| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is ilvA [H]
Identifier: 148242490
GI number: 148242490
Start: 1238882
End: 1240456
Strand: Direct
Name: ilvA [H]
Synonym: SynRCC307_1391
Alternate gene names: 148242490
Gene position: 1238882-1240456 (Clockwise)
Preceding gene: 148242487
Following gene: 148242491
Centisome position: 55.68
GC content: 62.67
Gene sequence:
>1575_bases ATGGCATCAACGGCAGCAAACCGGGAGGATGGAGGCAATCAAGACCAGGTCATGGAGGGTTACCTGCAGCGGATCCTGCG CGCCAGGGTCTATGAGGTGGCCCGCGAAACGCCACTGGAGCCAGCCACGCGCCTATCGCAGCGGCTGGGCCATTCGGTGC TGCTCAAACGCGAAGACCTGCAACCGGTTTTCTCCTTCAAGCTGCGGGGCGCCTTCAACAAGATGGTGCAGCTGCCCGCC GAACAGCTGCAGCGCGGGGTCATTGCAGCCAGTGCCGGCAACCATGCCCAGGGCGTGGCCTTGGCCGCCGAGCGCCTGGG CTGCTCGGCGGTGATCGTGATGCCGGTGACAACGCCGCGCACCAAGGTTGAAGCGGTGCGTAGCCGCGGAGCTGAAGTGG TGCTCCATGGCGACAGCTTTGACGCCGCCCAGGCCCAGGCCCGAATCCTGGAGCAGGAGCGGGGGCTGTGTTTTATCCAT CCCTTCGATGACCCCGAAGTCATCGCTGGGCAAGGAACCATTGGCATGGAAATCCTGCGCCAATGCAATGAACCACCGGC GGCGATCTACCTGGCCGTGGGGGGAGGGGGGCTGATTGCTGGGGTTGGCGCCTACGTCAAAGCCCTCTGGCCAAATGTTC AGATCATTGGCGTCGAACCGCAGGATGCCGATGCCATGACCCGCTCGCTCGCAGCCGGCGAGCGCCAAAGGCTCGAGCAG GTTGGGCTGTTTGCCGATGGCGTGGCTGTGCGGGAAGTGGGGGAAGAAACCTTTCGCGTGGCGCAACAGGTGGTGGACCG GATGGTGACGGTCGATAGCGATGCCATCTGCGCCGCCATCAAAGACGTCTTTGAAGACACCCGCTCAATCCTTGAACCGG CTGGAGCCCTTGCTGTGGCTGGCTTGAAAGCCGACGCGGCCCGTTGGCCCCCGGGCAGCGCCTTGGTGGCGGTGGCCTGC GGCGCCAACATGAATTTCGAGCGGCTGCGCTTTGTGGCCGAACGGGCGGAATTGGGCGAGCAACGCGAAGCGATGCTGGC CGTGGAAATTCCTGAGCAGCCCGGCAGCCTGCGGCAGTTCTGCCGTTTGCTTGGCAGTCACAGCCTGACGGAATTCAGTT ATCGCCAGGCCCGCGGGCACCGGGCACAAATCTTCGTGGGGGTGGAGACCAGCAACCGCCAAGACGCCATGGCATTAATG GCCTTGCTGGAAGAGGGGGGATTCTCCTGCGTGGATCTCTCCAGCAATGAATTGGCCAAATTGCACCTGCGCCACATGGT GGGCGGGCGGCTACCAGAAGCAGCACCAGGGCAAGACCCAGTCCCTGAAAGGCTCTATCGCTTCGAATTCCCCGAACGCC CCGGTGCCCTGATGGCGTTTGTGGAAGCCCTTCACCCGGGCTGGACCATCAGCATTTTTCATTACCGAAACCAGGGCTCT GATGTGGGCCGAATCGTTGTGGGAGTCCAAGTTCCAGCTGAGGAGTTGGAGCAATGGCAGCAGGTTTTGGCTGGGCTGCC CTTCCAAAGCTGGGAGGAGACCAATAACCCCGCCTATCAGCTTTTCCTGGCCTGA
Upstream 100 bases:
>100_bases CTGCTCAGACCATGCAATTCATTGGGATGACTCAGCTCGCTGAGATGCATTCGGCTGACGTCCCGTAAGCGACAAATCTA CAACCCCTTCCCAACGGTTG
Downstream 100 bases:
>100_bases GGCAAAAACGACCGCTACGTTGCGCCAATGGTCTCAACCGAGCTCTCTCTTCCGGCCCAACTCGAGGCGATCCTCTACCT CAAGGGGCGCTGCCTGAGCC
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 524; Mature: 523
Protein sequence:
>524_residues MASTAANREDGGNQDQVMEGYLQRILRARVYEVARETPLEPATRLSQRLGHSVLLKREDLQPVFSFKLRGAFNKMVQLPA EQLQRGVIAASAGNHAQGVALAAERLGCSAVIVMPVTTPRTKVEAVRSRGAEVVLHGDSFDAAQAQARILEQERGLCFIH PFDDPEVIAGQGTIGMEILRQCNEPPAAIYLAVGGGGLIAGVGAYVKALWPNVQIIGVEPQDADAMTRSLAAGERQRLEQ VGLFADGVAVREVGEETFRVAQQVVDRMVTVDSDAICAAIKDVFEDTRSILEPAGALAVAGLKADAARWPPGSALVAVAC GANMNFERLRFVAERAELGEQREAMLAVEIPEQPGSLRQFCRLLGSHSLTEFSYRQARGHRAQIFVGVETSNRQDAMALM ALLEEGGFSCVDLSSNELAKLHLRHMVGGRLPEAAPGQDPVPERLYRFEFPERPGALMAFVEALHPGWTISIFHYRNQGS DVGRIVVGVQVPAEELEQWQQVLAGLPFQSWEETNNPAYQLFLA
Sequences:
>Translated_524_residues MASTAANREDGGNQDQVMEGYLQRILRARVYEVARETPLEPATRLSQRLGHSVLLKREDLQPVFSFKLRGAFNKMVQLPA EQLQRGVIAASAGNHAQGVALAAERLGCSAVIVMPVTTPRTKVEAVRSRGAEVVLHGDSFDAAQAQARILEQERGLCFIH PFDDPEVIAGQGTIGMEILRQCNEPPAAIYLAVGGGGLIAGVGAYVKALWPNVQIIGVEPQDADAMTRSLAAGERQRLEQ VGLFADGVAVREVGEETFRVAQQVVDRMVTVDSDAICAAIKDVFEDTRSILEPAGALAVAGLKADAARWPPGSALVAVAC GANMNFERLRFVAERAELGEQREAMLAVEIPEQPGSLRQFCRLLGSHSLTEFSYRQARGHRAQIFVGVETSNRQDAMALM ALLEEGGFSCVDLSSNELAKLHLRHMVGGRLPEAAPGQDPVPERLYRFEFPERPGALMAFVEALHPGWTISIFHYRNQGS DVGRIVVGVQVPAEELEQWQQVLAGLPFQSWEETNNPAYQLFLA >Mature_523_residues ASTAANREDGGNQDQVMEGYLQRILRARVYEVARETPLEPATRLSQRLGHSVLLKREDLQPVFSFKLRGAFNKMVQLPAE QLQRGVIAASAGNHAQGVALAAERLGCSAVIVMPVTTPRTKVEAVRSRGAEVVLHGDSFDAAQAQARILEQERGLCFIHP FDDPEVIAGQGTIGMEILRQCNEPPAAIYLAVGGGGLIAGVGAYVKALWPNVQIIGVEPQDADAMTRSLAAGERQRLEQV GLFADGVAVREVGEETFRVAQQVVDRMVTVDSDAICAAIKDVFEDTRSILEPAGALAVAGLKADAARWPPGSALVAVACG ANMNFERLRFVAERAELGEQREAMLAVEIPEQPGSLRQFCRLLGSHSLTEFSYRQARGHRAQIFVGVETSNRQDAMALMA LLEEGGFSCVDLSSNELAKLHLRHMVGGRLPEAAPGQDPVPERLYRFEFPERPGALMAFVEALHPGWTISIFHYRNQGSD VGRIVVGVQVPAEELEQWQQVLAGLPFQSWEETNNPAYQLFLA
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=273, Percent_Identity=35.8974358974359, Blast_Score=146, Evalue=5e-35, Organism=Homo sapiens, GI33469958, Length=312, Percent_Identity=32.3717948717949, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI19923959, Length=314, Percent_Identity=32.1656050955414, Blast_Score=99, Evalue=1e-20, Organism=Escherichia coli, GI1790207, Length=506, Percent_Identity=51.1857707509881, Blast_Score=473, Evalue=1e-135, Organism=Escherichia coli, GI1789505, Length=262, Percent_Identity=40.0763358778626, Blast_Score=167, Evalue=1e-42, Organism=Caenorhabditis elegans, GI71991565, Length=329, Percent_Identity=34.0425531914894, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI17537387, Length=324, Percent_Identity=33.9506172839506, Blast_Score=141, Evalue=7e-34, Organism=Caenorhabditis elegans, GI17508781, Length=280, Percent_Identity=30, Blast_Score=128, Evalue=6e-30, Organism=Caenorhabditis elegans, GI17535051, Length=272, Percent_Identity=25, Blast_Score=67, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6320930, Length=522, Percent_Identity=48.6590038314176, Blast_Score=462, Evalue=1e-131, Organism=Saccharomyces cerevisiae, GI6322631, Length=302, Percent_Identity=33.4437086092715, Blast_Score=150, Evalue=3e-37, Organism=Saccharomyces cerevisiae, GI6319788, Length=300, Percent_Identity=28, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI21355833, Length=328, Percent_Identity=34.1463414634146, Blast_Score=164, Evalue=1e-40, Organism=Drosophila melanogaster, GI24645328, Length=251, Percent_Identity=32.6693227091633, Blast_Score=118, Evalue=1e-26,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005787 - InterPro: IPR001721 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 57032; Mature: 56901
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTAANREDGGNQDQVMEGYLQRILRARVYEVARETPLEPATRLSQRLGHSVLLKREDL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHEEEEHHCC QPVFSFKLRGAFNKMVQLPAEQLQRGVIAASAGNHAQGVALAAERLGCSAVIVMPVTTPR CHHHHHHHHHHHHHHHHCCHHHHHCCEEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCH TKVEAVRSRGAEVVLHGDSFDAAQAQARILEQERGLCFIHPFDDPEVIAGQGTIGMEILR HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCEEEEECCCCCCEEECCCCHHHHHHH QCNEPPAAIYLAVGGGGLIAGVGAYVKALWPNVQIIGVEPQDADAMTRSLAAGERQRLEQ HCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH VGLFADGVAVREVGEETFRVAQQVVDRMVTVDSDAICAAIKDVFEDTRSILEPAGALAVA HCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHEEE GLKADAARWPPGSALVAVACGANMNFERLRFVAERAELGEQREAMLAVEIPEQPGSLRQF CCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHH CRLLGSHSLTEFSYRQARGHRAQIFVGVETSNRQDAMALMALLEEGGFSCVDLSSNELAK HHHHCCCCCHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCEEEECCCCHHHH LHLRHMVGGRLPEAAPGQDPVPERLYRFEFPERPGALMAFVEALHPGWTISIFHYRNQGS HHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCC DVGRIVVGVQVPAEELEQWQQVLAGLPFQSWEETNNPAYQLFLA CCCEEEEEEECCHHHHHHHHHHHHCCCCCCHHCCCCCEEEEEEC >Mature Secondary Structure ASTAANREDGGNQDQVMEGYLQRILRARVYEVARETPLEPATRLSQRLGHSVLLKREDL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHEEEEHHCC QPVFSFKLRGAFNKMVQLPAEQLQRGVIAASAGNHAQGVALAAERLGCSAVIVMPVTTPR CHHHHHHHHHHHHHHHHCCHHHHHCCEEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCH TKVEAVRSRGAEVVLHGDSFDAAQAQARILEQERGLCFIHPFDDPEVIAGQGTIGMEILR HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCEEEEECCCCCCEEECCCCHHHHHHH QCNEPPAAIYLAVGGGGLIAGVGAYVKALWPNVQIIGVEPQDADAMTRSLAAGERQRLEQ HCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH VGLFADGVAVREVGEETFRVAQQVVDRMVTVDSDAICAAIKDVFEDTRSILEPAGALAVA HCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHEEE GLKADAARWPPGSALVAVACGANMNFERLRFVAERAELGEQREAMLAVEIPEQPGSLRQF CCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHH CRLLGSHSLTEFSYRQARGHRAQIFVGVETSNRQDAMALMALLEEGGFSCVDLSSNELAK HHHHCCCCCHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCEEEECCCCHHHH LHLRHMVGGRLPEAAPGQDPVPERLYRFEFPERPGALMAFVEALHPGWTISIFHYRNQGS HHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCC DVGRIVVGVQVPAEELEQWQQVLAGLPFQSWEETNNPAYQLFLA CCCEEEEEEECCHHHHHHHHHHHHCCCCCCHHCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA