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The map label for this gene is 148243205

Identifier: 148243205

GI number: 148243205

Start: 1822357

End: 1823841

Strand: Direct

Name: 148243205

Synonym: SynRCC307_2106

Alternate gene names: NA

Gene position: 1822357-1823841 (Clockwise)

Preceding gene: 148243203

Following gene: 148243207

Centisome position: 81.91

GC content: 64.85

Gene sequence:

>1485_bases
GTGGTGGTGTTAGGGGCCGGAATCGCCGGCCTGACCGCGGCAGCGCTGCTGGCCCGTCAGGGCTGTGACGTGGTGCTGCT
GGAAGCCCACCACCAAAGCGGTGGCTGCGCCGGCACTTTTCAGCGTGGCCCTTACACCTTCGATGCCGGAGCCACCCAGG
TGGCTGGCTTCGAGCCAGGCGGCAGCCATCAACGCCTGTTTGCCGTGCTGGGGGTGCCGCTGCCGCAGGCCACACCCCTT
GACCCCGGCTGCGTGGTGGATCTCGCCGATGGGCACCAGCCCGTTCGAATTTGGAGAGATCCAGAACGTTGGAGGCAGGA
ACGCGAGCAACAATTCCCAGGCAGTGAGCGCTTCTGGCAGCTCTGCCAGCGATTGCACGCCAGCAACTGGGCCTTCGCTG
CGCGCCGTCCGGTGCTCCCGCCTCGCAACGGCTGGGATCTCCACCAGCTGCTGGGAGCCATCGGCCCCGGCAATGTGCTC
AGCGGGCTGCTCACTGCAGCCACGGTGGCCGACCTCTTGCGGCTCTGCGGCTGCAGCGGCCCTAGGCACCAGCGGCTGCG
TCGGTTTTTGGATCTGCAGCTGAAGCTTTATTCCCAAGAGCCGGCCGATCGCACCGCAGCGCTCTACGGGGTCACGGTGC
TGGCGATGGTGCAGGAGCCCCTCGGGCTTTGGCACTTGCACGGCTCAATGCAAGCGCTCAGCAACAGCCTGGAAAGAGCT
CTGCACCAAGCCGGCGGTGAGCTGCGCCTGCGGCATCGGGTGGAGACCCTGCAAACCACCAACGACGGCTGGCAGGTGCA
GGGGTTAGGGCCCAAGGGGCAGAGCTTTTCTATCGGGGCTACCGATGTGGTGTGCAGCCTGCCGCCCCAAAGCTTGCCCA
ACTTGCTGGGCGATCAAATGCCAACAGGACTGCAGCGGCGGGTGGAAGGGCTAGGTGATCCCTCCGGAGCCTTGGTGCTC
TATGGCGCAGTGGCACGCGATGCCCTGCCCGCTGACTGCCCATCACACCTGCAATTGGATTGGCAACAGCCCGGCTCACT
GTTCATCTCCATTAGCCAAGAGGGCGATGGCCGCGCTCCAGCAGGGCAAGCAACGGTGATCGCCAGCGTGTTCACTAGCG
CCAAATGCTGGTTTGAGCTTGAGCCTGCGGCCTACATAACAGCCAAAGCCGAAGCCCAACAGGGCATTGAGGCAGGTCTG
AAACAACTGCTCGGCCTTCAAGACAGTCACTGGCTGCACCGCGAGCTGGCCACACCGCGAGGATTTGCGCGCTGGACAGG
CCGCCCCTTTGGCTTCGTTGGCGGCATCGGTCAGGCACCGGATCGCTTTGGCCCCTTCGGCCTGGCAAGCCGCAGCCCCT
TAGCCGGGCTCTGGCTCTGCGGTGATGCGATCTATCCCGGCGAAGGAACCGCTGGGGTGAGCCTCTCAGCAGAGATGGCA
GTGCGTCAGTTGCTCGCTCAAAGGAACGAAGGCCGAACGGCTTGA

Upstream 100 bases:

>100_bases
TGCAGCCAGGACTGCAGATCAAAGCTGCTCTCGCTCAACGCCCTGAGTTCCCAGACTGTGCTGCAGCAAGCCTGGCGGAA
CGACCCTGAGCTCAACAGAT

Downstream 100 bases:

>100_bases
GCCGAGGCCAACGCCTGCTGTAACCCCGTCCAGTCCTGCCCCTCCACCTGCTCAGCCAAGTGGTGCAAAGCCTTGCTGTA
GGCAGCCAAGGCCTGCTGAA

Product: phytoene dehydrogenase

Products: NA

Alternate protein names: C-3 4' Desaturase CrtD; Phytoene Dehydrogenase; FAD Dependent Oxidoreductase; Phytoene Dehydrogenase ; Carotene Isomerase; Lycopene Cyclase; Carotenoid Isomerase; Phytoene Dehydrogenase And Related Protein; Phytoene Dehydrogenase And Related Proteins; Phytoene Dehydrogenase-Like; Phytoene Dehydrogenase-Related Protein; Phytoene Dehydrogenase/Carotenoid Isomerase

Number of amino acids: Translated: 494; Mature: 494

Protein sequence:

>494_residues
MVVLGAGIAGLTAAALLARQGCDVVLLEAHHQSGGCAGTFQRGPYTFDAGATQVAGFEPGGSHQRLFAVLGVPLPQATPL
DPGCVVDLADGHQPVRIWRDPERWRQEREQQFPGSERFWQLCQRLHASNWAFAARRPVLPPRNGWDLHQLLGAIGPGNVL
SGLLTAATVADLLRLCGCSGPRHQRLRRFLDLQLKLYSQEPADRTAALYGVTVLAMVQEPLGLWHLHGSMQALSNSLERA
LHQAGGELRLRHRVETLQTTNDGWQVQGLGPKGQSFSIGATDVVCSLPPQSLPNLLGDQMPTGLQRRVEGLGDPSGALVL
YGAVARDALPADCPSHLQLDWQQPGSLFISISQEGDGRAPAGQATVIASVFTSAKCWFELEPAAYITAKAEAQQGIEAGL
KQLLGLQDSHWLHRELATPRGFARWTGRPFGFVGGIGQAPDRFGPFGLASRSPLAGLWLCGDAIYPGEGTAGVSLSAEMA
VRQLLAQRNEGRTA

Sequences:

>Translated_494_residues
MVVLGAGIAGLTAAALLARQGCDVVLLEAHHQSGGCAGTFQRGPYTFDAGATQVAGFEPGGSHQRLFAVLGVPLPQATPL
DPGCVVDLADGHQPVRIWRDPERWRQEREQQFPGSERFWQLCQRLHASNWAFAARRPVLPPRNGWDLHQLLGAIGPGNVL
SGLLTAATVADLLRLCGCSGPRHQRLRRFLDLQLKLYSQEPADRTAALYGVTVLAMVQEPLGLWHLHGSMQALSNSLERA
LHQAGGELRLRHRVETLQTTNDGWQVQGLGPKGQSFSIGATDVVCSLPPQSLPNLLGDQMPTGLQRRVEGLGDPSGALVL
YGAVARDALPADCPSHLQLDWQQPGSLFISISQEGDGRAPAGQATVIASVFTSAKCWFELEPAAYITAKAEAQQGIEAGL
KQLLGLQDSHWLHRELATPRGFARWTGRPFGFVGGIGQAPDRFGPFGLASRSPLAGLWLCGDAIYPGEGTAGVSLSAEMA
VRQLLAQRNEGRTA
>Mature_494_residues
MVVLGAGIAGLTAAALLARQGCDVVLLEAHHQSGGCAGTFQRGPYTFDAGATQVAGFEPGGSHQRLFAVLGVPLPQATPL
DPGCVVDLADGHQPVRIWRDPERWRQEREQQFPGSERFWQLCQRLHASNWAFAARRPVLPPRNGWDLHQLLGAIGPGNVL
SGLLTAATVADLLRLCGCSGPRHQRLRRFLDLQLKLYSQEPADRTAALYGVTVLAMVQEPLGLWHLHGSMQALSNSLERA
LHQAGGELRLRHRVETLQTTNDGWQVQGLGPKGQSFSIGATDVVCSLPPQSLPNLLGDQMPTGLQRRVEGLGDPSGALVL
YGAVARDALPADCPSHLQLDWQQPGSLFISISQEGDGRAPAGQATVIASVFTSAKCWFELEPAAYITAKAEAQQGIEAGL
KQLLGLQDSHWLHRELATPRGFARWTGRPFGFVGGIGQAPDRFGPFGLASRSPLAGLWLCGDAIYPGEGTAGVSLSAEMA
VRQLLAQRNEGRTA

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52957; Mature: 52957

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVLGAGIAGLTAAALLARQGCDVVLLEAHHQSGGCAGTFQRGPYTFDAGATQVAGFEPG
CEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCCEECCCCCC
GSHQRLFAVLGVPLPQATPLDPGCVVDLADGHQPVRIWRDPERWRQEREQQFPGSERFWQ
CCHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCEEEECCHHHHHHHHHHHCCCHHHHHH
LCQRLHASNWAFAARRPVLPPRNGWDLHQLLGAIGPGNVLSGLLTAATVADLLRLCGCSG
HHHHHHCCCCCHHHCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PRHQRLRRFLDLQLKLYSQEPADRTAALYGVTVLAMVQEPLGLWHLHGSMQALSNSLERA
HHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHH
LHQAGGELRLRHRVETLQTTNDGWQVQGLGPKGQSFSIGATDVVCSLPPQSLPNLLGDQM
HHHCCCCEEHHHHHHHHHCCCCCEEEEECCCCCCCEECCCHHEEEECCCHHHHHHHHHCC
PTGLQRRVEGLGDPSGALVLYGAVARDALPADCPSHLQLDWQQPGSLFISISQEGDGRAP
CHHHHHHHHHCCCCCCCEEEEEHHHHCCCCCCCCCCCEECCCCCCEEEEEEECCCCCCCC
AGQATVIASVFTSAKCWFELEPAAYITAKAEAQQGIEAGLKQLLGLQDSHWLHRELATPR
CCCHHHHHHHHHCCCEEEEECCCEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCC
GFARWTGRPFGFVGGIGQAPDRFGPFGLASRSPLAGLWLCGDAIYPGEGTAGVSLSAEMA
CCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEECCCCCCCCCCCHHHHH
VRQLLAQRNEGRTA
HHHHHHHCCCCCCC
>Mature Secondary Structure
MVVLGAGIAGLTAAALLARQGCDVVLLEAHHQSGGCAGTFQRGPYTFDAGATQVAGFEPG
CEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCCEECCCCCC
GSHQRLFAVLGVPLPQATPLDPGCVVDLADGHQPVRIWRDPERWRQEREQQFPGSERFWQ
CCHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCEEEECCHHHHHHHHHHHCCCHHHHHH
LCQRLHASNWAFAARRPVLPPRNGWDLHQLLGAIGPGNVLSGLLTAATVADLLRLCGCSG
HHHHHHCCCCCHHHCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PRHQRLRRFLDLQLKLYSQEPADRTAALYGVTVLAMVQEPLGLWHLHGSMQALSNSLERA
HHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHH
LHQAGGELRLRHRVETLQTTNDGWQVQGLGPKGQSFSIGATDVVCSLPPQSLPNLLGDQM
HHHCCCCEEHHHHHHHHHCCCCCEEEEECCCCCCCEECCCHHEEEECCCHHHHHHHHHCC
PTGLQRRVEGLGDPSGALVLYGAVARDALPADCPSHLQLDWQQPGSLFISISQEGDGRAP
CHHHHHHHHHCCCCCCCEEEEEHHHHCCCCCCCCCCCEECCCCCCEEEEEEECCCCCCCC
AGQATVIASVFTSAKCWFELEPAAYITAKAEAQQGIEAGLKQLLGLQDSHWLHRELATPR
CCCHHHHHHHHHCCCEEEEECCCEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCC
GFARWTGRPFGFVGGIGQAPDRFGPFGLASRSPLAGLWLCGDAIYPGEGTAGVSLSAEMA
CCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEECCCCCCCCCCCHHHHH
VRQLLAQRNEGRTA
HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA