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The map label for this gene is petF [H]

Identifier: 148242466

GI number: 148242466

Start: 1213855

End: 1214223

Strand: Direct

Name: petF [H]

Synonym: SynRCC307_1367

Alternate gene names: 148242466

Gene position: 1213855-1214223 (Clockwise)

Preceding gene: 148242464

Following gene: 148242467

Centisome position: 54.56

GC content: 60.16

Gene sequence:

>369_bases
ATGAGCCCACGGCACCGGGTCACGGTCCATGACCGGCAGAACAATCGAGTCCTCAGCGCCGATATCGAGGAGGGTCGTTA
TGTGCTGGAAGGTTTTGAAGCCAGCGGCCAACCCTTGCCATTTAGCTGCCGAAATGGCTGCTGCACCGCCTGTGCCGTCA
GGGTGCTGAGCGGCGAGCTGGATCAACGCGAAGCCTTGGGCCTCTCCCACGATTTACGCCGGCAGGGTTATGGGCTGCTT
TGCGTGGCTCGCGCCTATGGACCGGTGACGGTGGAAACCCAGGACGAAGACGAGGTCTACATGCTGCAGTTCGGCAATGC
CTTTGGAAAAGGCACCGTGCGCGCTGCTATTCCGCTGGAAGAAGAATGA

Upstream 100 bases:

>100_bases
CAGCATTTCCAGTGCTGCGCCTTCGACCACTCGGCCACCTCTCCTCTGCACAGCTGGGCTATGCAGCTGGCAACCTAGCA
GTTCAACTTGGCCAGCTTTG

Downstream 100 bases:

>100_bases
GCCCAAGCGATCAAGAGCTGCTGGCGATTGCCAGCGCGGCGGCCGATGCCGGCGCTGCCGAGTTGAGCCACTACTGGGGC
AATCTGAGCCAGGTGCGCAG

Product: ferredoxin

Products: NA

Alternate protein names: Ferredoxin II [H]

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MSPRHRVTVHDRQNNRVLSADIEEGRYVLEGFEASGQPLPFSCRNGCCTACAVRVLSGELDQREALGLSHDLRRQGYGLL
CVARAYGPVTVETQDEDEVYMLQFGNAFGKGTVRAAIPLEEE

Sequences:

>Translated_122_residues
MSPRHRVTVHDRQNNRVLSADIEEGRYVLEGFEASGQPLPFSCRNGCCTACAVRVLSGELDQREALGLSHDLRRQGYGLL
CVARAYGPVTVETQDEDEVYMLQFGNAFGKGTVRAAIPLEEE
>Mature_121_residues
SPRHRVTVHDRQNNRVLSADIEEGRYVLEGFEASGQPLPFSCRNGCCTACAVRVLSGELDQREALGLSHDLRRQGYGLLC
VARAYGPVTVETQDEDEVYMLQFGNAFGKGTVRAAIPLEEE

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR010241
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 13500; Mature: 13369

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPRHRVTVHDRQNNRVLSADIEEGRYVLEGFEASGQPLPFSCRNGCCTACAVRVLSGEL
CCCCCEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCC
DQREALGLSHDLRRQGYGLLCVARAYGPVTVETQDEDEVYMLQFGNAFGKGTVRAAIPLE
CCHHHCCCCHHHHHCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCEEEEECCCC
EE
CC
>Mature Secondary Structure 
SPRHRVTVHDRQNNRVLSADIEEGRYVLEGFEASGQPLPFSCRNGCCTACAVRVLSGEL
CCCCEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCC
DQREALGLSHDLRRQGYGLLCVARAYGPVTVETQDEDEVYMLQFGNAFGKGTVRAAIPLE
CCHHHCCCCHHHHHCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCEEEEECCCC
EE
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3041005; 2843173 [H]