| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148243203
Identifier: 148243203
GI number: 148243203
Start: 1821059
End: 1821454
Strand: Direct
Name: 148243203
Synonym: SynRCC307_2104
Alternate gene names: NA
Gene position: 1821059-1821454 (Clockwise)
Preceding gene: 148243199
Following gene: 148243205
Centisome position: 81.85
GC content: 60.35
Gene sequence:
>396_bases ATGACGGAGACCACCGAAGTCAAAACTGAGGCGCAGGAGGTGGTCGCTGAGACGACCGCCGATGGGGGCGTCGACCTGCA AGCCAAGGCAGGCGAGTTCAAGGAGCGCTACGCCGAAGTCCTCGGCAAAATCAACACCGCTCTCGACGGCGTCGATTGGA ATCAGATGGGCCGGATCGGCAAAGCCGCAGGCATCCTGATCGCCGTGATCGTGGCTCAGATCCTGATCAAAGGGGTTCTG GACACCATCAACCTGCTGCCTGTGGTTCCTGGACTGCTGGAACTGCTGGGCCTGGTGGTGGTTGGCAGCTGGAGCTGGAA CAACCTGCGCACCAGCACCAAACGCGAGGAGCTAGTCCAAAGCATCACCAAACTGCGTCAGGAGTACCTGGGCTGA
Upstream 100 bases:
>100_bases GCGCTCAAGAACCATCAGCCAATGCCCATTGAGCTCCAGCAGAGCTGGTGAAACCGGTTGGGGCTCGATAACTTGACCAG CAGATTCATTTCCAACCTCC
Downstream 100 bases:
>100_bases GGCTCAGAGCAACCGCAATAACGCCTCAACACTGCGGCGGCTCTGATCGATATAGGAGCCGCCAAACAGGTTGGCGTGAT TGAGGAGATGGAAAAGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MTETTEVKTEAQEVVAETTADGGVDLQAKAGEFKERYAEVLGKINTALDGVDWNQMGRIGKAAGILIAVIVAQILIKGVL DTINLLPVVPGLLELLGLVVVGSWSWNNLRTSTKREELVQSITKLRQEYLG
Sequences:
>Translated_131_residues MTETTEVKTEAQEVVAETTADGGVDLQAKAGEFKERYAEVLGKINTALDGVDWNQMGRIGKAAGILIAVIVAQILIKGVL DTINLLPVVPGLLELLGLVVVGSWSWNNLRTSTKREELVQSITKLRQEYLG >Mature_130_residues TETTEVKTEAQEVVAETTADGGVDLQAKAGEFKERYAEVLGKINTALDGVDWNQMGRIGKAAGILIAVIVAQILIKGVLD TINLLPVVPGLLELLGLVVVGSWSWNNLRTSTKREELVQSITKLRQEYLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14191; Mature: 14059
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETTEVKTEAQEVVAETTADGGVDLQAKAGEFKERYAEVLGKINTALDGVDWNQMGRIG CCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH KAAGILIAVIVAQILIKGVLDTINLLPVVPGLLELLGLVVVGSWSWNNLRTSTKREELVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH SITKLRQEYLG HHHHHHHHHCC >Mature Secondary Structure TETTEVKTEAQEVVAETTADGGVDLQAKAGEFKERYAEVLGKINTALDGVDWNQMGRIG CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH KAAGILIAVIVAQILIKGVLDTINLLPVVPGLLELLGLVVVGSWSWNNLRTSTKREELVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH SITKLRQEYLG HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA