR DAAGRIHHPVRQTANRAAWRAALEAAAAAHPGVRIEAKSASLVAHYRASPEAGPALGAMIGAMIAEAPEVERLAANMAWE IRPRGAGKGRALEWFMARPPFAGRVPVFVGDDVTDEEAIAAAAALGGHGLHVHRDFDGTPAAVLAWLGSALAPGRV
Sequences:
>Translated_236_residues MGPKLTRDHALFLDLDGTLLEFAPTAEEVAVPAGLGAMLRGLAAQRDGALAILSGRSLAQIDAVTADPFPAGAEHGFVLR DAAGRIHHPVRQTANRAAWRAALEAAAAAHPGVRIEAKSASLVAHYRASPEAGPALGAMIGAMIAEAPEVERLAANMAWE IRPRGAGKGRALEWFMARPPFAGRVPVFVGDDVTDEEAIAAAAALGGHGLHVHRDFDGTPAAVLAWLGSALAPGRV >Mature_235_residues GPKLTRDHALFLDLDGTLLEFAPTAEEVAVPAGLGAMLRGLAAQRDGALAILSGRSLAQIDAVTADPFPAGAEHGFVLRD AAGRIHHPVRQTANRAAWRAALEAAAAAHPGVRIEAKSASLVAHYRASPEAGPALGAMIGAMIAEAPEVERLAANMAWEI RPRGAGKGRALEWFMARPPFAGRVPVFVGDDVTDEEAIAAAAALGGHGLHVHRDFDGTPAAVLAWLGSALAPGRV
Specific function: Removes the phosphate from trehalose 6-phosphate to produce free trehalose [H]
COG id: COG1877
COG function: function code G; Trehalose-6-phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trehalose phosphatase family [H]
Homologues:
Organism=Escherichia coli, GI1788207, Length=226, Percent_Identity=37.6106194690265, Blast_Score=137, Evalue=7e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006379 - InterPro: IPR003337 [H]
Pfam domain/function: PF02358 Trehalose_PPase [H]
EC number: =3.1.3.12 [H]
Molecular weight: Translated: 24393; Mature: 24262
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPKLTRDHALFLDLDGTLLEFAPTAEEVAVPAGLGAMLRGLAAQRDGALAILSGRSLAQ CCCCCCCCCEEEEECCCCEEECCCCHHHHCCCCCHHHHHHHHHHCCCCCEEEECCCCEEE IDAVTADPFPAGAEHGFVLRDAAGRIHHPVRQTANRAAWRAALEAAAAAHPGVRIEAKSA EEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC SLVAHYRASPEAGPALGAMIGAMIAEAPEVERLAANMAWEIRPRGAGKGRALEWFMARPP EEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCEEEEEECCCCCCCEEEEEECCCC FAGRVPVFVGDDVTDEEAIAAAAALGGHGLHVHRDFDGTPAAVLAWLGSALAPGRV CCCCCCEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure GPKLTRDHALFLDLDGTLLEFAPTAEEVAVPAGLGAMLRGLAAQRDGALAILSGRSLAQ CCCCCCCCEEEEECCCCEEECCCCHHHHCCCCCHHHHHHHHHHCCCCCEEEECCCCEEE IDAVTADPFPAGAEHGFVLRDAAGRIHHPVRQTANRAAWRAALEAAAAAHPGVRIEAKSA EEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC SLVAHYRASPEAGPALGAMIGAMIAEAPEVERLAANMAWEIRPRGAGKGRALEWFMARPP EEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCEEEEEECCCCCCCEEEEEECCCC FAGRVPVFVGDDVTDEEAIAAAAALGGHGLHVHRDFDGTPAAVLAWLGSALAPGRV CCCCCCEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677609 [H]