Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242906

Identifier: 148242906

GI number: 148242906

Start: 1571340

End: 1571927

Strand: Direct

Name: 148242906

Synonym: SynRCC307_1807

Alternate gene names: NA

Gene position: 1571340-1571927 (Clockwise)

Preceding gene: 148242903

Following gene: 148242907

Centisome position: 70.62

GC content: 65.65

Gene sequence:

>588_bases
ATGGCTCGGCCGCGCCACTGGCTGGATCCACTGGCTCGCCGCCTGCTCCAGGCCACTGGCGAACTGCCCAGCCCGCCCAA
ACCGCTGAAACCCGTCGCCCCGCTGGTGTTCGACAGCCCAACGGTCGACACCTGGCAAATCGATGTGAACCGGGCCAGCC
ACAGCGACTGGCTCAAGCTGCCGGGCTGCAGCAGCGAGCAAGCCGATCTCTTGGTGCGGCTGCAACGGGGCGGGGTGCAA
TTCAGCGGCGCCGATGACCTGGCGCGGTTGCTGGAACTCAGCGCTGGGCAAATGCAGCTGTGGCAGCCCCACCTGCTGTT
CCGCTGGTACAGCGAACCACCCAATCCAGTGGCTGCAGTCCTTGATCTCAACAACGCCAGCAGCCTGCAACTGCAGGCCC
TGGGATTAAGCCCCGAGCGGCAACAACGGCTGCTGCGCGAACGCAGCCGCCAGCCCTTCCGCGACATCGCTGATTTGCAG
GAGCGCCTGCTACTTCCGGCCGGCGTGATCGAAGAGCTGATCGGCAAGGTCTGCTTTGAACCCGTTCGCGCCAGCAGCGG
ACCGGAACTCCCCCTGGCGAAATCCTGA

Upstream 100 bases:

>100_bases
TGGCCGATCCTTTCTGCACGCCATTCTGAGCGGCCCACAGCCTCTGGCCAGGGCGGTTCTCCGACCGGATACTGGCTCAT
CGATTGCATTGCCTTCGCCC

Downstream 100 bases:

>100_bases
GATGCGCCAGTTCGATCTGTTCACGTCCCAAGCCGGCCTGCAGCCCGATGCAGAGCTGCCCCTAAGCCCTGAGGTGCTGG
CGGCCTGGCAGCAGCGGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MARPRHWLDPLARRLLQATGELPSPPKPLKPVAPLVFDSPTVDTWQIDVNRASHSDWLKLPGCSSEQADLLVRLQRGGVQ
FSGADDLARLLELSAGQMQLWQPHLLFRWYSEPPNPVAAVLDLNNASSLQLQALGLSPERQQRLLRERSRQPFRDIADLQ
ERLLLPAGVIEELIGKVCFEPVRASSGPELPLAKS

Sequences:

>Translated_195_residues
MARPRHWLDPLARRLLQATGELPSPPKPLKPVAPLVFDSPTVDTWQIDVNRASHSDWLKLPGCSSEQADLLVRLQRGGVQ
FSGADDLARLLELSAGQMQLWQPHLLFRWYSEPPNPVAAVLDLNNASSLQLQALGLSPERQQRLLRERSRQPFRDIADLQ
ERLLLPAGVIEELIGKVCFEPVRASSGPELPLAKS
>Mature_194_residues
ARPRHWLDPLARRLLQATGELPSPPKPLKPVAPLVFDSPTVDTWQIDVNRASHSDWLKLPGCSSEQADLLVRLQRGGVQF
SGADDLARLLELSAGQMQLWQPHLLFRWYSEPPNPVAAVLDLNNASSLQLQALGLSPERQQRLLRERSRQPFRDIADLQE
RLLLPAGVIEELIGKVCFEPVRASSGPELPLAKS

Specific function: Unknown

COG id: COG1555

COG function: function code L; DNA uptake protein and related DNA-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21769; Mature: 21638

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARPRHWLDPLARRLLQATGELPSPPKPLKPVAPLVFDSPTVDTWQIDVNRASHSDWLKL
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCEEEEEECCCCCCCCEEC
PGCSSEQADLLVRLQRGGVQFSGADDLARLLELSAGQMQLWQPHLLFRWYSEPPNPVAAV
CCCCCHHHHHHHHHHHCCEEECCHHHHHHHHHHCCCCHHHCCHHHHEEECCCCCCCEEEE
LDLNNASSLQLQALGLSPERQQRLLRERSRQPFRDIADLQERLLLPAGVIEELIGKVCFE
EECCCCCCEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
PVRASSGPELPLAKS
HHHCCCCCCCCCCCC
>Mature Secondary Structure 
ARPRHWLDPLARRLLQATGELPSPPKPLKPVAPLVFDSPTVDTWQIDVNRASHSDWLKL
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCEEEEEECCCCCCCCEEC
PGCSSEQADLLVRLQRGGVQFSGADDLARLLELSAGQMQLWQPHLLFRWYSEPPNPVAAV
CCCCCHHHHHHHHHHHCCEEECCHHHHHHHHHHCCCCHHHCCHHHHEEECCCCCCCEEEE
LDLNNASSLQLQALGLSPERQQRLLRERSRQPFRDIADLQERLLLPAGVIEELIGKVCFE
EECCCCCCEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
PVRASSGPELPLAKS
HHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA