| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148243501
Identifier: 148243501
GI number: 148243501
Start: 2097922
End: 2098386
Strand: Direct
Name: 148243501
Synonym: SynRCC307_2402
Alternate gene names: NA
Gene position: 2097922-2098386 (Clockwise)
Preceding gene: 148243500
Following gene: 148243503
Centisome position: 94.29
GC content: 60.86
Gene sequence:
>465_bases ATGGAATCCCAAGTCAATTGGCTCACGCTCACCGACCTGGGACGCCGTTTTGGCCTCTCGGCCGTGAGCTGCGGCCGCAT GCTCAGCACCGCTGGCATGCGCGATGACGATGGACTGCCCAGCGATGTCGCCCTCGATGGTGGCTACGCCTACCGGCGCC CCGATCAAAATGCCAACCGCTCCGTGCTTTGGCATGAAGAGCGCTGCACCGAGCTGCTGCAAAGCCTGGGTTTGCACGCC ATTGATGAACAGCAGCTGGTGAGCCAGTGGGCCGATCTGCTCTCAGCCCTTGATGAAGGTTCACCCTCCATCAGCGCCTC AGCTGAGCAAATGGCTGAGGACATGCCCAAGCACCTAGTGGCTGCCGTCAATGCCCGGCTGCAATTGCTGGGCTGCGGCT TTCAGGTCAGTCAGTTCAAAACAGTGGCACAGGGCAGCTCTGGTAGCCGTACTGCTGCAACGTGA
Upstream 100 bases:
>100_bases TGAAGTTTTTTTAAATATGTTCGGTAATGCTGCGAAACCCTGTTGACAGGTTGCGCGCTTTTTCCCTCGCGTCAGCATTA AGGCATCCGACGAGGGTTTT
Downstream 100 bases:
>100_bases AGCTGCCGTAGTCGTGCAGGAACTCAACGCCCTGATCGCAGGGGTTGGCCACTTCGATCACCATCGGCTGCATCAGAACC GGATCAGGGGCTGCTGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MESQVNWLTLTDLGRRFGLSAVSCGRMLSTAGMRDDDGLPSDVALDGGYAYRRPDQNANRSVLWHEERCTELLQSLGLHA IDEQQLVSQWADLLSALDEGSPSISASAEQMAEDMPKHLVAAVNARLQLLGCGFQVSQFKTVAQGSSGSRTAAT
Sequences:
>Translated_154_residues MESQVNWLTLTDLGRRFGLSAVSCGRMLSTAGMRDDDGLPSDVALDGGYAYRRPDQNANRSVLWHEERCTELLQSLGLHA IDEQQLVSQWADLLSALDEGSPSISASAEQMAEDMPKHLVAAVNARLQLLGCGFQVSQFKTVAQGSSGSRTAAT >Mature_154_residues MESQVNWLTLTDLGRRFGLSAVSCGRMLSTAGMRDDDGLPSDVALDGGYAYRRPDQNANRSVLWHEERCTELLQSLGLHA IDEQQLVSQWADLLSALDEGSPSISASAEQMAEDMPKHLVAAVNARLQLLGCGFQVSQFKTVAQGSSGSRTAAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16613; Mature: 16613
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESQVNWLTLTDLGRRFGLSAVSCGRMLSTAGMRDDDGLPSDVALDGGYAYRRPDQNANR CCCCCCEEHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCC SVLWHEERCTELLQSLGLHAIDEQQLVSQWADLLSALDEGSPSISASAEQMAEDMPKHLV CEEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH AAVNARLQLLGCGFQVSQFKTVAQGSSGSRTAAT HHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MESQVNWLTLTDLGRRFGLSAVSCGRMLSTAGMRDDDGLPSDVALDGGYAYRRPDQNANR CCCCCCEEHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCC SVLWHEERCTELLQSLGLHAIDEQQLVSQWADLLSALDEGSPSISASAEQMAEDMPKHLV CEEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH AAVNARLQLLGCGFQVSQFKTVAQGSSGSRTAAT HHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA