| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is yjeF [C]
Identifier: 148242802
GI number: 148242802
Start: 1486242
End: 1487786
Strand: Direct
Name: yjeF [C]
Synonym: SynRCC307_1703
Alternate gene names: 148242802
Gene position: 1486242-1487786 (Clockwise)
Preceding gene: 148242800
Following gene: 148242803
Centisome position: 66.8
GC content: 66.34
Gene sequence:
>1545_bases ATGACCTGGCCCGCCCCCGACTCGCAGCATCTACTGCTCAGCAGCCGCGCCATGCAGCAGCTGGAGGAGGCCCTTTTTGC CCAAGGGCTGCCGGTGGCGGCGTTGATGGAGCAGGCCGGCCTGGGATTAGCCCAAGCCGTATTGCAGCACCCAGATCTCA ATCGCCATGGGCTGCTGGTGCTGGTGGGGCCAGGCCACAACGGCGGTGATGGCCTGGTGGTGGCCCGTGAACTGCATCTG CGCGGGATTGCCGTGCGGATCTGGAGCCCGTTTAACGCCCATAAACCACTCACAGCCGAGCACCTGCGCTACGCCCGGTG GCTGGGCATTCCTCAATTGGAGACAGCACCGGATCCCAGCGATCCGGCCCTCTGGCTCGATGCCCTCTTTGGCCTGGGCC AGCGGCGGCCCCTTGGCCCTGAACTCAGCCAGTTGCTGCAAGCGCGCCAGCGCAGCGGTGGCTTGATCTGGAGCATTGAT GGCCCCAGCGGCCTGGATAGCGACAGCGGCCAACCCACCGGCCATGGCACCGCCTGCTGCCAGCGCAGCTTGATCGTTGG GCTGTGGAAGCGGGGCTTCTGGCAAGACAGCGCCATGGCCTGGGTGGGCCAGCAGCAGCGCATTCCCTTGAGCCTTCCCT CTTCTGTATTACCCAGCCTGGGAGAAGAAGCGAGCTTGGGGCTGTGGAGCTCTGATCTGGTCAGCAGCAGTGCCCCTTGG CCGCAGCCGCCTTTGGCCGCCACAAAACATGGCCGGGGCCGGCTGCGGGTGTTTGCCGGCTGCGGCGACTACCTCGGCGC CGCGCGGCTATGCCTCGAAGCGGCCAGCAGCAGCGGCATTGGTTGGCTGGAAGGGGTGGTGCCGCAGCCCTTGGCCCAGC AGCTGTGGCAGGTGCTGCCCCATGTGCTGTTGCCCAACCCAGAGGCTCCCTTGGAGCGCCTTGATGCGGTGGCCTATGGA CCCGGGCTGGGCGGCGGCGCGCTCAACGCTGAGCTGCAGGATTTTCCTGGCTTGCTGCTGCTGGATGCCGATGGGCTCAA CCGCTTGGCCGCCCAAGGGAATGTGCAGCTGTGGTTGCAGCAGCGCACTGGCCCCACCTGGCTGACGCCCCACGCGGCGG AATTCGAGCGGTTGTTCCCGGCGCTGGCCAACTTGCCGCCCGATCAAGCCGCCAGCCAGGCCGCGCAGCAGAGCCAGTGC TGGGTGCTGCGCAAAGGCGCCCGCACCGTGATCGCCTCACCCGATGGAATGGTGCGGCAAGTGCTGCAGAGCGAGGCGCG CGCTGCACGGGCCGGCCTGGGAGATGTGTTGAGCGGTTACGCCGCAGGCCTTGGAGCCATGGGATTAGCCGCAGGGCTGG ATCCAACGGGCGATCGCTTCGATGGGCTGTTAGCCCTAGCCGCGCTGGCCCACGCCAGCGCTGGAATCCGGCAAAGCCAA GCTGGAGAGGGGGCCGCCAGTCCTTTGGCCATCGCTCAAATGCTTCAAAAAGTGCGAGATGCAGGGAGTTTTGAACAAGC TGAAAGCAACCTGATGCGCGACTGA
Upstream 100 bases:
>100_bases CCAGGCCAAGCCTGCAGCCGTTCGATCACGGCGTTCACCGCCGGAGCCGCTTGAGAAGACAGCGTGGTCATTCCCTCATC CTGCCTTCCATCCTGAAGGC
Downstream 100 bases:
>100_bases GTTACATCGAGCACAAAAGTTTTCCACAGCTTCCACAGCCAGGGCCGTTTTTTATCAGGAGCTGACTATCAACAGAGATC ACAATTCGGCATCAACTCTT
Product: fused sugar kinase/uncharacterized domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MTWPAPDSQHLLLSSRAMQQLEEALFAQGLPVAALMEQAGLGLAQAVLQHPDLNRHGLLVLVGPGHNGGDGLVVARELHL RGIAVRIWSPFNAHKPLTAEHLRYARWLGIPQLETAPDPSDPALWLDALFGLGQRRPLGPELSQLLQARQRSGGLIWSID GPSGLDSDSGQPTGHGTACCQRSLIVGLWKRGFWQDSAMAWVGQQQRIPLSLPSSVLPSLGEEASLGLWSSDLVSSSAPW PQPPLAATKHGRGRLRVFAGCGDYLGAARLCLEAASSSGIGWLEGVVPQPLAQQLWQVLPHVLLPNPEAPLERLDAVAYG PGLGGGALNAELQDFPGLLLLDADGLNRLAAQGNVQLWLQQRTGPTWLTPHAAEFERLFPALANLPPDQAASQAAQQSQC WVLRKGARTVIASPDGMVRQVLQSEARAARAGLGDVLSGYAAGLGAMGLAAGLDPTGDRFDGLLALAALAHASAGIRQSQ AGEGAASPLAIAQMLQKVRDAGSFEQAESNLMRD
Sequences:
>Translated_514_residues MTWPAPDSQHLLLSSRAMQQLEEALFAQGLPVAALMEQAGLGLAQAVLQHPDLNRHGLLVLVGPGHNGGDGLVVARELHL RGIAVRIWSPFNAHKPLTAEHLRYARWLGIPQLETAPDPSDPALWLDALFGLGQRRPLGPELSQLLQARQRSGGLIWSID GPSGLDSDSGQPTGHGTACCQRSLIVGLWKRGFWQDSAMAWVGQQQRIPLSLPSSVLPSLGEEASLGLWSSDLVSSSAPW PQPPLAATKHGRGRLRVFAGCGDYLGAARLCLEAASSSGIGWLEGVVPQPLAQQLWQVLPHVLLPNPEAPLERLDAVAYG PGLGGGALNAELQDFPGLLLLDADGLNRLAAQGNVQLWLQQRTGPTWLTPHAAEFERLFPALANLPPDQAASQAAQQSQC WVLRKGARTVIASPDGMVRQVLQSEARAARAGLGDVLSGYAAGLGAMGLAAGLDPTGDRFDGLLALAALAHASAGIRQSQ AGEGAASPLAIAQMLQKVRDAGSFEQAESNLMRD >Mature_513_residues TWPAPDSQHLLLSSRAMQQLEEALFAQGLPVAALMEQAGLGLAQAVLQHPDLNRHGLLVLVGPGHNGGDGLVVARELHLR GIAVRIWSPFNAHKPLTAEHLRYARWLGIPQLETAPDPSDPALWLDALFGLGQRRPLGPELSQLLQARQRSGGLIWSIDG PSGLDSDSGQPTGHGTACCQRSLIVGLWKRGFWQDSAMAWVGQQQRIPLSLPSSVLPSLGEEASLGLWSSDLVSSSAPWP QPPLAATKHGRGRLRVFAGCGDYLGAARLCLEAASSSGIGWLEGVVPQPLAQQLWQVLPHVLLPNPEAPLERLDAVAYGP GLGGGALNAELQDFPGLLLLDADGLNRLAAQGNVQLWLQQRTGPTWLTPHAAEFERLFPALANLPPDQAASQAAQQSQCW VLRKGARTVIASPDGMVRQVLQSEARAARAGLGDVLSGYAAGLGAMGLAAGLDPTGDRFDGLLALAALAHASAGIRQSQA GEGAASPLAIAQMLQKVRDAGSFEQAESNLMRD
Specific function: Unknown
COG id: COG0062
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 YjeF N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI91984773, Length=175, Percent_Identity=33.7142857142857, Blast_Score=71, Evalue=2e-12, Organism=Escherichia coli, GI1790609, Length=440, Percent_Identity=30.6818181818182, Blast_Score=97, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17509719, Length=171, Percent_Identity=34.5029239766082, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI221329809, Length=167, Percent_Identity=34.1317365269461, Blast_Score=80, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017953 - InterPro: IPR000631 - InterPro: IPR004443 [H]
Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]
EC number: NA
Molecular weight: Translated: 54323; Mature: 54191
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWPAPDSQHLLLSSRAMQQLEEALFAQGLPVAALMEQAGLGLAQAVLQHPDLNRHGLLV CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCEEE LVGPGHNGGDGLVVARELHLRGIAVRIWSPFNAHKPLTAEHLRYARWLGIPQLETAPDPS EECCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC DPALWLDALFGLGQRRPLGPELSQLLQARQRSGGLIWSIDGPSGLDSDSGQPTGHGTACC CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHH QRSLIVGLWKRGFWQDSAMAWVGQQQRIPLSLPSSVLPSLGEEASLGLWSSDLVSSSAPW HHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHCCCCCC PQPPLAATKHGRGRLRVFAGCGDYLGAARLCLEAASSSGIGWLEGVVPQPLAQQLWQVLP CCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHH HVLLPNPEAPLERLDAVAYGPGLGGGALNAELQDFPGLLLLDADGLNRLAAQGNVQLWLQ HHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEEECCCCHHHHHHCCCEEEEEE QRTGPTWLTPHAAEFERLFPALANLPPDQAASQAAQQSQCWVLRKGARTVIASPDGMVRQ ECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCEEEECCCHHHHH VLQSEARAARAGLGDVLSGYAAGLGAMGLAAGLDPTGDRFDGLLALAALAHASAGIRQSQ HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHC AGEGAASPLAIAQMLQKVRDAGSFEQAESNLMRD CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCC >Mature Secondary Structure TWPAPDSQHLLLSSRAMQQLEEALFAQGLPVAALMEQAGLGLAQAVLQHPDLNRHGLLV CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCEEE LVGPGHNGGDGLVVARELHLRGIAVRIWSPFNAHKPLTAEHLRYARWLGIPQLETAPDPS EECCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC DPALWLDALFGLGQRRPLGPELSQLLQARQRSGGLIWSIDGPSGLDSDSGQPTGHGTACC CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHH QRSLIVGLWKRGFWQDSAMAWVGQQQRIPLSLPSSVLPSLGEEASLGLWSSDLVSSSAPW HHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHCCCCCC PQPPLAATKHGRGRLRVFAGCGDYLGAARLCLEAASSSGIGWLEGVVPQPLAQQLWQVLP CCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHH HVLLPNPEAPLERLDAVAYGPGLGGGALNAELQDFPGLLLLDADGLNRLAAQGNVQLWLQ HHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEEECCCCHHHHHHCCCEEEEEE QRTGPTWLTPHAAEFERLFPALANLPPDQAASQAAQQSQCWVLRKGARTVIASPDGMVRQ ECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCEEEECCCHHHHH VLQSEARAARAGLGDVLSGYAAGLGAMGLAAGLDPTGDRFDGLLALAALAHASAGIRQSQ HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHC AGEGAASPLAIAQMLQKVRDAGSFEQAESNLMRD CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]