Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242806

Identifier: 148242806

GI number: 148242806

Start: 1490969

End: 1492900

Strand: Direct

Name: 148242806

Synonym: SynRCC307_1707

Alternate gene names: NA

Gene position: 1490969-1492900 (Clockwise)

Preceding gene: 148242804

Following gene: 148242807

Centisome position: 67.01

GC content: 64.54

Gene sequence:

>1932_bases
GTGGAACTCCCCCTCGACCATTTCCGACTGTTGGGGGTGAGCCCGGTTGCCACCGAGGAGTTGGTGCTGCGCACCTTGAG
TCAGCGACTGGACCGGCCGCCTGAAGGCGGCTTCACCACAGACGCCCTGGAGTGCCGCGCTGAGCTACTGCGGGGCAGCG
CTGATCTGCTCTGCGACAGCGAGCGCCGTGAGGAATACGAGTGCCTCCTCACCCAGCTCAACGCCGAGGGCCCCGACACG
CTGCCAGCGTTGGAGGTGCCGTCCAGCCAGGAAGTGGGCGGCCTCATCCTCTTAATGGAAGCCGGCCAAGCCGCCGAAGC
CTTTGAAGGGGCCCGCCAGGCGCTGCAACCACCCCAAGCCCCAGCCCTGGGCAGCAACCGCGAAGCCGATCTCTCGCTGC
TGGCGGCCATCTCGGCTCAAAAGGCCGGGCAAGAGCGCTGCCGCGATCGCCGCTTTGAAAGCGCCGCGCAGATCCTGCAC
AACGGCATCCAACTGCTGCAGCGCATGGGCCAGCAGCACGAGCAACGGGTGCGCCTCGAGAGCGACCTCAATGCCCTGCT
GCCCTACCGGATCCTGGATCTGATCAGCCGCGATCTGGCTGAAAGCGGTAGCCGCGAATTTGGCCGCGATCTGCTCGATC
AATTGGTGCAGCGACGCGGCGGCCTCGATGGCGATCAAGATCCGGAGTTCCCGCAGGAATCGTTCCAGTCCTTTTTCCAG
CAGATCCGCGGTTTCCTCACCGTGCAAGAGCAGATCGATCTGTTCCTGCAGTGGGGTGAAAACGGCTCGGTGACCGCCGA
ATTCCTCAGCGCCTATGCCCTGACAGCCTCCGGCTTTGCCCAGCGCAAACCCGAGCGGATCAGCTCGGCCCTCGAGCGGC
TGCAAGCCATGCGCGATGTGGGCGTCGATGCCGAAATGGCCTGCCTGCATCTGCTTCTCGGCCAAACCGATGAAGCAGCG
GTCTGCTTTGAGCGCGGCAGCGATGCGGCCCTCAAGGCCTGGGCCAAAGAACAGGGCAGCGATCCCCTAGCCGGCCTGTG
CGTGTATTGCAGCGACTGGCTCAAGCGCCAAGTTCTGCCTTGCTACCGCGACCTTGAGGCCGACCCCGATCTTGAGGCCT
ATTTCGCCGATCGCGATGTGCAGGCGTTCATCGAAAGCAGCGACCGCAACCGTCAGCGCGCCGGCGTCAGCCCCAGCGCG
CCGATCACCAGCTTTGAAGTGCTGCCCACCCCTGATCCCAGCGAGATCGAAGAGATCCTCGAGCCGCTGAGCAGCAGCGA
AGAAGACGCCACACCCGTCTGGCGCCTGTGGCAAGAGCAGGCCCAACAGGCCGCAGCCCAACTGCAGCAGTGGCAGAGCG
AACTCCAAGAGCGCCTGCAAGCCACCACGGGCAAACAGCGCTCGATTGCAGCGGCCTCCGCCGCCGGCCTCACTGCTGCA
TTGATTGCTGGGGTGGCCATCAGCCAGCGCCCCAGCATTCCGGCCCGCGAAGCCCTGCTGCTGCCAGAAGCCCCCCTGGA
GCTCGATAGCCCCTTGGCAAAGCTCAACAGCGCCACACCAGCGGAGGAAACCGAAGTTCTGCTGCAGCTGTGGCTCGACA
CCAAAGCCACGCTGCTTGATGGCACCGCCTCAGCCGATCAGCTCCAGGCATTGGCGAGCGCCGAACTGGTGCAATACGCC
AAGGCCGGCCGGGCCCTCGATGCCTCCAGCGGCAAGCGCCGCAAGGTGAATGCCCGGGTTCAGGAGCTGGAGCTCAGCAG
CGAAACCCCAGAACGGCGTGTGGCCAAAGCCACGATCCAATACGAGGAGAAGGTGCTCAGCGACGACGGTGAGCTGCTGG
GCCAAGTGGAGCCCAAGCAGATCAAAAACACCTACGTGTACGAGAAAAAAGGCGACAGCTGGCAGCTGACCGACTTCCGC
CCCAGCATCTAG

Upstream 100 bases:

>100_bases
GGCGGCGGCGGTCTCCGTGGTCATCAAACTTGACCCGTTGCAGGAACGGACTTTACCGCTGAAGCCCCTTAAACTCCGCA
CCTGTTTTAAGTAGGTAGCG

Downstream 100 bases:

>100_bases
CGCTGAGCTGATTCCTACGATGGAGGGCTTGTAGCCCTGGATTGGCGGCGCTGATGTTTGAAGAGCTCTCCCAACGGTTT
GAGGATGCCGTCCGCGGCCT

Product: DnaJ domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 643; Mature: 643

Protein sequence:

>643_residues
MELPLDHFRLLGVSPVATEELVLRTLSQRLDRPPEGGFTTDALECRAELLRGSADLLCDSERREEYECLLTQLNAEGPDT
LPALEVPSSQEVGGLILLMEAGQAAEAFEGARQALQPPQAPALGSNREADLSLLAAISAQKAGQERCRDRRFESAAQILH
NGIQLLQRMGQQHEQRVRLESDLNALLPYRILDLISRDLAESGSREFGRDLLDQLVQRRGGLDGDQDPEFPQESFQSFFQ
QIRGFLTVQEQIDLFLQWGENGSVTAEFLSAYALTASGFAQRKPERISSALERLQAMRDVGVDAEMACLHLLLGQTDEAA
VCFERGSDAALKAWAKEQGSDPLAGLCVYCSDWLKRQVLPCYRDLEADPDLEAYFADRDVQAFIESSDRNRQRAGVSPSA
PITSFEVLPTPDPSEIEEILEPLSSSEEDATPVWRLWQEQAQQAAAQLQQWQSELQERLQATTGKQRSIAAASAAGLTAA
LIAGVAISQRPSIPAREALLLPEAPLELDSPLAKLNSATPAEETEVLLQLWLDTKATLLDGTASADQLQALASAELVQYA
KAGRALDASSGKRRKVNARVQELELSSETPERRVAKATIQYEEKVLSDDGELLGQVEPKQIKNTYVYEKKGDSWQLTDFR
PSI

Sequences:

>Translated_643_residues
MELPLDHFRLLGVSPVATEELVLRTLSQRLDRPPEGGFTTDALECRAELLRGSADLLCDSERREEYECLLTQLNAEGPDT
LPALEVPSSQEVGGLILLMEAGQAAEAFEGARQALQPPQAPALGSNREADLSLLAAISAQKAGQERCRDRRFESAAQILH
NGIQLLQRMGQQHEQRVRLESDLNALLPYRILDLISRDLAESGSREFGRDLLDQLVQRRGGLDGDQDPEFPQESFQSFFQ
QIRGFLTVQEQIDLFLQWGENGSVTAEFLSAYALTASGFAQRKPERISSALERLQAMRDVGVDAEMACLHLLLGQTDEAA
VCFERGSDAALKAWAKEQGSDPLAGLCVYCSDWLKRQVLPCYRDLEADPDLEAYFADRDVQAFIESSDRNRQRAGVSPSA
PITSFEVLPTPDPSEIEEILEPLSSSEEDATPVWRLWQEQAQQAAAQLQQWQSELQERLQATTGKQRSIAAASAAGLTAA
LIAGVAISQRPSIPAREALLLPEAPLELDSPLAKLNSATPAEETEVLLQLWLDTKATLLDGTASADQLQALASAELVQYA
KAGRALDASSGKRRKVNARVQELELSSETPERRVAKATIQYEEKVLSDDGELLGQVEPKQIKNTYVYEKKGDSWQLTDFR
PSI
>Mature_643_residues
MELPLDHFRLLGVSPVATEELVLRTLSQRLDRPPEGGFTTDALECRAELLRGSADLLCDSERREEYECLLTQLNAEGPDT
LPALEVPSSQEVGGLILLMEAGQAAEAFEGARQALQPPQAPALGSNREADLSLLAAISAQKAGQERCRDRRFESAAQILH
NGIQLLQRMGQQHEQRVRLESDLNALLPYRILDLISRDLAESGSREFGRDLLDQLVQRRGGLDGDQDPEFPQESFQSFFQ
QIRGFLTVQEQIDLFLQWGENGSVTAEFLSAYALTASGFAQRKPERISSALERLQAMRDVGVDAEMACLHLLLGQTDEAA
VCFERGSDAALKAWAKEQGSDPLAGLCVYCSDWLKRQVLPCYRDLEADPDLEAYFADRDVQAFIESSDRNRQRAGVSPSA
PITSFEVLPTPDPSEIEEILEPLSSSEEDATPVWRLWQEQAQQAAAQLQQWQSELQERLQATTGKQRSIAAASAAGLTAA
LIAGVAISQRPSIPAREALLLPEAPLELDSPLAKLNSATPAEETEVLLQLWLDTKATLLDGTASADQLQALASAELVQYA
KAGRALDASSGKRRKVNARVQELELSSETPERRVAKATIQYEEKVLSDDGELLGQVEPKQIKNTYVYEKKGDSWQLTDFR
PSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70847; Mature: 70847

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELPLDHFRLLGVSPVATEELVLRTLSQRLDRPPEGGFTTDALECRAELLRGSADLLCDS
CCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHCCC
ERREEYECLLTQLNAEGPDTLPALEVPSSQEVGGLILLMEAGQAAEAFEGARQALQPPQA
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCC
PALGSNREADLSLLAAISAQKAGQERCRDRRFESAAQILHNGIQLLQRMGQQHEQRVRLE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SDLNALLPYRILDLISRDLAESGSREFGRDLLDQLVQRRGGLDGDQDPEFPQESFQSFFQ
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
QIRGFLTVQEQIDLFLQWGENGSVTAEFLSAYALTASGFAQRKPERISSALERLQAMRDV
HHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC
GVDAEMACLHLLLGQTDEAAVCFERGSDAALKAWAKEQGSDPLAGLCVYCSDWLKRQVLP
CCCHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
CYRDLEADPDLEAYFADRDVQAFIESSDRNRQRAGVSPSAPITSFEVLPTPDPSEIEEIL
HHHCCCCCCCCHHHHCCHHHHHHHHCCCCCHHHCCCCCCCCCCEEEECCCCCHHHHHHHH
EPLSSSEEDATPVWRLWQEQAQQAAAQLQQWQSELQERLQATTGKQRSIAAASAAGLTAA
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LIAGVAISQRPSIPAREALLLPEAPLELDSPLAKLNSATPAEETEVLLQLWLDTKATLLD
HHHHHHHCCCCCCCHHHEEECCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCHHHHC
GTASADQLQALASAELVQYAKAGRALDASSGKRRKVNARVQELELSSETPERRVAKATIQ
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
YEEKVLSDDGELLGQVEPKQIKNTYVYEKKGDSWQLTDFRPSI
HHHHHHCCCHHHHCCCCHHHHHCCEEEECCCCCEEECCCCCCC
>Mature Secondary Structure
MELPLDHFRLLGVSPVATEELVLRTLSQRLDRPPEGGFTTDALECRAELLRGSADLLCDS
CCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHCCC
ERREEYECLLTQLNAEGPDTLPALEVPSSQEVGGLILLMEAGQAAEAFEGARQALQPPQA
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCC
PALGSNREADLSLLAAISAQKAGQERCRDRRFESAAQILHNGIQLLQRMGQQHEQRVRLE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SDLNALLPYRILDLISRDLAESGSREFGRDLLDQLVQRRGGLDGDQDPEFPQESFQSFFQ
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
QIRGFLTVQEQIDLFLQWGENGSVTAEFLSAYALTASGFAQRKPERISSALERLQAMRDV
HHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC
GVDAEMACLHLLLGQTDEAAVCFERGSDAALKAWAKEQGSDPLAGLCVYCSDWLKRQVLP
CCCHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
CYRDLEADPDLEAYFADRDVQAFIESSDRNRQRAGVSPSAPITSFEVLPTPDPSEIEEIL
HHHCCCCCCCCHHHHCCHHHHHHHHCCCCCHHHCCCCCCCCCCEEEECCCCCHHHHHHHH
EPLSSSEEDATPVWRLWQEQAQQAAAQLQQWQSELQERLQATTGKQRSIAAASAAGLTAA
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LIAGVAISQRPSIPAREALLLPEAPLELDSPLAKLNSATPAEETEVLLQLWLDTKATLLD
HHHHHHHCCCCCCCHHHEEECCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCHHHHC
GTASADQLQALASAELVQYAKAGRALDASSGKRRKVNARVQELELSSETPERRVAKATIQ
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
YEEKVLSDDGELLGQVEPKQIKNTYVYEKKGDSWQLTDFRPSI
HHHHHHCCCHHHHCCCCHHHHHCCEEEECCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA