Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242331

Identifier: 148242331

GI number: 148242331

Start: 1092916

End: 1093608

Strand: Direct

Name: 148242331

Synonym: SynRCC307_1232

Alternate gene names: NA

Gene position: 1092916-1093608 (Clockwise)

Preceding gene: 148242330

Following gene: 148242332

Centisome position: 49.12

GC content: 57.72

Gene sequence:

>693_bases
ATGAAGGGCAGACTGGGCAGCGATTGCCTGGGGGTCATGGCTCGTCTTTTGCCGCTATTGCTTCTGCTTGTCAGCTTGGC
GCTGCCTGCCTTGCCGGCTTTGGCTGTTGCTCCCGCAGACTTTCCAGCCGGCGCACCCGAGGGCCACGTGTTGGATTCAG
CCGATGTGCTGAGCCGGGCCTCCACTGGTGAATTGGGTGCACGCTTAGCCAACTTTGAGAGCGATCACATCAATGCGAAT
TTGGTGACGGTTAAGCGTCTCGACTACAACGTTGACCTTGATTTGTTTGCCTCTGAGCTGCTCAGCCGCTGGCACGGTTC
CGACGATGACAGTGATCTGTTGATCGCGATTGATTCAGGGGCCAACGCAGCTCGTATTGCTGCCGACCCCACCCTGTTGC
AGCGTTTGCCCAATGCGCTGCTTGAGAGCACAGCCGATGAAACGATGTCGGTAGCCCTGCGCGATGGTGGCCGTTACCGC
CAGGCCACGATTGATGCCCTCTCCCGACTGGAAACGGTCTTAGCTGGTCAAGAAGATCCCGGTCCTCCCGAACTGATTGA
GCAAGTGGCCGTTGTGAGCAATGTCCCAACCAAGGAAGAGACCGAAGAGAGCAATGCCTTGATTTGGGTGGCCGTGCTGT
TGGTTTTGGGAACGCTTGTGCCGATGGCCACTTGGTGGGTGTTCTCTCGCTGA

Upstream 100 bases:

>100_bases
ATCAGCTCGCCGGCCATTTGGCCCTACCCGAGACGATGAGCCAGCAGATCATCACGGTGATGGACATCTTGCACCGTGAC
GCTTTGGCCATGGCGGGCGA

Downstream 100 bases:

>100_bases
ACCTCGGCATCATGGGCTGACGCCCAGTTCGACGGCATGGGACTGAATGACTGGCTTGGCACCTTTGCCAAGGCCGAAGG
ACTGGATTTGAGTAGCGATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MKGRLGSDCLGVMARLLPLLLLLVSLALPALPALAVAPADFPAGAPEGHVLDSADVLSRASTGELGARLANFESDHINAN
LVTVKRLDYNVDLDLFASELLSRWHGSDDDSDLLIAIDSGANAARIAADPTLLQRLPNALLESTADETMSVALRDGGRYR
QATIDALSRLETVLAGQEDPGPPELIEQVAVVSNVPTKEETEESNALIWVAVLLVLGTLVPMATWWVFSR

Sequences:

>Translated_230_residues
MKGRLGSDCLGVMARLLPLLLLLVSLALPALPALAVAPADFPAGAPEGHVLDSADVLSRASTGELGARLANFESDHINAN
LVTVKRLDYNVDLDLFASELLSRWHGSDDDSDLLIAIDSGANAARIAADPTLLQRLPNALLESTADETMSVALRDGGRYR
QATIDALSRLETVLAGQEDPGPPELIEQVAVVSNVPTKEETEESNALIWVAVLLVLGTLVPMATWWVFSR
>Mature_230_residues
MKGRLGSDCLGVMARLLPLLLLLVSLALPALPALAVAPADFPAGAPEGHVLDSADVLSRASTGELGARLANFESDHINAN
LVTVKRLDYNVDLDLFASELLSRWHGSDDDSDLLIAIDSGANAARIAADPTLLQRLPNALLESTADETMSVALRDGGRYR
QATIDALSRLETVLAGQEDPGPPELIEQVAVVSNVPTKEETEESNALIWVAVLLVLGTLVPMATWWVFSR

Specific function: Unknown

COG id: COG1512

COG function: function code R; Beta-propeller domains of methanol dehydrogenase type

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24496; Mature: 24496

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGRLGSDCLGVMARLLPLLLLLVSLALPALPALAVAPADFPAGAPEGHVLDSADVLSRA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECHHHHHHHC
STGELGARLANFESDHINANLVTVKRLDYNVDLDLFASELLSRWHGSDDDSDLLIAIDSG
CCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECC
ANAARIAADPTLLQRLPNALLESTADETMSVALRDGGRYRQATIDALSRLETVLAGQEDP
CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC
GPPELIEQVAVVSNVPTKEETEESNALIWVAVLLVLGTLVPMATWWVFSR
CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKGRLGSDCLGVMARLLPLLLLLVSLALPALPALAVAPADFPAGAPEGHVLDSADVLSRA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECHHHHHHHC
STGELGARLANFESDHINANLVTVKRLDYNVDLDLFASELLSRWHGSDDDSDLLIAIDSG
CCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECC
ANAARIAADPTLLQRLPNALLESTADETMSVALRDGGRYRQATIDALSRLETVLAGQEDP
CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC
GPPELIEQVAVVSNVPTKEETEESNALIWVAVLLVLGTLVPMATWWVFSR
CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA