| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242330
Identifier: 148242330
GI number: 148242330
Start: 1092470
End: 1092919
Strand: Direct
Name: 148242330
Synonym: SynRCC307_1231
Alternate gene names: NA
Gene position: 1092470-1092919 (Clockwise)
Preceding gene: 148242328
Following gene: 148242331
Centisome position: 49.1
GC content: 58.44
Gene sequence:
>450_bases TTGGCTGAAATAGGGGCAACTCCCGCTGATGCGATGACCCCGGAACAGGCTTTCGCTGCAATTTGTCTGGCTGCTGTGGC CAGTGATGGGGTGGTGGGTCGCGATGAGGCCCGAAGCCTGCGGATTGAGTTGGAGTTTCGAACCCCCTATGTGGGCATGG ATGAAGCCACCATGGCGGGGTTGTTTGACGATCTGCTGGAGCTCTGGAGGAGCGAGGGCACCGAAGCCTTGGTCGCCAAA GCAGCCCCCTGCCTGAATCAGGTGCAGCGTGAAACCGCTTTGGCGGTGGCGATTCAATTGGTCCGCGCCGATCGAATCAT TGAGCCTGAAGAACTCAAATTCATTGATCAGCTCGCCGGCCATTTGGCCCTACCCGAGACGATGAGCCAGCAGATCATCA CGGTGATGGACATCTTGCACCGTGACGCTTTGGCCATGGCGGGCGAATGA
Upstream 100 bases:
>100_bases CAACGAGCAGCAAGCCAACGACACCACAGCCAAGAACCACGCGGGCTTGTGATGGCATGGACCTCATGGCTTTGCTGCAA GGCTGCCATTCCACCGCGCT
Downstream 100 bases:
>100_bases AGGGCAGACTGGGCAGCGATTGCCTGGGGGTCATGGCTCGTCTTTTGCCGCTATTGCTTCTGCTTGTCAGCTTGGCGCTG CCTGCCTTGCCGGCTTTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MAEIGATPADAMTPEQAFAAICLAAVASDGVVGRDEARSLRIELEFRTPYVGMDEATMAGLFDDLLELWRSEGTEALVAK AAPCLNQVQRETALAVAIQLVRADRIIEPEELKFIDQLAGHLALPETMSQQIITVMDILHRDALAMAGE
Sequences:
>Translated_149_residues MAEIGATPADAMTPEQAFAAICLAAVASDGVVGRDEARSLRIELEFRTPYVGMDEATMAGLFDDLLELWRSEGTEALVAK AAPCLNQVQRETALAVAIQLVRADRIIEPEELKFIDQLAGHLALPETMSQQIITVMDILHRDALAMAGE >Mature_148_residues AEIGATPADAMTPEQAFAAICLAAVASDGVVGRDEARSLRIELEFRTPYVGMDEATMAGLFDDLLELWRSEGTEALVAKA APCLNQVQRETALAVAIQLVRADRIIEPEELKFIDQLAGHLALPETMSQQIITVMDILHRDALAMAGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16108; Mature: 15977
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEIGATPADAMTPEQAFAAICLAAVASDGVVGRDEARSLRIELEFRTPYVGMDEATMAG CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHH LFDDLLELWRSEGTEALVAKAAPCLNQVQRETALAVAIQLVRADRIIEPEELKFIDQLAG HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH HLALPETMSQQIITVMDILHRDALAMAGE HHCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AEIGATPADAMTPEQAFAAICLAAVASDGVVGRDEARSLRIELEFRTPYVGMDEATMAG CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHH LFDDLLELWRSEGTEALVAKAAPCLNQVQRETALAVAIQLVRADRIIEPEELKFIDQLAG HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH HLALPETMSQQIITVMDILHRDALAMAGE HHCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA