| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148243503
Identifier: 148243503
GI number: 148243503
Start: 2098671
End: 2100776
Strand: Direct
Name: 148243503
Synonym: SynRCC307_2404
Alternate gene names: NA
Gene position: 2098671-2100776 (Clockwise)
Preceding gene: 148243501
Following gene: 148243507
Centisome position: 94.33
GC content: 64.2
Gene sequence:
>2106_bases ATGGCCCTGCAACGACGGCAGTTTTTGCTGTTGCTTGGTGCTGGAGTGGGCGGCGTTGCCTTGAGCACCACAACCGGTTG CAGCCAGCAGCAAACCCAGCTGCCCTTTGCACCCGTTCGCACGCCGTTGCCCTTACCAAGCGACGGATTAACCCCCAGCC AGCAACGCGAGGCCTACCGGGTGGTGCGCATCAACGATGCCCTCAGCCTGCCCGAGGGATACGACCAACAACTGCTCGCC AGCTGGGGCGACCCCGTTGGCTCCAGCCGCTTTGGCTTCAACAACGACTTCCTGGCCTTTCGCCAACTCGACACCAATAG CGCCCTACTGACCGTCAATTTCGAATACATCAGCCCGCTGCCCTGGAGCCAAGGCTTTGCGGAGGTCACCGGATCAACCC TGCCTTACGAACAAGTCGTGCAGGCACTCGCTGGCAGCAACGGCAAGCGCGATGTCTGGGCGGATGCACCGGCAGCAGAC GTAACAGCCGCCATCAACAGCGTTGCTGCAGAAGCTCTCGCCGATCAAGGGATCGGCGTGATCCGCCTGAAACGCGATGG CCAAGGCCGCTGGCAGCGGCAGCCCGGCCCAGAAGACCGCCGCATCACAGGCCTTGCTGGCCTCGATGATCCTGAGAGCC GCTTGCGCACCACCGGTCCTGCCAGCGCCGTCTTCCGTCTCGCCCAACGCCAGGGCTACGACGATGGCCTCGGGGATCGG ATCATTGGCACCTTCGCCAACTGCGCCGGCGGCACCACCCCCTGGGGCACGGTGCTCAGCGCTGAAGAGAACTTCCAAAG CCAAGTGCCAGAGGATGTCTACGCCGACGGCAGCGCCATGGCACCGTCAGCGCGGCCATTCACCTGTCAGGCCAAACGGC TCTATGGGTTGGGCAATCCCTTTGGCCTGGCTGGCAACAAGTACGGCTGGATGGTGGAAATCGATCCAGCCAACCCCGGC GACCCTGGCACGAAACACACCGCCCTCGGCCGCTTCCGCCATGAGGCTGTGGCCGTGCGAGCCCGCGCAGGGGAGCCGCT GCACGTTTACTCCGGCTGCGATCGCCGCGGCGGCCACCTCTACCGGTTCCTCAGCGATGGCATCGTCAACAACCCCAGTG ATCCAGCCAACAGCCGCCTGTTTCACAGCGGCACCCTCTATGGAGCTGTGTTCAACTCCGATGGCACCGGCAGCTGGGTG GCCCTCACAGCTAGCACCCCAGTGAACCCACTGCCGGCCCCAGTGAAGGTGCCCCACAGCGACCGCAAGCGGGCCGGCGC CGAGAGCCTCGATAGCCCCGCTGCCACTGCCGCCTACCGCCAGCGCTACTCAACCCTGGGCGATCTCTACGCAGGCGAAG GCGAGGCTCAACTCGGTGCTCTGTTGATCGATGCCCACCTGGCCGCCAATGCCGCTGGCATCACCCCCACAGCGCGGCCG GAAGACACGGTTCTTGACCCAGCGACTGGGGATTTGCTGGTGACCTTCACCTCAGGGATGCCCGGCAACGACGGCACTCC CGATCCAGCGATCTTCCGCGGTCCCCAAGGCCAAAGCCCCTGGAATGAGGGTTGGATCATGCGCCTCAGCGAGCAGGGCG AGAACCGCTTTCGCTGGCAGATGGTGGCCACCGGTGGCGAGCCAGCAGATGGTGGTTTGGGGTTTGCCAATCCCGACAAC CTGGCGGTGGATCCCACAGGCGCGCTGTGGATGGTCACCGACATCGGCACCGGCAGCCAGAACAACGACAAACAAAATGG CGGCGTCTTTGGCAACAACAGCTGCTGGGTGATTCCCACTAGCGGCAGCCAAGCCGGAGAGGCGTTCTGCTTTGCCACAG GACCCATGGAATGCGAGCTCACCGGCTTGGCCCTCACTCCCCAAGCTGATCAGCTGTTTTTAGCCGTGCAGCACCCTGGC GAGCGCCACGGCAGACGAGAGCAGAACGCCGAAGAAGCGCGCAGCTTTCAGCTGAAACTCACCAATGGCGAACCACTGGA GCAATTGCGCTGGGTTCCCCTGGGCTCCAACTGGCCGACCGGAGGCTTACCCAAGCCCGGCGTTGTGGTGATCCACCGCC GCAACGGCCAAGCGCTGCTCAGCTAA
Upstream 100 bases:
>100_bases ATTTTTCTTTAGCCAAGGATTCGGCCTTCGCGCCACTGCTTTGGGGAATGCTCACGATCCAATCCCTTTAGGCTCAAGGC CATCCCCAACCATCCCAGAC
Downstream 100 bases:
>100_bases GCCGCAGGGCCTCAGCTTGCTGCTTGGCCTGATCCAGCAACTCCTTGAGATGGTCTTCATCGGTGTGGCTGAGGTTGGTC TGCAGCAGTTGGGTATGGCC
Product: phosphatase
Products: NA
Alternate protein names: Phosphatase; Tat Pathway Signal Sequence Domain-Containing Protein; Tat Pathway Signal Sequence Domain Protein; Twin-Arginine Translocation Pathway Signal Protein; UxpB Protein; DTDP-Glucose 4 6-Dehydratase; Twin Arginine Translocation Pathway Signal Protein; DTDP-D-Glucose 4 6-Dehydratase; Glutamate-Cysteine Ligase/Putative Amino Acid Ligase; Alkaline Phosphatase Family Protein; Exported Protein
Number of amino acids: Translated: 701; Mature: 700
Protein sequence:
>701_residues MALQRRQFLLLLGAGVGGVALSTTTGCSQQQTQLPFAPVRTPLPLPSDGLTPSQQREAYRVVRINDALSLPEGYDQQLLA SWGDPVGSSRFGFNNDFLAFRQLDTNSALLTVNFEYISPLPWSQGFAEVTGSTLPYEQVVQALAGSNGKRDVWADAPAAD VTAAINSVAAEALADQGIGVIRLKRDGQGRWQRQPGPEDRRITGLAGLDDPESRLRTTGPASAVFRLAQRQGYDDGLGDR IIGTFANCAGGTTPWGTVLSAEENFQSQVPEDVYADGSAMAPSARPFTCQAKRLYGLGNPFGLAGNKYGWMVEIDPANPG DPGTKHTALGRFRHEAVAVRARAGEPLHVYSGCDRRGGHLYRFLSDGIVNNPSDPANSRLFHSGTLYGAVFNSDGTGSWV ALTASTPVNPLPAPVKVPHSDRKRAGAESLDSPAATAAYRQRYSTLGDLYAGEGEAQLGALLIDAHLAANAAGITPTARP EDTVLDPATGDLLVTFTSGMPGNDGTPDPAIFRGPQGQSPWNEGWIMRLSEQGENRFRWQMVATGGEPADGGLGFANPDN LAVDPTGALWMVTDIGTGSQNNDKQNGGVFGNNSCWVIPTSGSQAGEAFCFATGPMECELTGLALTPQADQLFLAVQHPG ERHGRREQNAEEARSFQLKLTNGEPLEQLRWVPLGSNWPTGGLPKPGVVVIHRRNGQALLS
Sequences:
>Translated_701_residues MALQRRQFLLLLGAGVGGVALSTTTGCSQQQTQLPFAPVRTPLPLPSDGLTPSQQREAYRVVRINDALSLPEGYDQQLLA SWGDPVGSSRFGFNNDFLAFRQLDTNSALLTVNFEYISPLPWSQGFAEVTGSTLPYEQVVQALAGSNGKRDVWADAPAAD VTAAINSVAAEALADQGIGVIRLKRDGQGRWQRQPGPEDRRITGLAGLDDPESRLRTTGPASAVFRLAQRQGYDDGLGDR IIGTFANCAGGTTPWGTVLSAEENFQSQVPEDVYADGSAMAPSARPFTCQAKRLYGLGNPFGLAGNKYGWMVEIDPANPG DPGTKHTALGRFRHEAVAVRARAGEPLHVYSGCDRRGGHLYRFLSDGIVNNPSDPANSRLFHSGTLYGAVFNSDGTGSWV ALTASTPVNPLPAPVKVPHSDRKRAGAESLDSPAATAAYRQRYSTLGDLYAGEGEAQLGALLIDAHLAANAAGITPTARP EDTVLDPATGDLLVTFTSGMPGNDGTPDPAIFRGPQGQSPWNEGWIMRLSEQGENRFRWQMVATGGEPADGGLGFANPDN LAVDPTGALWMVTDIGTGSQNNDKQNGGVFGNNSCWVIPTSGSQAGEAFCFATGPMECELTGLALTPQADQLFLAVQHPG ERHGRREQNAEEARSFQLKLTNGEPLEQLRWVPLGSNWPTGGLPKPGVVVIHRRNGQALLS >Mature_700_residues ALQRRQFLLLLGAGVGGVALSTTTGCSQQQTQLPFAPVRTPLPLPSDGLTPSQQREAYRVVRINDALSLPEGYDQQLLAS WGDPVGSSRFGFNNDFLAFRQLDTNSALLTVNFEYISPLPWSQGFAEVTGSTLPYEQVVQALAGSNGKRDVWADAPAADV TAAINSVAAEALADQGIGVIRLKRDGQGRWQRQPGPEDRRITGLAGLDDPESRLRTTGPASAVFRLAQRQGYDDGLGDRI IGTFANCAGGTTPWGTVLSAEENFQSQVPEDVYADGSAMAPSARPFTCQAKRLYGLGNPFGLAGNKYGWMVEIDPANPGD PGTKHTALGRFRHEAVAVRARAGEPLHVYSGCDRRGGHLYRFLSDGIVNNPSDPANSRLFHSGTLYGAVFNSDGTGSWVA LTASTPVNPLPAPVKVPHSDRKRAGAESLDSPAATAAYRQRYSTLGDLYAGEGEAQLGALLIDAHLAANAAGITPTARPE DTVLDPATGDLLVTFTSGMPGNDGTPDPAIFRGPQGQSPWNEGWIMRLSEQGENRFRWQMVATGGEPADGGLGFANPDNL AVDPTGALWMVTDIGTGSQNNDKQNGGVFGNNSCWVIPTSGSQAGEAFCFATGPMECELTGLALTPQADQLFLAVQHPGE RHGRREQNAEEARSFQLKLTNGEPLEQLRWVPLGSNWPTGGLPKPGVVVIHRRNGQALLS
Specific function: Unknown
COG id: COG3211
COG function: function code R; Predicted phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74590; Mature: 74459
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALQRRQFLLLLGAGVGGVALSTTTGCSQQQTQLPFAPVRTPLPLPSDGLTPSQQREAYR CCCCCCEEEEEEECCCCCEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHCCCEE VVRINDALSLPEGYDQQLLASWGDPVGSSRFGFNNDFLAFRQLDTNSALLTVNFEYISPL EEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEHEECCC PWSQGFAEVTGSTLPYEQVVQALAGSNGKRDVWADAPAADVTAAINSVAAEALADQGIGV CCCCCHHHHCCCCCCHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCEE IRLKRDGQGRWQRQPGPEDRRITGLAGLDDPESRLRTTGPASAVFRLAQRQGYDDGLGDR EEEEECCCCCCCCCCCCCCCEEEEECCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCH IIGTFANCAGGTTPWGTVLSAEENFQSQVPEDVYADGSAMAPSARPFTCQAKRLYGLGNP HHHHHHHHCCCCCCCCEEEECHHHHHHHCCHHHHCCCCCCCCCCCCCEEEHHHHCCCCCC FGLAGNKYGWMVEIDPANPGDPGTKHTALGRFRHEAVAVRARAGEPLHVYSGCDRRGGHL CCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHEEEEEECCCCCEEEECCCCCCCCEE YRFLSDGIVNNPSDPANSRLFHSGTLYGAVFNSDGTGSWVALTASTPVNPLPAPVKVPHS HEEHHCCCCCCCCCCCCCCEEECCEEEEEEECCCCCCCEEEEEECCCCCCCCCCEECCCC DRKRAGAESLDSPAATAAYRQRYSTLGDLYAGEGEAQLGALLIDAHLAANAAGITPTARP HHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHCCCCCCCCCCCC EDTVLDPATGDLLVTFTSGMPGNDGTPDPAIFRGPQGQSPWNEGWIMRLSEQGENRFRWQ CCCEECCCCCCEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCEEEEE MVATGGEPADGGLGFANPDNLAVDPTGALWMVTDIGTGSQNNDKQNGGVFGNNSCWVIPT EEECCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCEECCCCEEEEEC SGSQAGEAFCFATGPMECELTGLALTPQADQLFLAVQHPGERHGRREQNAEEARSFQLKL CCCCCCCEEEEECCCCEEEEEEEEECCCCCEEEEEEECCCHHCCCCCCCHHHHCEEEEEE TNGEPLEQLRWVPLGSNWPTGGLPKPGVVVIHRRNGQALLS CCCCCHHHEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCC >Mature Secondary Structure ALQRRQFLLLLGAGVGGVALSTTTGCSQQQTQLPFAPVRTPLPLPSDGLTPSQQREAYR CCCCCEEEEEEECCCCCEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHCCCEE VVRINDALSLPEGYDQQLLASWGDPVGSSRFGFNNDFLAFRQLDTNSALLTVNFEYISPL EEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEHEECCC PWSQGFAEVTGSTLPYEQVVQALAGSNGKRDVWADAPAADVTAAINSVAAEALADQGIGV CCCCCHHHHCCCCCCHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCEE IRLKRDGQGRWQRQPGPEDRRITGLAGLDDPESRLRTTGPASAVFRLAQRQGYDDGLGDR EEEEECCCCCCCCCCCCCCCEEEEECCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCH IIGTFANCAGGTTPWGTVLSAEENFQSQVPEDVYADGSAMAPSARPFTCQAKRLYGLGNP HHHHHHHHCCCCCCCCEEEECHHHHHHHCCHHHHCCCCCCCCCCCCCEEEHHHHCCCCCC FGLAGNKYGWMVEIDPANPGDPGTKHTALGRFRHEAVAVRARAGEPLHVYSGCDRRGGHL CCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHEEEEEECCCCCEEEECCCCCCCCEE YRFLSDGIVNNPSDPANSRLFHSGTLYGAVFNSDGTGSWVALTASTPVNPLPAPVKVPHS HEEHHCCCCCCCCCCCCCCEEECCEEEEEEECCCCCCCEEEEEECCCCCCCCCCEECCCC DRKRAGAESLDSPAATAAYRQRYSTLGDLYAGEGEAQLGALLIDAHLAANAAGITPTARP HHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHCCCCCCCCCCCC EDTVLDPATGDLLVTFTSGMPGNDGTPDPAIFRGPQGQSPWNEGWIMRLSEQGENRFRWQ CCCEECCCCCCEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCEEEEE MVATGGEPADGGLGFANPDNLAVDPTGALWMVTDIGTGSQNNDKQNGGVFGNNSCWVIPT EEECCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCEECCCCEEEEEC SGSQAGEAFCFATGPMECELTGLALTPQADQLFLAVQHPGERHGRREQNAEEARSFQLKL CCCCCCCEEEEECCCCEEEEEEEEECCCCCEEEEEEECCCHHCCCCCCCHHHHCEEEEEE TNGEPLEQLRWVPLGSNWPTGGLPKPGVVVIHRRNGQALLS CCCCCHHHEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA