| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is psaK [H]
Identifier: 148242487
GI number: 148242487
Start: 1235437
End: 1235712
Strand: Direct
Name: psaK [H]
Synonym: SynRCC307_1388
Alternate gene names: 148242487
Gene position: 1235437-1235712 (Clockwise)
Preceding gene: 148242486
Following gene: 148242490
Centisome position: 55.53
GC content: 62.32
Gene sequence:
>276_bases ATGACCCTGTTTCCCGCATTGGTGTCTCCTCTGCTCGCCTTGGCTCCCGCCACCGTGGCTTGGAGCCCCAAGGTTGGTTT GGTGATGATCCTCTGCAACGTCATGGCCATTGCCATCGGCAAAGCCACCATCAAGTACCCCAATGAGGGCGGTGCTCTGC CCAACAGCTCCTTCTTCGGCGGCATGGGCATGGGCGCGCTGCTCGGCACCACCAGCCTGGGTCACGTGATCGGCATCGCC AGCATCCAAGGCTTGGCTGCCAGCGGCGTTCTCTGA
Upstream 100 bases:
>100_bases GCGGTGAACAACTCTTACGAGCTGACACAAAAGCCAACAGTTCAAAGGATGATTCCGGGGACATCCCGTTTGACCCGTCT GCCTGCAGGCGCCTCTCCCC
Downstream 100 bases:
>100_bases AGAGCGGGTCCTTAGCGCCCTAGCCCCAGCACGTAGGGCAGGGCGCGCCAACCAAAGCGTTCGAAGCGATAGTCAAACAG CAGCGCGGAGAGCTCAACCG
Product: photosystem I reaction center subunit X
Products: NA
Alternate protein names: Photosystem I subunit X [H]
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MTLFPALVSPLLALAPATVAWSPKVGLVMILCNVMAIAIGKATIKYPNEGGALPNSSFFGGMGMGALLGTTSLGHVIGIA SIQGLAASGVL
Sequences:
>Translated_91_residues MTLFPALVSPLLALAPATVAWSPKVGLVMILCNVMAIAIGKATIKYPNEGGALPNSSFFGGMGMGALLGTTSLGHVIGIA SIQGLAASGVL >Mature_90_residues TLFPALVSPLLALAPATVAWSPKVGLVMILCNVMAIAIGKATIKYPNEGGALPNSSFFGGMGMGALLGTTSLGHVIGIAS IQGLAASGVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the psaG/psaK family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000549 - InterPro: IPR017492 [H]
Pfam domain/function: PF01241 PSI_PSAK [H]
EC number: NA
Molecular weight: Translated: 9010; Mature: 8879
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: PS01026 PHOTOSYSTEM_I_PSAGK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLFPALVSPLLALAPATVAWSPKVGLVMILCNVMAIAIGKATIKYPNEGGALPNSSFFG CCCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCC GMGMGALLGTTSLGHVIGIASIQGLAASGVL CCCHHHHHHHCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TLFPALVSPLLALAPATVAWSPKVGLVMILCNVMAIAIGKATIKYPNEGGALPNSSFFG CCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCC GMGMGALLGTTSLGHVIGIASIQGLAASGVL CCCHHHHHHHCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12917641 [H]