| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242800
Identifier: 148242800
GI number: 148242800
Start: 1484823
End: 1485059
Strand: Direct
Name: 148242800
Synonym: SynRCC307_1701
Alternate gene names: NA
Gene position: 1484823-1485059 (Clockwise)
Preceding gene: 148242798
Following gene: 148242802
Centisome position: 66.74
GC content: 67.09
Gene sequence:
>237_bases ATGAGCACGGTTCGCTTGCGCTGGCCCGATGGCCGCAGCAGCAGCGCTGCTGCTGGTTGCAGCTGGCTGGAGGCGGCTCA AGCAGCGGGGGTGAGCATCCCCACCGGCTGCCTGGGCGGCAGTTGCGGCGCCTGTGAAATCGAAGTCAATGGCGAGCTGG TGCGCGCCTGCATCAGCAGCGTGCCCAAGAGCACCGAGCTGCTGCAGGTGGAACTGGCCAGCGACCCTTACTGGTGA
Upstream 100 bases:
>100_bases TGTACGAAACCATGCCCAAGGGGGTATGGATGGTGCCGGTGCAGACCCAATAGCCCTTGGCCATGATTTTGCAAATGCGC CCGCTGATTCAACTGCATTC
Downstream 100 bases:
>100_bases CTCAGGCCTGAATCAAGCCGCCACCGAGGCACACCTCACCGTCATAAAAGACAGCTGCTTGACCTGGGGTGATCGAGAAC TGCTCTTCAGCAAAGTCCAA
Product: ferredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MSTVRLRWPDGRSSSAAAGCSWLEAAQAAGVSIPTGCLGGSCGACEIEVNGELVRACISSVPKSTELLQVELASDPYW
Sequences:
>Translated_78_residues MSTVRLRWPDGRSSSAAAGCSWLEAAQAAGVSIPTGCLGGSCGACEIEVNGELVRACISSVPKSTELLQVELASDPYW >Mature_77_residues STVRLRWPDGRSSSAAAGCSWLEAAQAAGVSIPTGCLGGSCGACEIEVNGELVRACISSVPKSTELLQVELASDPYW
Specific function: Unknown
COG id: COG0633
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8058; Mature: 7927
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 6.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVRLRWPDGRSSSAAAGCSWLEAAQAAGVSIPTGCLGGSCGACEIEVNGELVRACISS CCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHH VPKSTELLQVELASDPYW CCCCCCEEEEEECCCCCC >Mature Secondary Structure STVRLRWPDGRSSSAAAGCSWLEAAQAAGVSIPTGCLGGSCGACEIEVNGELVRACISS CEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHH VPKSTELLQVELASDPYW CCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA