Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242907

Identifier: 148242907

GI number: 148242907

Start: 1571875

End: 1572498

Strand: Direct

Name: 148242907

Synonym: SynRCC307_1808

Alternate gene names: NA

Gene position: 1571875-1572498 (Clockwise)

Preceding gene: 148242906

Following gene: 148242908

Centisome position: 70.65

GC content: 64.74

Gene sequence:

>624_bases
TTGAACCCGTTCGCGCCAGCAGCGGACCGGAACTCCCCCTGGCGAAATCCTGAGATGCGCCAGTTCGATCTGTTCACGTC
CCAAGCCGGCCTGCAGCCCGATGCAGAGCTGCCCCTAAGCCCTGAGGTGCTGGCGGCCTGGCAGCAGCGGGTGTTGGTGT
TTCAACATCAGCAACGCCAGCAGCCCAGCAACAACGCCCAGGGCAGCTTGTTTCGCCAACACGAGCCGAGCGAAGCTCCA
CCAGAGCCCCTGAGCCTGCCCCCACAGCACCTGCTGTTCTGGCGCTGGCCAGACTCGCTGCAACAGGGGGCTGCCCTCTA
TTTCGTGTTCGACCACAGCCGCGGCGATGGGCAGGAGCTGCTGCTGTATGTGGGAGAAACCTGCCAGGCCGATCGGCGCT
GGAAGGGGGAGCACGATTGCAAGTCGTATTTGGCGGCCTACGGGGAAGCCCTGGTGCGCTGCGGTCAGCAGCCCCGCTTC
ACGATCCGCTTCTGGTGTGATGCCCCCGCTGAGGCTCGCGCCCGCAGGCGCGTGGAGCAGCAACAGATTCGCCATTGGCT
CCCGCCTTTCAATAAGGAGTGCCGCCAGCGCTGGCAGACACCGTTCCAGAGCGAGCTCCACTAA

Upstream 100 bases:

>100_bases
CGCGAACGCAGCCGCCAGCCCTTCCGCGACATCGCTGATTTGCAGGAGCGCCTGCTACTTCCGGCCGGCGTGATCGAAGA
GCTGATCGGCAAGGTCTGCT

Downstream 100 bases:

>100_bases
TCAGGCAGCACCGGTACGATCGCGCGACCACCCCGTTGCGCCGTCATGAATTTCCGCTGCAGTTCCGCTCCCCTGGCGGA
GCTCGGCTGTGATGGTGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MNPFAPAADRNSPWRNPEMRQFDLFTSQAGLQPDAELPLSPEVLAAWQQRVLVFQHQQRQQPSNNAQGSLFRQHEPSEAP
PEPLSLPPQHLLFWRWPDSLQQGAALYFVFDHSRGDGQELLLYVGETCQADRRWKGEHDCKSYLAAYGEALVRCGQQPRF
TIRFWCDAPAEARARRRVEQQQIRHWLPPFNKECRQRWQTPFQSELH

Sequences:

>Translated_207_residues
MNPFAPAADRNSPWRNPEMRQFDLFTSQAGLQPDAELPLSPEVLAAWQQRVLVFQHQQRQQPSNNAQGSLFRQHEPSEAP
PEPLSLPPQHLLFWRWPDSLQQGAALYFVFDHSRGDGQELLLYVGETCQADRRWKGEHDCKSYLAAYGEALVRCGQQPRF
TIRFWCDAPAEARARRRVEQQQIRHWLPPFNKECRQRWQTPFQSELH
>Mature_207_residues
MNPFAPAADRNSPWRNPEMRQFDLFTSQAGLQPDAELPLSPEVLAAWQQRVLVFQHQQRQQPSNNAQGSLFRQHEPSEAP
PEPLSLPPQHLLFWRWPDSLQQGAALYFVFDHSRGDGQELLLYVGETCQADRRWKGEHDCKSYLAAYGEALVRCGQQPRF
TIRFWCDAPAEARARRRVEQQQIRHWLPPFNKECRQRWQTPFQSELH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24256; Mature: 24256

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPFAPAADRNSPWRNPEMRQFDLFTSQAGLQPDAELPLSPEVLAAWQQRVLVFQHQQRQ
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
QPSNNAQGSLFRQHEPSEAPPEPLSLPPQHLLFWRWPDSLQQGAALYFVFDHSRGDGQEL
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEECCHHHHCCCEEEEEEECCCCCCCEE
LLYVGETCQADRRWKGEHDCKSYLAAYGEALVRCGQQPRFTIRFWCDAPAEARARRRVEQ
EEEECCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHH
QQIRHWLPPFNKECRQRWQTPFQSELH
HHHHHHCCCCCHHHHHHHCCCCHHCCC
>Mature Secondary Structure
MNPFAPAADRNSPWRNPEMRQFDLFTSQAGLQPDAELPLSPEVLAAWQQRVLVFQHQQRQ
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
QPSNNAQGSLFRQHEPSEAPPEPLSLPPQHLLFWRWPDSLQQGAALYFVFDHSRGDGQEL
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEECCHHHHCCCEEEEEEECCCCCCCEE
LLYVGETCQADRRWKGEHDCKSYLAAYGEALVRCGQQPRFTIRFWCDAPAEARARRRVEQ
EEEECCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHH
QQIRHWLPPFNKECRQRWQTPFQSELH
HHHHHHCCCCCHHHHHHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA