| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242806
Identifier: 148242806
GI number: 148242806
Start: 1490969
End: 1492900
Strand: Direct
Name: 148242806
Synonym: SynRCC307_1707
Alternate gene names: NA
Gene position: 1490969-1492900 (Clockwise)
Preceding gene: 148242804
Following gene: 148242807
Centisome position: 67.01
GC content: 64.54
Gene sequence:
>1932_bases GTGGAACTCCCCCTCGACCATTTCCGACTGTTGGGGGTGAGCCCGGTTGCCACCGAGGAGTTGGTGCTGCGCACCTTGAG TCAGCGACTGGACCGGCCGCCTGAAGGCGGCTTCACCACAGACGCCCTGGAGTGCCGCGCTGAGCTACTGCGGGGCAGCG CTGATCTGCTCTGCGACAGCGAGCGCCGTGAGGAATACGAGTGCCTCCTCACCCAGCTCAACGCCGAGGGCCCCGACACG CTGCCAGCGTTGGAGGTGCCGTCCAGCCAGGAAGTGGGCGGCCTCATCCTCTTAATGGAAGCCGGCCAAGCCGCCGAAGC CTTTGAAGGGGCCCGCCAGGCGCTGCAACCACCCCAAGCCCCAGCCCTGGGCAGCAACCGCGAAGCCGATCTCTCGCTGC TGGCGGCCATCTCGGCTCAAAAGGCCGGGCAAGAGCGCTGCCGCGATCGCCGCTTTGAAAGCGCCGCGCAGATCCTGCAC AACGGCATCCAACTGCTGCAGCGCATGGGCCAGCAGCACGAGCAACGGGTGCGCCTCGAGAGCGACCTCAATGCCCTGCT GCCCTACCGGATCCTGGATCTGATCAGCCGCGATCTGGCTGAAAGCGGTAGCCGCGAATTTGGCCGCGATCTGCTCGATC AATTGGTGCAGCGACGCGGCGGCCTCGATGGCGATCAAGATCCGGAGTTCCCGCAGGAATCGTTCCAGTCCTTTTTCCAG CAGATCCGCGGTTTCCTCACCGTGCAAGAGCAGATCGATCTGTTCCTGCAGTGGGGTGAAAACGGCTCGGTGACCGCCGA ATTCCTCAGCGCCTATGCCCTGACAGCCTCCGGCTTTGCCCAGCGCAAACCCGAGCGGATCAGCTCGGCCCTCGAGCGGC TGCAAGCCATGCGCGATGTGGGCGTCGATGCCGAAATGGCCTGCCTGCATCTGCTTCTCGGCCAAACCGATGAAGCAGCG GTCTGCTTTGAGCGCGGCAGCGATGCGGCCCTCAAGGCCTGGGCCAAAGAACAGGGCAGCGATCCCCTAGCCGGCCTGTG CGTGTATTGCAGCGACTGGCTCAAGCGCCAAGTTCTGCCTTGCTACCGCGACCTTGAGGCCGACCCCGATCTTGAGGCCT ATTTCGCCGATCGCGATGTGCAGGCGTTCATCGAAAGCAGCGACCGCAACCGTCAGCGCGCCGGCGTCAGCCCCAGCGCG CCGATCACCAGCTTTGAAGTGCTGCCCACCCCTGATCCCAGCGAGATCGAAGAGATCCTCGAGCCGCTGAGCAGCAGCGA AGAAGACGCCACACCCGTCTGGCGCCTGTGGCAAGAGCAGGCCCAACAGGCCGCAGCCCAACTGCAGCAGTGGCAGAGCG AACTCCAAGAGCGCCTGCAAGCCACCACGGGCAAACAGCGCTCGATTGCAGCGGCCTCCGCCGCCGGCCTCACTGCTGCA TTGATTGCTGGGGTGGCCATCAGCCAGCGCCCCAGCATTCCGGCCCGCGAAGCCCTGCTGCTGCCAGAAGCCCCCCTGGA GCTCGATAGCCCCTTGGCAAAGCTCAACAGCGCCACACCAGCGGAGGAAACCGAAGTTCTGCTGCAGCTGTGGCTCGACA CCAAAGCCACGCTGCTTGATGGCACCGCCTCAGCCGATCAGCTCCAGGCATTGGCGAGCGCCGAACTGGTGCAATACGCC AAGGCCGGCCGGGCCCTCGATGCCTCCAGCGGCAAGCGCCGCAAGGTGAATGCCCGGGTTCAGGAGCTGGAGCTCAGCAG CGAAACCCCAGAACGGCGTGTGGCCAAAGCCACGATCCAATACGAGGAGAAGGTGCTCAGCGACGACGGTGAGCTGCTGG GCCAAGTGGAGCCCAAGCAGATCAAAAACACCTACGTGTACGAGAAAAAAGGCGACAGCTGGCAGCTGACCGACTTCCGC CCCAGCATCTAG
Upstream 100 bases:
>100_bases GGCGGCGGCGGTCTCCGTGGTCATCAAACTTGACCCGTTGCAGGAACGGACTTTACCGCTGAAGCCCCTTAAACTCCGCA CCTGTTTTAAGTAGGTAGCG
Downstream 100 bases:
>100_bases CGCTGAGCTGATTCCTACGATGGAGGGCTTGTAGCCCTGGATTGGCGGCGCTGATGTTTGAAGAGCTCTCCCAACGGTTT GAGGATGCCGTCCGCGGCCT
Product: DnaJ domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 643; Mature: 643
Protein sequence:
>643_residues MELPLDHFRLLGVSPVATEELVLRTLSQRLDRPPEGGFTTDALECRAELLRGSADLLCDSERREEYECLLTQLNAEGPDT LPALEVPSSQEVGGLILLMEAGQAAEAFEGARQALQPPQAPALGSNREADLSLLAAISAQKAGQERCRDRRFESAAQILH NGIQLLQRMGQQHEQRVRLESDLNALLPYRILDLISRDLAESGSREFGRDLLDQLVQRRGGLDGDQDPEFPQESFQSFFQ QIRGFLTVQEQIDLFLQWGENGSVTAEFLSAYALTASGFAQRKPERISSALERLQAMRDVGVDAEMACLHLLLGQTDEAA VCFERGSDAALKAWAKEQGSDPLAGLCVYCSDWLKRQVLPCYRDLEADPDLEAYFADRDVQAFIESSDRNRQRAGVSPSA PITSFEVLPTPDPSEIEEILEPLSSSEEDATPVWRLWQEQAQQAAAQLQQWQSELQERLQATTGKQRSIAAASAAGLTAA LIAGVAISQRPSIPAREALLLPEAPLELDSPLAKLNSATPAEETEVLLQLWLDTKATLLDGTASADQLQALASAELVQYA KAGRALDASSGKRRKVNARVQELELSSETPERRVAKATIQYEEKVLSDDGELLGQVEPKQIKNTYVYEKKGDSWQLTDFR PSI
Sequences:
>Translated_643_residues MELPLDHFRLLGVSPVATEELVLRTLSQRLDRPPEGGFTTDALECRAELLRGSADLLCDSERREEYECLLTQLNAEGPDT LPALEVPSSQEVGGLILLMEAGQAAEAFEGARQALQPPQAPALGSNREADLSLLAAISAQKAGQERCRDRRFESAAQILH NGIQLLQRMGQQHEQRVRLESDLNALLPYRILDLISRDLAESGSREFGRDLLDQLVQRRGGLDGDQDPEFPQESFQSFFQ QIRGFLTVQEQIDLFLQWGENGSVTAEFLSAYALTASGFAQRKPERISSALERLQAMRDVGVDAEMACLHLLLGQTDEAA VCFERGSDAALKAWAKEQGSDPLAGLCVYCSDWLKRQVLPCYRDLEADPDLEAYFADRDVQAFIESSDRNRQRAGVSPSA PITSFEVLPTPDPSEIEEILEPLSSSEEDATPVWRLWQEQAQQAAAQLQQWQSELQERLQATTGKQRSIAAASAAGLTAA LIAGVAISQRPSIPAREALLLPEAPLELDSPLAKLNSATPAEETEVLLQLWLDTKATLLDGTASADQLQALASAELVQYA KAGRALDASSGKRRKVNARVQELELSSETPERRVAKATIQYEEKVLSDDGELLGQVEPKQIKNTYVYEKKGDSWQLTDFR PSI >Mature_643_residues MELPLDHFRLLGVSPVATEELVLRTLSQRLDRPPEGGFTTDALECRAELLRGSADLLCDSERREEYECLLTQLNAEGPDT LPALEVPSSQEVGGLILLMEAGQAAEAFEGARQALQPPQAPALGSNREADLSLLAAISAQKAGQERCRDRRFESAAQILH NGIQLLQRMGQQHEQRVRLESDLNALLPYRILDLISRDLAESGSREFGRDLLDQLVQRRGGLDGDQDPEFPQESFQSFFQ QIRGFLTVQEQIDLFLQWGENGSVTAEFLSAYALTASGFAQRKPERISSALERLQAMRDVGVDAEMACLHLLLGQTDEAA VCFERGSDAALKAWAKEQGSDPLAGLCVYCSDWLKRQVLPCYRDLEADPDLEAYFADRDVQAFIESSDRNRQRAGVSPSA PITSFEVLPTPDPSEIEEILEPLSSSEEDATPVWRLWQEQAQQAAAQLQQWQSELQERLQATTGKQRSIAAASAAGLTAA LIAGVAISQRPSIPAREALLLPEAPLELDSPLAKLNSATPAEETEVLLQLWLDTKATLLDGTASADQLQALASAELVQYA KAGRALDASSGKRRKVNARVQELELSSETPERRVAKATIQYEEKVLSDDGELLGQVEPKQIKNTYVYEKKGDSWQLTDFR PSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70847; Mature: 70847
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELPLDHFRLLGVSPVATEELVLRTLSQRLDRPPEGGFTTDALECRAELLRGSADLLCDS CCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHCCC ERREEYECLLTQLNAEGPDTLPALEVPSSQEVGGLILLMEAGQAAEAFEGARQALQPPQA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCC PALGSNREADLSLLAAISAQKAGQERCRDRRFESAAQILHNGIQLLQRMGQQHEQRVRLE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDLNALLPYRILDLISRDLAESGSREFGRDLLDQLVQRRGGLDGDQDPEFPQESFQSFFQ HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH QIRGFLTVQEQIDLFLQWGENGSVTAEFLSAYALTASGFAQRKPERISSALERLQAMRDV HHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC GVDAEMACLHLLLGQTDEAAVCFERGSDAALKAWAKEQGSDPLAGLCVYCSDWLKRQVLP CCCHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH CYRDLEADPDLEAYFADRDVQAFIESSDRNRQRAGVSPSAPITSFEVLPTPDPSEIEEIL HHHCCCCCCCCHHHHCCHHHHHHHHCCCCCHHHCCCCCCCCCCEEEECCCCCHHHHHHHH EPLSSSEEDATPVWRLWQEQAQQAAAQLQQWQSELQERLQATTGKQRSIAAASAAGLTAA HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LIAGVAISQRPSIPAREALLLPEAPLELDSPLAKLNSATPAEETEVLLQLWLDTKATLLD HHHHHHHCCCCCCCHHHEEECCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCHHHHC GTASADQLQALASAELVQYAKAGRALDASSGKRRKVNARVQELELSSETPERRVAKATIQ CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH YEEKVLSDDGELLGQVEPKQIKNTYVYEKKGDSWQLTDFRPSI HHHHHHCCCHHHHCCCCHHHHHCCEEEECCCCCEEECCCCCCC >Mature Secondary Structure MELPLDHFRLLGVSPVATEELVLRTLSQRLDRPPEGGFTTDALECRAELLRGSADLLCDS CCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHCCC ERREEYECLLTQLNAEGPDTLPALEVPSSQEVGGLILLMEAGQAAEAFEGARQALQPPQA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCC PALGSNREADLSLLAAISAQKAGQERCRDRRFESAAQILHNGIQLLQRMGQQHEQRVRLE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDLNALLPYRILDLISRDLAESGSREFGRDLLDQLVQRRGGLDGDQDPEFPQESFQSFFQ HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH QIRGFLTVQEQIDLFLQWGENGSVTAEFLSAYALTASGFAQRKPERISSALERLQAMRDV HHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC GVDAEMACLHLLLGQTDEAAVCFERGSDAALKAWAKEQGSDPLAGLCVYCSDWLKRQVLP CCCHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH CYRDLEADPDLEAYFADRDVQAFIESSDRNRQRAGVSPSAPITSFEVLPTPDPSEIEEIL HHHCCCCCCCCHHHHCCHHHHHHHHCCCCCHHHCCCCCCCCCCEEEECCCCCHHHHHHHH EPLSSSEEDATPVWRLWQEQAQQAAAQLQQWQSELQERLQATTGKQRSIAAASAAGLTAA HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LIAGVAISQRPSIPAREALLLPEAPLELDSPLAKLNSATPAEETEVLLQLWLDTKATLLD HHHHHHHCCCCCCCHHHEEECCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCHHHHC GTASADQLQALASAELVQYAKAGRALDASSGKRRKVNARVQELELSSETPERRVAKATIQ CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH YEEKVLSDDGELLGQVEPKQIKNTYVYEKKGDSWQLTDFRPSI HHHHHHCCCHHHHCCCCHHHHHCCEEEECCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA