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The map label for this gene is yoaA [C]

Identifier: 148243207

GI number: 148243207

Start: 1824737

End: 1826182

Strand: Direct

Name: yoaA [C]

Synonym: SynRCC307_2108

Alternate gene names: 148243207

Gene position: 1824737-1826182 (Clockwise)

Preceding gene: 148243205

Following gene: 148243208

Centisome position: 82.01

GC content: 65.21

Gene sequence:

>1446_bases
ATGCAGGAAGCCCAGGCCCACCACAAGCTCAAGCAGCTGCTGGGCAGCCGGGCTGGCTCCGGGTGGCCGCATGGGCTGAC
GCTGACTCGCCTGGTCGCCCGCAGCCTGCGGCGCTCTGACCACAGCCTCTTCCCGATTCGCGAAGGGCAACGCAGCGAGT
GGATGCTGAGCCTGCTGCTGCCAGCCGTCCTGAGCGAAGCGCCGATCGCCCTGGTGGCCAGCGAACCACTGCAACGCCGG
CTGCTCCTGCACGAACTACCGCTGCTCCGCAGTGCCGGCTTGGTGCGCCCCCTCTGGCAAGGCACAACAACTCCCGCAAG
TCCCTGCCTCTGGATGCTCTCGCCAGGGGACCTGGTGCAGGTGTGGCAAAGCAACCAGCTCGGCGAGCACCAGCTGCTGT
GCGCAGAAGCAGAACAACTCGAAGAATTGCTGGGCGACGGGCAAGCGGTCCGCATCGAGCCAGAGCACTGGGATCAACTC
TCCGCCAGCCAGCCACCCTTGCGCGAAGCCTTGGTTCAACTGCATGAGCGCCTCAGCCGGCAACTGCTCAACCGGCCCCT
GACACGGCAGCCCAAACTCGCCATCAGCCGTGAGCAGGAAGCCCCCTTGCGCTTGCTGCTGCAAGGCCGAACCGATCTCC
CCGGGCCCTGGCAACGCTGGCTTGATTGCGGCGATCAGAGCTGGACCAGCTGGGCGATCCCCGATGCAGGGCAACTGCGC
TGGAGCTTGGTGCGCCAACCCCTTCAGCCATTGCAAAGTCTCCACGGCGTGCTCGAGCAGCGCGGTGCCGTCCTGGCTGG
CAGCTGGGCACCCGAAGGGGTTCGTCTCGATGCGTTAGGCCTCGACGACCCTGTGGTGATCAGCCTTGGGGACGCCCAAC
GGGAGGAGGCACTGCCGCTATTTGCCCCACGCCAACAACCCTTCCCCAACAGCGCCGAATACGCCGGCCACCTGCTCGAT
CAATGCCGTCGGCTGGTCTTAGGGCAGGGGGGCTTAAGCATTGTGGTGATCGACGACAACCCGCTACGGCAATGGCTCAC
CAGCGCCTTAGCAGCGGAATTTGGAAGGCGTGTGGACCATGAGCAGACGGCGCCAGAGAGCAATGGGGTGGTCGTCTGCC
GCTGGCAGTGGTGGCTGCAAAACCATGAGCAACTTCCAGTGCCATGCCAGTTGGTGGTGGGATCGCTGCCGATAGCGAGC
CTGGAAGACCCACTCACCGCAGCCAGGGTGGAAGCCCTGCGCCGCGCCGGCCGCGATTGGTTCCGCGAATGGTTATTGCC
CGATGCCTGTGATCGCTTGCAGCGAAGCGTTGCGCCCTTACGCGGCCAGCAACCTCAGCCTCGTCTCGCCATCCTCGATG
GCCGATTGCGCAGCCGAAGCTGGGGGCAACAGCTGCTCAGCGCTCTTGAGCCCTGGGAGCGGCTCGAACAACTGAGACCC
GATTAG

Upstream 100 bases:

>100_bases
GCTTGACCAGCCAGACAGTCGGCCAACGACCTTGCAGTTGTCATCAAGCGCACCTCCTGCTCAGATCAGCTTCCTACGAT
CCGGCAACCCACAGTGGCGG

Downstream 100 bases:

>100_bases
CCTGGTTCTATGGGAGAAGCCAAACGTCGCGCTCAGCAGGGGTTGCCGCCGCGGGAGCCCAAACGCGAGAGCCCCAAAGA
CACCTCACCTCGCATCGTCA

Product: ATP-dependent DNA helicase

Products: NA

Alternate protein names: ATP-Dependent DNA Helicase; ATP-Dependent DNA Helicase DinG; Carboxyl-Terminal Protease; Rad3-Like DNA Helicase-Like Protein; DNA Helicase; Rad3-Related DNA Helicases

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MQEAQAHHKLKQLLGSRAGSGWPHGLTLTRLVARSLRRSDHSLFPIREGQRSEWMLSLLLPAVLSEAPIALVASEPLQRR
LLLHELPLLRSAGLVRPLWQGTTTPASPCLWMLSPGDLVQVWQSNQLGEHQLLCAEAEQLEELLGDGQAVRIEPEHWDQL
SASQPPLREALVQLHERLSRQLLNRPLTRQPKLAISREQEAPLRLLLQGRTDLPGPWQRWLDCGDQSWTSWAIPDAGQLR
WSLVRQPLQPLQSLHGVLEQRGAVLAGSWAPEGVRLDALGLDDPVVISLGDAQREEALPLFAPRQQPFPNSAEYAGHLLD
QCRRLVLGQGGLSIVVIDDNPLRQWLTSALAAEFGRRVDHEQTAPESNGVVVCRWQWWLQNHEQLPVPCQLVVGSLPIAS
LEDPLTAARVEALRRAGRDWFREWLLPDACDRLQRSVAPLRGQQPQPRLAILDGRLRSRSWGQQLLSALEPWERLEQLRP
D

Sequences:

>Translated_481_residues
MQEAQAHHKLKQLLGSRAGSGWPHGLTLTRLVARSLRRSDHSLFPIREGQRSEWMLSLLLPAVLSEAPIALVASEPLQRR
LLLHELPLLRSAGLVRPLWQGTTTPASPCLWMLSPGDLVQVWQSNQLGEHQLLCAEAEQLEELLGDGQAVRIEPEHWDQL
SASQPPLREALVQLHERLSRQLLNRPLTRQPKLAISREQEAPLRLLLQGRTDLPGPWQRWLDCGDQSWTSWAIPDAGQLR
WSLVRQPLQPLQSLHGVLEQRGAVLAGSWAPEGVRLDALGLDDPVVISLGDAQREEALPLFAPRQQPFPNSAEYAGHLLD
QCRRLVLGQGGLSIVVIDDNPLRQWLTSALAAEFGRRVDHEQTAPESNGVVVCRWQWWLQNHEQLPVPCQLVVGSLPIAS
LEDPLTAARVEALRRAGRDWFREWLLPDACDRLQRSVAPLRGQQPQPRLAILDGRLRSRSWGQQLLSALEPWERLEQLRP
D
>Mature_481_residues
MQEAQAHHKLKQLLGSRAGSGWPHGLTLTRLVARSLRRSDHSLFPIREGQRSEWMLSLLLPAVLSEAPIALVASEPLQRR
LLLHELPLLRSAGLVRPLWQGTTTPASPCLWMLSPGDLVQVWQSNQLGEHQLLCAEAEQLEELLGDGQAVRIEPEHWDQL
SASQPPLREALVQLHERLSRQLLNRPLTRQPKLAISREQEAPLRLLLQGRTDLPGPWQRWLDCGDQSWTSWAIPDAGQLR
WSLVRQPLQPLQSLHGVLEQRGAVLAGSWAPEGVRLDALGLDDPVVISLGDAQREEALPLFAPRQQPFPNSAEYAGHLLD
QCRRLVLGQGGLSIVVIDDNPLRQWLTSALAAEFGRRVDHEQTAPESNGVVVCRWQWWLQNHEQLPVPCQLVVGSLPIAS
LEDPLTAARVEALRRAGRDWFREWLLPDACDRLQRSVAPLRGQQPQPRLAILDGRLRSRSWGQQLLSALEPWERLEQLRP
D

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54182; Mature: 54182

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEAQAHHKLKQLLGSRAGSGWPHGLTLTRLVARSLRRSDHSLFPIREGQRSEWMLSLLL
CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
PAVLSEAPIALVASEPLQRRLLLHELPLLRSAGLVRPLWQGTTTPASPCLWMLSPGDLVQ
HHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCEEEEECCCHHHH
VWQSNQLGEHQLLCAEAEQLEELLGDGQAVRIEPEHWDQLSASQPPLREALVQLHERLSR
HHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHH
QLLNRPLTRQPKLAISREQEAPLRLLLQGRTDLPGPWQRWLDCGDQSWTSWAIPDAGQLR
HHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHH
WSLVRQPLQPLQSLHGVLEQRGAVLAGSWAPEGVRLDALGLDDPVVISLGDAQREEALPL
HHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEECCCCCEEEEECCCCHHCCCCC
FAPRQQPFPNSAEYAGHLLDQCRRLVLGQGGLSIVVIDDNPLRQWLTSALAAEFGRRVDH
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCC
EQTAPESNGVVVCRWQWWLQNHEQLPVPCQLVVGSLPIASLEDPLTAARVEALRRAGRDW
HHCCCCCCCEEEEEEEHHHCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
FREWLLPDACDRLQRSVAPLRGQQPQPRLAILDGRLRSRSWGQQLLSALEPWERLEQLRP
HHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC
D
C
>Mature Secondary Structure
MQEAQAHHKLKQLLGSRAGSGWPHGLTLTRLVARSLRRSDHSLFPIREGQRSEWMLSLLL
CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
PAVLSEAPIALVASEPLQRRLLLHELPLLRSAGLVRPLWQGTTTPASPCLWMLSPGDLVQ
HHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCEEEEECCCHHHH
VWQSNQLGEHQLLCAEAEQLEELLGDGQAVRIEPEHWDQLSASQPPLREALVQLHERLSR
HHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHH
QLLNRPLTRQPKLAISREQEAPLRLLLQGRTDLPGPWQRWLDCGDQSWTSWAIPDAGQLR
HHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHH
WSLVRQPLQPLQSLHGVLEQRGAVLAGSWAPEGVRLDALGLDDPVVISLGDAQREEALPL
HHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEECCCCCEEEEECCCCHHCCCCC
FAPRQQPFPNSAEYAGHLLDQCRRLVLGQGGLSIVVIDDNPLRQWLTSALAAEFGRRVDH
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCC
EQTAPESNGVVVCRWQWWLQNHEQLPVPCQLVVGSLPIASLEDPLTAARVEALRRAGRDW
HHCCCCCCCEEEEEEEHHHCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
FREWLLPDACDRLQRSVAPLRGQQPQPRLAILDGRLRSRSWGQQLLSALEPWERLEQLRP
HHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA