Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242797

Identifier: 148242797

GI number: 148242797

Start: 1482669

End: 1483025

Strand: Direct

Name: 148242797

Synonym: SynRCC307_1698

Alternate gene names: NA

Gene position: 1482669-1483025 (Clockwise)

Preceding gene: 148242795

Following gene: 148242798

Centisome position: 66.64

GC content: 66.39

Gene sequence:

>357_bases
ATGCTGACTTGCGATCCCCATTCCTTGGCACGCGCAGCTGAGGCCCTGCCCTGCTTGCCGCTACAGCCGAGTTTCTACGC
CGCGGTGTTGCAGCAACCCCTCAGCAGCGAGGAGGTGAGCCGCAATGAGGCTTGGTGCTGCCGGCCGCTCAGTGCCAATG
CCACCGAAAACTGCTTCATCTGGCTGATTCGCTTGGGGGTGCTGCGGCGTGAAGTGGATGGCCAAGGGCTGACTTCGCGG
GTGAGGCTCACCCCCATGGGCAACCAACTGCTCAAGCGCTGGCCGCAAGGCTGGCCGCCCGCAAGCCCCTGGCAGCGGCT
GCGCCATGGCATCCGCCGGCGCTGGCCACGGCTGTGA

Upstream 100 bases:

>100_bases
CACGCGGTGGGGAATGGCCGCTAACTCGAGCAGGCGCCGGCGCGCCGGTGACGCCGAAGCCAACAGCAACGTCATGGCCT
CTGGTTCCTAGGGTTCCCCC

Downstream 100 bases:

>100_bases
CGCCGCCCACCCCCTTGATGGTGCTGGGCACGAGCAGTGGTGCCGGCAAATCCCTGATGACAGCGGCGCTCTGCCGAGTG
CTCAAACGCCGCGGCGAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MLTCDPHSLARAAEALPCLPLQPSFYAAVLQQPLSSEEVSRNEAWCCRPLSANATENCFIWLIRLGVLRREVDGQGLTSR
VRLTPMGNQLLKRWPQGWPPASPWQRLRHGIRRRWPRL

Sequences:

>Translated_118_residues
MLTCDPHSLARAAEALPCLPLQPSFYAAVLQQPLSSEEVSRNEAWCCRPLSANATENCFIWLIRLGVLRREVDGQGLTSR
VRLTPMGNQLLKRWPQGWPPASPWQRLRHGIRRRWPRL
>Mature_118_residues
MLTCDPHSLARAAEALPCLPLQPSFYAAVLQQPLSSEEVSRNEAWCCRPLSANATENCFIWLIRLGVLRREVDGQGLTSR
VRLTPMGNQLLKRWPQGWPPASPWQRLRHGIRRRWPRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13553; Mature: 13553

Theoretical pI: Translated: 11.03; Mature: 11.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTCDPHSLARAAEALPCLPLQPSFYAAVLQQPLSSEEVSRNEAWCCRPLSANATENCFI
CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHCCCCCEEECCCCCCCCCHHHH
WLIRLGVLRREVDGQGLTSRVRLTPMGNQLLKRWPQGWPPASPWQRLRHGIRRRWPRL
HHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLTCDPHSLARAAEALPCLPLQPSFYAAVLQQPLSSEEVSRNEAWCCRPLSANATENCFI
CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHCCCCCEEECCCCCCCCCHHHH
WLIRLGVLRREVDGQGLTSRVRLTPMGNQLLKRWPQGWPPASPWQRLRHGIRRRWPRL
HHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA