Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242800

Identifier: 148242800

GI number: 148242800

Start: 1484823

End: 1485059

Strand: Direct

Name: 148242800

Synonym: SynRCC307_1701

Alternate gene names: NA

Gene position: 1484823-1485059 (Clockwise)

Preceding gene: 148242798

Following gene: 148242802

Centisome position: 66.74

GC content: 67.09

Gene sequence:

>237_bases
ATGAGCACGGTTCGCTTGCGCTGGCCCGATGGCCGCAGCAGCAGCGCTGCTGCTGGTTGCAGCTGGCTGGAGGCGGCTCA
AGCAGCGGGGGTGAGCATCCCCACCGGCTGCCTGGGCGGCAGTTGCGGCGCCTGTGAAATCGAAGTCAATGGCGAGCTGG
TGCGCGCCTGCATCAGCAGCGTGCCCAAGAGCACCGAGCTGCTGCAGGTGGAACTGGCCAGCGACCCTTACTGGTGA

Upstream 100 bases:

>100_bases
TGTACGAAACCATGCCCAAGGGGGTATGGATGGTGCCGGTGCAGACCCAATAGCCCTTGGCCATGATTTTGCAAATGCGC
CCGCTGATTCAACTGCATTC

Downstream 100 bases:

>100_bases
CTCAGGCCTGAATCAAGCCGCCACCGAGGCACACCTCACCGTCATAAAAGACAGCTGCTTGACCTGGGGTGATCGAGAAC
TGCTCTTCAGCAAAGTCCAA

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 77

Protein sequence:

>78_residues
MSTVRLRWPDGRSSSAAAGCSWLEAAQAAGVSIPTGCLGGSCGACEIEVNGELVRACISSVPKSTELLQVELASDPYW

Sequences:

>Translated_78_residues
MSTVRLRWPDGRSSSAAAGCSWLEAAQAAGVSIPTGCLGGSCGACEIEVNGELVRACISSVPKSTELLQVELASDPYW
>Mature_77_residues
STVRLRWPDGRSSSAAAGCSWLEAAQAAGVSIPTGCLGGSCGACEIEVNGELVRACISSVPKSTELLQVELASDPYW

Specific function: Unknown

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8058; Mature: 7927

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
6.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTVRLRWPDGRSSSAAAGCSWLEAAQAAGVSIPTGCLGGSCGACEIEVNGELVRACISS
CCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHH
VPKSTELLQVELASDPYW
CCCCCCEEEEEECCCCCC
>Mature Secondary Structure 
STVRLRWPDGRSSSAAAGCSWLEAAQAAGVSIPTGCLGGSCGACEIEVNGELVRACISS
CEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHH
VPKSTELLQVELASDPYW
CCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA