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The map label for this gene is pcxA

Identifier: 148242332

GI number: 148242332

Start: 1093645

End: 1094784

Strand: Direct

Name: pcxA

Synonym: SynRCC307_1233

Alternate gene names: 148242332

Gene position: 1093645-1094784 (Clockwise)

Preceding gene: 148242331

Following gene: 148242333

Centisome position: 49.15

GC content: 56.32

Gene sequence:

>1140_bases
ATGGGACTGAATGACTGGCTTGGCACCTTTGCCAAGGCCGAAGGACTGGATTTGAGTAGCGATTTGGAGCAGGCCTATGA
GGCTGCTCTGATGATCCAAGGCTTAGAGCTCGAATATTTCAACGACCGCCCTGTTCGCACCGATGTCAATTTGGGTTTGC
CGCAAGCAACCCAAACGCAGATCTTTCGCCGCTTTCGCTCGGCATTGGAGATTTGCCGTGCCCTGCTCTCATCGATTGAG
CGCCAGCGCGCCCAGCTCGACAGCCAGGAACTGCGGCAGCTGCAGCTGATTGAGTCGGTGGTGCGGCGCTATCGCAGCAA
AGACGGTCAAACCCTGTTTCAACGCCCGGACCCTCTACCCCGCAGTCTGCTTGGGGTGTTTGATCGGGTTCGCAATCAAT
TGGATCCAGAAGCCGAAGCCAATGTGGTGGCTGGTTTCCGGCGCCGGCGTGATTCCACGTTGGTGTCGCTGCGGATCCTG
CTGTTGATGATTTTGGTGCCACTGCTGTTGCAGCAGATTTCGCGCACCTATGTGATCTCACCCTTGGTGGATCGCATTGC
CCCTGATATTCCTTTCCTCAGTTACACCAAGCCACGGCTGCAGCAATCTGCGGTGGCCAGCCTGCGGGAATACAAAGCTG
AGATCGAATTTGCAGCGCTACTGGAGGGAGAAGACAGCCCATCGGTGGAAGAGCTGCGCCAAAAGCTCACGCTCAAAGCA
GCCGAGCTGAAAGATGAGGCGGACTCCGAGAGCACCACAGCGATCAAAAACGTGCTCGCCGATGTGGTGGCCACCATCGG
CTTTGTGTTGGTTTGCCTGTTTGGCCGCGATGAAATCCGTGTGCTGCGCGGCTTTTTTGACGAGGTGGTCTACGGCCTCA
GCGATAACGCCAAGGCATTTGTGATCATCCTGTTCACCGACATTTTCGTTGGTTTCCACAGCCCAGAGGGTTGGACTGTG
CTCCTGCAGGGAATCTCTTCTCATCTGGGGATTCCAGCTGAAGAGCAATTCATTGATCTGTTCATCGCCACCTTCCCGGT
GATCCTGGCGACGATCTTCAAGTACTGGATCTTCCGCTACCTCAACCGCGTGTCGCCGTCCTCGGTGACAACCCTGCGCG
GCATGAATGGCGGTGGCTAA

Upstream 100 bases:

>100_bases
GGCCGTGCTGTTGGTTTTGGGAACGCTTGTGCCGATGGCCACTTGGTGGGTGTTCTCTCGCTGAACCTCGGCATCATGGG
CTGACGCCCAGTTCGACGGC

Downstream 100 bases:

>100_bases
TCACCTGTTGATCACCGGTCCATCGCGCGGCGGCAAAAGTGAATGGGCGGAACAGCGCATCCGCGAGATGGCTGGTGCAG
CCGCAATCACCTATCTCGCC

Product: proton extrusion protein PcxA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MGLNDWLGTFAKAEGLDLSSDLEQAYEAALMIQGLELEYFNDRPVRTDVNLGLPQATQTQIFRRFRSALEICRALLSSIE
RQRAQLDSQELRQLQLIESVVRRYRSKDGQTLFQRPDPLPRSLLGVFDRVRNQLDPEAEANVVAGFRRRRDSTLVSLRIL
LLMILVPLLLQQISRTYVISPLVDRIAPDIPFLSYTKPRLQQSAVASLREYKAEIEFAALLEGEDSPSVEELRQKLTLKA
AELKDEADSESTTAIKNVLADVVATIGFVLVCLFGRDEIRVLRGFFDEVVYGLSDNAKAFVIILFTDIFVGFHSPEGWTV
LLQGISSHLGIPAEEQFIDLFIATFPVILATIFKYWIFRYLNRVSPSSVTTLRGMNGGG

Sequences:

>Translated_379_residues
MGLNDWLGTFAKAEGLDLSSDLEQAYEAALMIQGLELEYFNDRPVRTDVNLGLPQATQTQIFRRFRSALEICRALLSSIE
RQRAQLDSQELRQLQLIESVVRRYRSKDGQTLFQRPDPLPRSLLGVFDRVRNQLDPEAEANVVAGFRRRRDSTLVSLRIL
LLMILVPLLLQQISRTYVISPLVDRIAPDIPFLSYTKPRLQQSAVASLREYKAEIEFAALLEGEDSPSVEELRQKLTLKA
AELKDEADSESTTAIKNVLADVVATIGFVLVCLFGRDEIRVLRGFFDEVVYGLSDNAKAFVIILFTDIFVGFHSPEGWTV
LLQGISSHLGIPAEEQFIDLFIATFPVILATIFKYWIFRYLNRVSPSSVTTLRGMNGGG
>Mature_378_residues
GLNDWLGTFAKAEGLDLSSDLEQAYEAALMIQGLELEYFNDRPVRTDVNLGLPQATQTQIFRRFRSALEICRALLSSIER
QRAQLDSQELRQLQLIESVVRRYRSKDGQTLFQRPDPLPRSLLGVFDRVRNQLDPEAEANVVAGFRRRRDSTLVSLRILL
LMILVPLLLQQISRTYVISPLVDRIAPDIPFLSYTKPRLQQSAVASLREYKAEIEFAALLEGEDSPSVEELRQKLTLKAA
ELKDEADSESTTAIKNVLADVVATIGFVLVCLFGRDEIRVLRGFFDEVVYGLSDNAKAFVIILFTDIFVGFHSPEGWTVL
LQGISSHLGIPAEEQFIDLFIATFPVILATIFKYWIFRYLNRVSPSSVTTLRGMNGGG

Specific function: Involved in light-induced Na(+)-dependent proton extrusion. Also seems to be involved in CO(2) transport

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cemA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PCXA_SYNR3 (A5GTC7)

Other databases:

- EMBL:   CT978603
- RefSeq:   YP_001227489.1
- STRING:   A5GTC7
- GeneID:   5158713
- GenomeReviews:   CT978603_GR
- KEGG:   syr:SynRCC307_1233
- eggNOG:   NOG06592
- HOGENOM:   HBG439473
- OMA:   ATIFKYW
- ProtClustDB:   PRK02507
- HAMAP:   MF_01308
- InterPro:   IPR004282

Pfam domain/function: PF03040 CemA

EC number: NA

Molecular weight: Translated: 42747; Mature: 42616

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x22d5ece4)-; HASH(0x23badbac)-; HASH(0x23c69bc0)-; HASH(0x22b68420)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLNDWLGTFAKAEGLDLSSDLEQAYEAALMIQGLELEYFNDRPVRTDVNLGLPQATQTQ
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCHHHHH
IFRRFRSALEICRALLSSIERQRAQLDSQELRQLQLIESVVRRYRSKDGQTLFQRPDPLP
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCH
RSLLGVFDRVRNQLDPEAEANVVAGFRRRRDSTLVSLRILLLMILVPLLLQQISRTYVIS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLVDRIAPDIPFLSYTKPRLQQSAVASLREYKAEIEFAALLEGEDSPSVEELRQKLTLKA
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
AELKDEADSESTTAIKNVLADVVATIGFVLVCLFGRDEIRVLRGFFDEVVYGLSDNAKAF
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEE
VIILFTDIFVGFHSPEGWTVLLQGISSHLGIPAEEQFIDLFIATFPVILATIFKYWIFRY
EEHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNRVSPSSVTTLRGMNGGG
HHHCCCCHHHHCCCCCCCH
>Mature Secondary Structure 
GLNDWLGTFAKAEGLDLSSDLEQAYEAALMIQGLELEYFNDRPVRTDVNLGLPQATQTQ
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCHHHHH
IFRRFRSALEICRALLSSIERQRAQLDSQELRQLQLIESVVRRYRSKDGQTLFQRPDPLP
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCH
RSLLGVFDRVRNQLDPEAEANVVAGFRRRRDSTLVSLRILLLMILVPLLLQQISRTYVIS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLVDRIAPDIPFLSYTKPRLQQSAVASLREYKAEIEFAALLEGEDSPSVEELRQKLTLKA
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
AELKDEADSESTTAIKNVLADVVATIGFVLVCLFGRDEIRVLRGFFDEVVYGLSDNAKAF
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEE
VIILFTDIFVGFHSPEGWTVLLQGISSHLGIPAEEQFIDLFIATFPVILATIFKYWIFRY
EEHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNRVSPSSVTTLRGMNGGG
HHHCCCCHHHHCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA