| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148243327
Identifier: 148243327
GI number: 148243327
Start: 1933629
End: 1933847
Strand: Direct
Name: 148243327
Synonym: SynRCC307_2228
Alternate gene names: NA
Gene position: 1933629-1933847 (Clockwise)
Preceding gene: 148243325
Following gene: 148243329
Centisome position: 86.91
GC content: 61.19
Gene sequence:
>219_bases GTGGCCCCAACTTGGGTCAACAGTCCTGTGCTGATGGAGGCGCTGGAGCGCTACCAGCAAGGGCGCTTGCCGCAGCAGAT GCGCCACTGGATTCGAGCCCTATTGGAGCTCCCAGAGCACACCCCTGAACTGGCAGAGGAGCTTTTGGTTCAACGGCCAA ATAGCAGCCACAACAGCAGCACCACGGCGATGGTGATCACCCACCAGGGCAACCCCTGA
Upstream 100 bases:
>100_bases AGCCCCAAGACCGATGAAGCAAACCGGAATGTTTGCAGCCATGGCTTGCCGGCTCCAGGCCGAATCGCGACGATGCGGCC ATCGTGCTGCAGTCCGTGCC
Downstream 100 bases:
>100_bases CGGCGGCGGGTCCCACCAGAACCAGACCGACGCCCATGGCGCTTGTCCCAGAACTGACGGGAGAGATCTCGCTCGCGATC GGTGACCACCGGGTCTGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 71
Protein sequence:
>72_residues MAPTWVNSPVLMEALERYQQGRLPQQMRHWIRALLELPEHTPELAEELLVQRPNSSHNSSTTAMVITHQGNP
Sequences:
>Translated_72_residues MAPTWVNSPVLMEALERYQQGRLPQQMRHWIRALLELPEHTPELAEELLVQRPNSSHNSSTTAMVITHQGNP >Mature_71_residues APTWVNSPVLMEALERYQQGRLPQQMRHWIRALLELPEHTPELAEELLVQRPNSSHNSSTTAMVITHQGNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8269; Mature: 8137
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPTWVNSPVLMEALERYQQGRLPQQMRHWIRALLELPEHTPELAEELLVQRPNSSHNSS CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCC TTAMVITHQGNP CEEEEEEECCCC >Mature Secondary Structure APTWVNSPVLMEALERYQQGRLPQQMRHWIRALLELPEHTPELAEELLVQRPNSSHNSS CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCC TTAMVITHQGNP CEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA