| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is suhB [H]
Identifier: 148242467
GI number: 148242467
Start: 1214220
End: 1215059
Strand: Direct
Name: suhB [H]
Synonym: SynRCC307_1368
Alternate gene names: 148242467
Gene position: 1214220-1215059 (Clockwise)
Preceding gene: 148242466
Following gene: 148242468
Centisome position: 54.57
GC content: 64.4
Gene sequence:
>840_bases ATGAGCCCAAGCGATCAAGAGCTGCTGGCGATTGCCAGCGCGGCGGCCGATGCCGGCGCTGCCGAGTTGAGCCACTACTG GGGCAATCTGAGCCAGGTGCGCAGCAAAGGGCGCGCCGGTGATTTGGTCACTGAAGCCGATCTGGCCGCCGAAGCCGCTG TGCTGCGACTGCTTCAAGAGCGCACACCTGAAGTGGCGGTGTTAGCCGAAGAAAGCGGGCATCAACCCGGAAGCGACCGC GAGCTGCAGTGGTGCGTGGATCCACTCGATGGCACCACCAATTACGCCCATGGTTTTCCCTTCTTTGCCTGCTCCATCGG CCTGCTGCGCCATGGCAAGCCACTGCTGGGGGCCATTGCCGCTCCTGGCCTCAATCAGCGCTACAGCGGTGGGCTCGGCC TCGGCGCCTGGTGCAATGGGGATCCACTGCAGGTGTCGAGCTGCCAATCCTTGGCGGATTCCCTCCTGGTGACGGGATTT GCCTACGACCGGCGCGAGCGAATCGACAACAACTACAGCGAGTTCTGTTATTTCTCCCACCGCACCCATGGCGTGCGGCG CGGTGGTGCGGCAGCACTGGATTTGGCCCTTGTGGCCGCCGGCAGGCTGGATGGTTATTGGGAACGGGGCCTGCAGCCCT GGGATTTAGCGGCCGGGGTGGCCTTGGTTCAAGCCGCCGGTGGTCTGGTCTGTGACTACGACGGCAGTGCGCTTGAGCTC TCCAGTGGCCGGGTGGTGGCCACCAATGCCGCCTTGCAGGGCCCGCTGTTGCAGGGCCTATCCGAATGCCAACCGCTGCC GCCTGCGACCTACAACGCTGAGATCCCCGCTGGTCCATAG
Upstream 100 bases:
>100_bases TGACGGTGGAAACCCAGGACGAAGACGAGGTCTACATGCTGCAGTTCGGCAATGCCTTTGGAAAAGGCACCGTGCGCGCT GCTATTCCGCTGGAAGAAGA
Downstream 100 bases:
>100_bases GATTCGGCGGCAACCGTGCCGATCGGATGGCCCTTCAGCCCGCCAGTGGAGCCCGCGACCTCCTGCCCCGCGACGTGGGG GTTAACCGCTGGATTGCCGA
Product: inositol-1-monophosphatase
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MSPSDQELLAIASAAADAGAAELSHYWGNLSQVRSKGRAGDLVTEADLAAEAAVLRLLQERTPEVAVLAEESGHQPGSDR ELQWCVDPLDGTTNYAHGFPFFACSIGLLRHGKPLLGAIAAPGLNQRYSGGLGLGAWCNGDPLQVSSCQSLADSLLVTGF AYDRRERIDNNYSEFCYFSHRTHGVRRGGAAALDLALVAAGRLDGYWERGLQPWDLAAGVALVQAAGGLVCDYDGSALEL SSGRVVATNAALQGPLLQGLSECQPLPPATYNAEIPAGP
Sequences:
>Translated_279_residues MSPSDQELLAIASAAADAGAAELSHYWGNLSQVRSKGRAGDLVTEADLAAEAAVLRLLQERTPEVAVLAEESGHQPGSDR ELQWCVDPLDGTTNYAHGFPFFACSIGLLRHGKPLLGAIAAPGLNQRYSGGLGLGAWCNGDPLQVSSCQSLADSLLVTGF AYDRRERIDNNYSEFCYFSHRTHGVRRGGAAALDLALVAAGRLDGYWERGLQPWDLAAGVALVQAAGGLVCDYDGSALEL SSGRVVATNAALQGPLLQGLSECQPLPPATYNAEIPAGP >Mature_278_residues SPSDQELLAIASAAADAGAAELSHYWGNLSQVRSKGRAGDLVTEADLAAEAAVLRLLQERTPEVAVLAEESGHQPGSDRE LQWCVDPLDGTTNYAHGFPFFACSIGLLRHGKPLLGAIAAPGLNQRYSGGLGLGAWCNGDPLQVSSCQSLADSLLVTGFA YDRRERIDNNYSEFCYFSHRTHGVRRGGAAALDLALVAAGRLDGYWERGLQPWDLAAGVALVQAAGGLVCDYDGSALELS SGRVVATNAALQGPLLQGLSECQPLPPATYNAEIPAGP
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI5031789, Length=270, Percent_Identity=33.3333333333333, Blast_Score=143, Evalue=2e-34, Organism=Homo sapiens, GI221625487, Length=270, Percent_Identity=33.3333333333333, Blast_Score=142, Evalue=3e-34, Organism=Homo sapiens, GI7657236, Length=232, Percent_Identity=35.7758620689655, Blast_Score=128, Evalue=6e-30, Organism=Homo sapiens, GI221625507, Length=144, Percent_Identity=33.3333333333333, Blast_Score=82, Evalue=7e-16, Organism=Escherichia coli, GI1788882, Length=228, Percent_Identity=36.8421052631579, Blast_Score=164, Evalue=5e-42, Organism=Escherichia coli, GI1790659, Length=129, Percent_Identity=35.6589147286822, Blast_Score=71, Evalue=6e-14, Organism=Caenorhabditis elegans, GI193202572, Length=239, Percent_Identity=33.8912133891213, Blast_Score=129, Evalue=1e-30, Organism=Caenorhabditis elegans, GI193202570, Length=242, Percent_Identity=32.6446280991736, Blast_Score=119, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6320493, Length=219, Percent_Identity=32.4200913242009, Blast_Score=114, Evalue=2e-26, Organism=Drosophila melanogaster, GI21357329, Length=234, Percent_Identity=33.3333333333333, Blast_Score=130, Evalue=1e-30, Organism=Drosophila melanogaster, GI21357303, Length=236, Percent_Identity=30.5084745762712, Blast_Score=123, Evalue=2e-28, Organism=Drosophila melanogaster, GI24664918, Length=202, Percent_Identity=34.6534653465347, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI24664926, Length=215, Percent_Identity=32.5581395348837, Blast_Score=115, Evalue=3e-26, Organism=Drosophila melanogaster, GI24664922, Length=220, Percent_Identity=30.9090909090909, Blast_Score=114, Evalue=7e-26, Organism=Drosophila melanogaster, GI21357957, Length=228, Percent_Identity=32.0175438596491, Blast_Score=113, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 29260; Mature: 29129
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPSDQELLAIASAAADAGAAELSHYWGNLSQVRSKGRAGDLVTEADLAAEAAVLRLLQE CCCCHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH RTPEVAVLAEESGHQPGSDRELQWCVDPLDGTTNYAHGFPFFACSIGLLRHGKPLLGAIA CCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHC APGLNQRYSGGLGLGAWCNGDPLQVSSCQSLADSLLVTGFAYDRRERIDNNYSEFCYFSH CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEECC RTHGVRRGGAAALDLALVAAGRLDGYWERGLQPWDLAAGVALVQAAGGLVCDYDGSALEL CCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCEEEE SSGRVVATNAALQGPLLQGLSECQPLPPATYNAEIPAGP CCCEEEEECCHHHCHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure SPSDQELLAIASAAADAGAAELSHYWGNLSQVRSKGRAGDLVTEADLAAEAAVLRLLQE CCCHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH RTPEVAVLAEESGHQPGSDRELQWCVDPLDGTTNYAHGFPFFACSIGLLRHGKPLLGAIA CCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHC APGLNQRYSGGLGLGAWCNGDPLQVSSCQSLADSLLVTGFAYDRRERIDNNYSEFCYFSH CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEECC RTHGVRRGGAAALDLALVAAGRLDGYWERGLQPWDLAAGVALVQAAGGLVCDYDGSALEL CCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCEEEE SSGRVVATNAALQGPLLQGLSECQPLPPATYNAEIPAGP CCCEEEEECCHHHCHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]