| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242907
Identifier: 148242907
GI number: 148242907
Start: 1571875
End: 1572498
Strand: Direct
Name: 148242907
Synonym: SynRCC307_1808
Alternate gene names: NA
Gene position: 1571875-1572498 (Clockwise)
Preceding gene: 148242906
Following gene: 148242908
Centisome position: 70.65
GC content: 64.74
Gene sequence:
>624_bases TTGAACCCGTTCGCGCCAGCAGCGGACCGGAACTCCCCCTGGCGAAATCCTGAGATGCGCCAGTTCGATCTGTTCACGTC CCAAGCCGGCCTGCAGCCCGATGCAGAGCTGCCCCTAAGCCCTGAGGTGCTGGCGGCCTGGCAGCAGCGGGTGTTGGTGT TTCAACATCAGCAACGCCAGCAGCCCAGCAACAACGCCCAGGGCAGCTTGTTTCGCCAACACGAGCCGAGCGAAGCTCCA CCAGAGCCCCTGAGCCTGCCCCCACAGCACCTGCTGTTCTGGCGCTGGCCAGACTCGCTGCAACAGGGGGCTGCCCTCTA TTTCGTGTTCGACCACAGCCGCGGCGATGGGCAGGAGCTGCTGCTGTATGTGGGAGAAACCTGCCAGGCCGATCGGCGCT GGAAGGGGGAGCACGATTGCAAGTCGTATTTGGCGGCCTACGGGGAAGCCCTGGTGCGCTGCGGTCAGCAGCCCCGCTTC ACGATCCGCTTCTGGTGTGATGCCCCCGCTGAGGCTCGCGCCCGCAGGCGCGTGGAGCAGCAACAGATTCGCCATTGGCT CCCGCCTTTCAATAAGGAGTGCCGCCAGCGCTGGCAGACACCGTTCCAGAGCGAGCTCCACTAA
Upstream 100 bases:
>100_bases CGCGAACGCAGCCGCCAGCCCTTCCGCGACATCGCTGATTTGCAGGAGCGCCTGCTACTTCCGGCCGGCGTGATCGAAGA GCTGATCGGCAAGGTCTGCT
Downstream 100 bases:
>100_bases TCAGGCAGCACCGGTACGATCGCGCGACCACCCCGTTGCGCCGTCATGAATTTCCGCTGCAGTTCCGCTCCCCTGGCGGA GCTCGGCTGTGATGGTGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MNPFAPAADRNSPWRNPEMRQFDLFTSQAGLQPDAELPLSPEVLAAWQQRVLVFQHQQRQQPSNNAQGSLFRQHEPSEAP PEPLSLPPQHLLFWRWPDSLQQGAALYFVFDHSRGDGQELLLYVGETCQADRRWKGEHDCKSYLAAYGEALVRCGQQPRF TIRFWCDAPAEARARRRVEQQQIRHWLPPFNKECRQRWQTPFQSELH
Sequences:
>Translated_207_residues MNPFAPAADRNSPWRNPEMRQFDLFTSQAGLQPDAELPLSPEVLAAWQQRVLVFQHQQRQQPSNNAQGSLFRQHEPSEAP PEPLSLPPQHLLFWRWPDSLQQGAALYFVFDHSRGDGQELLLYVGETCQADRRWKGEHDCKSYLAAYGEALVRCGQQPRF TIRFWCDAPAEARARRRVEQQQIRHWLPPFNKECRQRWQTPFQSELH >Mature_207_residues MNPFAPAADRNSPWRNPEMRQFDLFTSQAGLQPDAELPLSPEVLAAWQQRVLVFQHQQRQQPSNNAQGSLFRQHEPSEAP PEPLSLPPQHLLFWRWPDSLQQGAALYFVFDHSRGDGQELLLYVGETCQADRRWKGEHDCKSYLAAYGEALVRCGQQPRF TIRFWCDAPAEARARRRVEQQQIRHWLPPFNKECRQRWQTPFQSELH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24256; Mature: 24256
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPFAPAADRNSPWRNPEMRQFDLFTSQAGLQPDAELPLSPEVLAAWQQRVLVFQHQQRQ CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC QPSNNAQGSLFRQHEPSEAPPEPLSLPPQHLLFWRWPDSLQQGAALYFVFDHSRGDGQEL CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEECCHHHHCCCEEEEEEECCCCCCCEE LLYVGETCQADRRWKGEHDCKSYLAAYGEALVRCGQQPRFTIRFWCDAPAEARARRRVEQ EEEECCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHH QQIRHWLPPFNKECRQRWQTPFQSELH HHHHHHCCCCCHHHHHHHCCCCHHCCC >Mature Secondary Structure MNPFAPAADRNSPWRNPEMRQFDLFTSQAGLQPDAELPLSPEVLAAWQQRVLVFQHQQRQ CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC QPSNNAQGSLFRQHEPSEAPPEPLSLPPQHLLFWRWPDSLQQGAALYFVFDHSRGDGQEL CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEECCHHHHCCCEEEEEEECCCCCCCEE LLYVGETCQADRRWKGEHDCKSYLAAYGEALVRCGQQPRFTIRFWCDAPAEARARRRVEQ EEEECCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHH QQIRHWLPPFNKECRQRWQTPFQSELH HHHHHHCCCCCHHHHHHHCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA