| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
Click here to switch to the map view.
The map label for this gene is 148242486
Identifier: 148242486
GI number: 148242486
Start: 1235075
End: 1235440
Strand: Direct
Name: 148242486
Synonym: SynRCC307_1387
Alternate gene names: NA
Gene position: 1235075-1235440 (Clockwise)
Preceding gene: 148242485
Following gene: 148242487
Centisome position: 55.51
GC content: 59.84
Gene sequence:
>366_bases ATGAACGATCCTGCCGCCCCACTGTTTGCCCTCTCGCTGCTGCCCTATCTGCTGTTTCTGTGGTGGGCTTGGCGGAGTCA GCGCTTTCCGCGGCTGGCTTTGCTGGGCTTTGCCCTCACCCTGCTGTTTGTGGTGATCACCATCGCCGCCGCCTTGGTGG CCCAGCTGCGCTACGACGCCGAGCTGGCCAATGTGGACTGGCTCCATGGCGGGGCGGAAGCCTTTTTGAGCCTTAGCAAT CTGATCTTGCTGCTGGGTTTTGGCGGTGAACAACTCTTACGAGCTGACACAAAAGCCAACAGTTCAAAGGATGATTCCGG GGACATCCCGTTTGACCCGTCTGCCTGCAGGCGCCTCTCCCCATGA
Upstream 100 bases:
>100_bases ACTGGCTGGTCACCGTGCAAGCCGCACTAACCCTGGTGGGCAATAGCGCTCTAGCCATGGCGGCTTGGTGGATTTGGCGC CGTCAACGCCAGGAGGCCGC
Downstream 100 bases:
>100_bases CCCTGTTTCCCGCATTGGTGTCTCCTCTGCTCGCCTTGGCTCCCGCCACCGTGGCTTGGAGCCCCAAGGTTGGTTTGGTG ATGATCCTCTGCAACGTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MNDPAAPLFALSLLPYLLFLWWAWRSQRFPRLALLGFALTLLFVVITIAAALVAQLRYDAELANVDWLHGGAEAFLSLSN LILLLGFGGEQLLRADTKANSSKDDSGDIPFDPSACRRLSP
Sequences:
>Translated_121_residues MNDPAAPLFALSLLPYLLFLWWAWRSQRFPRLALLGFALTLLFVVITIAAALVAQLRYDAELANVDWLHGGAEAFLSLSN LILLLGFGGEQLLRADTKANSSKDDSGDIPFDPSACRRLSP >Mature_121_residues MNDPAAPLFALSLLPYLLFLWWAWRSQRFPRLALLGFALTLLFVVITIAAALVAQLRYDAELANVDWLHGGAEAFLSLSN LILLLGFGGEQLLRADTKANSSKDDSGDIPFDPSACRRLSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13303; Mature: 13303
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDPAAPLFALSLLPYLLFLWWAWRSQRFPRLALLGFALTLLFVVITIAAALVAQLRYDA CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ELANVDWLHGGAEAFLSLSNLILLLGFGGEQLLRADTKANSSKDDSGDIPFDPSACRRLS HHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCC P C >Mature Secondary Structure MNDPAAPLFALSLLPYLLFLWWAWRSQRFPRLALLGFALTLLFVVITIAAALVAQLRYDA CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ELANVDWLHGGAEAFLSLSNLILLLGFGGEQLLRADTKANSSKDDSGDIPFDPSACRRLS HHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCC P C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA