| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148243500
Identifier: 148243500
GI number: 148243500
Start: 2097244
End: 2097867
Strand: Direct
Name: 148243500
Synonym: SynRCC307_2401
Alternate gene names: NA
Gene position: 2097244-2097867 (Clockwise)
Preceding gene: 148243499
Following gene: 148243501
Centisome position: 94.26
GC content: 60.9
Gene sequence:
>624_bases TTGCCGTCCACATCTCAAACAAGGCTGCTGCGCGCCTCACCGGAGGTGTTGTGGCGTGATCCAAGCCTCAGCGGCAGCTT CCTCCGGGGCCCCTGGCGGCTTTGGCTGCTGGGTGATGGCAGCCCCACGCGCCACCTGCAGCTCCTAACCGGCCATCCGG TGACCATTGATCTGGCGGCCATGGCTCCAGACACCGGCAGCGATTTGCACACCCCCAAGGAGGTGCAGGAGCTACAAGCC CCACTCCTGCGCCGCCAGGTGTGGCTCACCTGCGGCGGTGAAACCTTGGCCTGGGCCGAGAGCTGGTGGAACCAGCAGCA GGCCGAAGAACATCTCAAGGAAAAGGATCAACCGATCTGGCGCAGCCTCACCAGCAACCGCGCCGAGCTATTTCGCGAGG TGGATGGGGTAGCGCTGGTGCAAGCCGATTGGTTGCATGAGCGTTTGCAAGGGGAGGGTCCGTTTTGGAGCCGCCACTAC CGCTTCTTCCGCAAAGGCCAGCCCCTGACTGTGATCCGCGAGGTGTTTTCACCAAAATTGGAGCGCTGGCTGGGGCGGGC CATCGACGCAGAAAATAATGAAGTTTTTTTAAATATGTTCGGTAATGCTGCGAAACCCTGTTGA
Upstream 100 bases:
>100_bases GCAGGTCCAGGCCGATCGGGTGGTGATCCGCCAAGGCAACGACACGCTGCAACTGAGCCTGGGCCGTTAGCGTCAAAACA GCTGGCCTGGCATCAACGCT
Downstream 100 bases:
>100_bases CAGGTTGCGCGCTTTTTCCCTCGCGTCAGCATTAAGGCATCCGACGAGGGTTTTATGGAATCCCAAGTCAATTGGCTCAC GCTCACCGACCTGGGACGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MPSTSQTRLLRASPEVLWRDPSLSGSFLRGPWRLWLLGDGSPTRHLQLLTGHPVTIDLAAMAPDTGSDLHTPKEVQELQA PLLRRQVWLTCGGETLAWAESWWNQQQAEEHLKEKDQPIWRSLTSNRAELFREVDGVALVQADWLHERLQGEGPFWSRHY RFFRKGQPLTVIREVFSPKLERWLGRAIDAENNEVFLNMFGNAAKPC
Sequences:
>Translated_207_residues MPSTSQTRLLRASPEVLWRDPSLSGSFLRGPWRLWLLGDGSPTRHLQLLTGHPVTIDLAAMAPDTGSDLHTPKEVQELQA PLLRRQVWLTCGGETLAWAESWWNQQQAEEHLKEKDQPIWRSLTSNRAELFREVDGVALVQADWLHERLQGEGPFWSRHY RFFRKGQPLTVIREVFSPKLERWLGRAIDAENNEVFLNMFGNAAKPC >Mature_206_residues PSTSQTRLLRASPEVLWRDPSLSGSFLRGPWRLWLLGDGSPTRHLQLLTGHPVTIDLAAMAPDTGSDLHTPKEVQELQAP LLRRQVWLTCGGETLAWAESWWNQQQAEEHLKEKDQPIWRSLTSNRAELFREVDGVALVQADWLHERLQGEGPFWSRHYR FFRKGQPLTVIREVFSPKLERWLGRAIDAENNEVFLNMFGNAAKPC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23815; Mature: 23684
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSTSQTRLLRASPEVLWRDPSLSGSFLRGPWRLWLLGDGSPTRHLQLLTGHPVTIDLAA CCCCCCCEEEECCCCCEEECCCCCCCEECCCEEEEEEECCCCCCEEEEEECCCEEEEEEE MAPDTGSDLHTPKEVQELQAPLLRRQVWLTCGGETLAWAESWWNQQQAEEHLKEKDQPIW ECCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHCCHHHHHHHHHHCCCHHH RSLTSNRAELFREVDGVALVQADWLHERLQGEGPFWSRHYRFFRKGQPLTVIREVFSPKL HHHHHHHHHHHHHHCCEEEEHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH ERWLGRAIDAENNEVFLNMFGNAAKPC HHHHHHHCCCCCCEEEEEECCCCCCCC >Mature Secondary Structure PSTSQTRLLRASPEVLWRDPSLSGSFLRGPWRLWLLGDGSPTRHLQLLTGHPVTIDLAA CCCCCCEEEECCCCCEEECCCCCCCEECCCEEEEEEECCCCCCEEEEEECCCEEEEEEE MAPDTGSDLHTPKEVQELQAPLLRRQVWLTCGGETLAWAESWWNQQQAEEHLKEKDQPIW ECCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHCCHHHHHHHHHHCCCHHH RSLTSNRAELFREVDGVALVQADWLHERLQGEGPFWSRHYRFFRKGQPLTVIREVFSPKL HHHHHHHHHHHHHHCCEEEEHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH ERWLGRAIDAENNEVFLNMFGNAAKPC HHHHHHHCCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA