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The map label for this gene is usp

Identifier: 148243329

GI number: 148243329

Start: 1935260

End: 1935643

Strand: Direct

Name: usp

Synonym: SynRCC307_2230

Alternate gene names: NA

Gene position: 1935260-1935643 (Clockwise)

Preceding gene: 148243327

Following gene: 148243330

Centisome position: 86.98

GC content: 61.46

Gene sequence:

>384_bases
ATGTTCCGCACCGTTCTGTTTCCCTTTGACCAAAGCCGCGCAGCCATGGACATCGCGGCGACGGTGCTGCAGCTGGTGCA
GCAACACGACAGCAAGCTGGTATTGCTGTCCGTGGTGGAGGAAGGCAGCAACTCCATGGGGGATGTGGATGCCGTGGCGC
AGCTCCTGCAAAAAGCGCACGACACCTTTGCCGAAGCGGGCATCGAATGCGAACTGATCGAGCGGGAGGGCAAACCAGCC
TTTGTGATTGGCGATGTGGCCGATGAGATCGAGGCCGACTTGATCGTGATGGGCACCCGCGGCATCAACCTGGAGCAGGC
CAGCAGCAGCACCGCAGCACGGGTAATCCAGCTAGCCCCCTGCCCTGTTCTGGTGGTGCCGTGA

Upstream 100 bases:

>100_bases
GCGTGGGAGGTGGAAGCGCGGCGAGTTTACCCTTCAAACCTCGAGGCATTGATCGATGCCGGCGGCGAGCTAAGACAAAG
ACAGGGCCTTTGGCAGCGCC

Downstream 100 bases:

>100_bases
GCGCACCTGCGATCCAGTGGTATCCGGGCCACATTGCCAAGGCTGAACAGCAGCTCACCCAGCACCTCAGCAAGGTGGAT
TTGGTGATTGAGGTGCGCGA

Product: universal stress protein family protein

Products: NA

Alternate protein names: USP Sll1654 [H]

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MFRTVLFPFDQSRAAMDIAATVLQLVQQHDSKLVLLSVVEEGSNSMGDVDAVAQLLQKAHDTFAEAGIECELIEREGKPA
FVIGDVADEIEADLIVMGTRGINLEQASSSTAARVIQLAPCPVLVVP

Sequences:

>Translated_127_residues
MFRTVLFPFDQSRAAMDIAATVLQLVQQHDSKLVLLSVVEEGSNSMGDVDAVAQLLQKAHDTFAEAGIECELIEREGKPA
FVIGDVADEIEADLIVMGTRGINLEQASSSTAARVIQLAPCPVLVVP
>Mature_127_residues
MFRTVLFPFDQSRAAMDIAATVLQLVQQHDSKLVLLSVVEEGSNSMGDVDAVAQLLQKAHDTFAEAGIECELIEREGKPA
FVIGDVADEIEADLIVMGTRGINLEQASSSTAARVIQLAPCPVLVVP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 13593; Mature: 13593

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRTVLFPFDQSRAAMDIAATVLQLVQQHDSKLVLLSVVEEGSNSMGDVDAVAQLLQKAH
CCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH
DTFAEAGIECELIEREGKPAFVIGDVADEIEADLIVMGTRGINLEQASSSTAARVIQLAP
HHHHHCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCHHHHHEEEECC
CPVLVVP
CCEEEEC
>Mature Secondary Structure
MFRTVLFPFDQSRAAMDIAATVLQLVQQHDSKLVLLSVVEEGSNSMGDVDAVAQLLQKAH
CCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH
DTFAEAGIECELIEREGKPAFVIGDVADEIEADLIVMGTRGINLEQASSSTAARVIQLAP
HHHHHCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCHHHHHEEEECC
CPVLVVP
CCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]