| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242328
Identifier: 148242328
GI number: 148242328
Start: 1090651
End: 1091820
Strand: Direct
Name: 148242328
Synonym: SynRCC307_1229
Alternate gene names: NA
Gene position: 1090651-1091820 (Clockwise)
Preceding gene: 148242327
Following gene: 148242330
Centisome position: 49.02
GC content: 56.67
Gene sequence:
>1170_bases TTGAAGGTCTTTGCTCTAGGCGCGGGAGCGGGGCTGCTCTGTTTGCTGTTGCATGGATGCGTCGGTGTGTCGCAAAGTCC AGAGCCAGCGAAACCGTTTCAGTTCCGTAGCCTCACACTTCGGCAAAACGATGAGGCTGGTGAGCCCCTTTGGGAGTTAC GCAGCCCCCGCAGCCGCTATCAACTCGACAACCGCCAAGCGGTTGTGACCGCTCCAGTGGGGGTGCTTTATCGAAAAGGG GAGCCCGCCTATCGGCTGAGTGCACCCAAAGGGTTATTAATCCGCGATGGCGAGCAAGTCGAACTGATTGATGGCGTTCA CCTTCGGGCCTTGGATGGCAGTGGGTTGGTGATCACAGGCAACCGCGCTGTATGGACACCCAATGACGATCTTTTGGTTT TGCAAGGTTCTCCCAAGGCTGAGGATCCACAGCAACTGCTCACCGCAAGGCACGCTCAGTTCGATTCCAAACTCGAACAA CTTCAGTTGCGCGACAACTTGGTCTTGAGACGCTGGAACAAAGGTCAATCGCACCGTGAGCCAGCAACTTTGCTGTTGCG TAGCCCAGAAGCTGACTGGAATCTCAAATCTGGCGCTTTGACCGTGGCAGGTCCTGTCAAAGGAGTGCAGCGGCCCGAGG CCAACCGGCAACGGTTGTTGTCGGCCTCCGCATTGACCGGCAATACCACCGAGAACTGGATTGACTTTGAGGCTCCCGTC ACAGTCGATGAAGCCGCCGAAGGCTTGACATTGCGAGCCGGTAAAACCCGTTGGTGGACCCAAGACAACCGCCTGAGCTC AAGCGCACCGGCTCAGGGAACCTTCAAAAAGCTCACAGCCAGTGGTGGCGGATTTGAGCTGTGGGATCAGCGCAAGGAAC TCTTGCTCACGAGCGATTGCCAGCTGCAACAGCCTGATCAATCGTTAAACGCCAAACAGTGCCGTTGGAATTGGGACACC GGTGAATTGATGGCCCGAGGTTCCGTTGAGCTGCGGCGTGAACAACTCAATCAACTCACGCGAGCGGAAGTCATGCAGGG CTTCACGGGTGAGGATGGGCAGATTCGCTTCACAGCTCCTGGTTCTCGGGTGCAGACGAGGCTCGAGTTTGATCAGCCTG ATTCAGCTGAGCCATCGGATCGCAATCAAGCTGCTCCAGTGCAGTTCTGA
Upstream 100 bases:
>100_bases CAGGGGATTGGATCGAGCTTTTGAATTGGGGGCAGCTCACGCCAGGCCCATTGGATGCACCATCCCCGCTGCTGCAACGC TTGGAGCTGGAGGAGCCAAT
Downstream 100 bases:
>100_bases GCTTTTCAGCCACGCCTTTGATCCAGATCTCATCGCTGCGGCTGAAACAACGCACAGACCAGCCCGCCACCAAAAGCCAT CCCCTGGCGCCTAGGGGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MKVFALGAGAGLLCLLLHGCVGVSQSPEPAKPFQFRSLTLRQNDEAGEPLWELRSPRSRYQLDNRQAVVTAPVGVLYRKG EPAYRLSAPKGLLIRDGEQVELIDGVHLRALDGSGLVITGNRAVWTPNDDLLVLQGSPKAEDPQQLLTARHAQFDSKLEQ LQLRDNLVLRRWNKGQSHREPATLLLRSPEADWNLKSGALTVAGPVKGVQRPEANRQRLLSASALTGNTTENWIDFEAPV TVDEAAEGLTLRAGKTRWWTQDNRLSSSAPAQGTFKKLTASGGGFELWDQRKELLLTSDCQLQQPDQSLNAKQCRWNWDT GELMARGSVELRREQLNQLTRAEVMQGFTGEDGQIRFTAPGSRVQTRLEFDQPDSAEPSDRNQAAPVQF
Sequences:
>Translated_389_residues MKVFALGAGAGLLCLLLHGCVGVSQSPEPAKPFQFRSLTLRQNDEAGEPLWELRSPRSRYQLDNRQAVVTAPVGVLYRKG EPAYRLSAPKGLLIRDGEQVELIDGVHLRALDGSGLVITGNRAVWTPNDDLLVLQGSPKAEDPQQLLTARHAQFDSKLEQ LQLRDNLVLRRWNKGQSHREPATLLLRSPEADWNLKSGALTVAGPVKGVQRPEANRQRLLSASALTGNTTENWIDFEAPV TVDEAAEGLTLRAGKTRWWTQDNRLSSSAPAQGTFKKLTASGGGFELWDQRKELLLTSDCQLQQPDQSLNAKQCRWNWDT GELMARGSVELRREQLNQLTRAEVMQGFTGEDGQIRFTAPGSRVQTRLEFDQPDSAEPSDRNQAAPVQF >Mature_389_residues MKVFALGAGAGLLCLLLHGCVGVSQSPEPAKPFQFRSLTLRQNDEAGEPLWELRSPRSRYQLDNRQAVVTAPVGVLYRKG EPAYRLSAPKGLLIRDGEQVELIDGVHLRALDGSGLVITGNRAVWTPNDDLLVLQGSPKAEDPQQLLTARHAQFDSKLEQ LQLRDNLVLRRWNKGQSHREPATLLLRSPEADWNLKSGALTVAGPVKGVQRPEANRQRLLSASALTGNTTENWIDFEAPV TVDEAAEGLTLRAGKTRWWTQDNRLSSSAPAQGTFKKLTASGGGFELWDQRKELLLTSDCQLQQPDQSLNAKQCRWNWDT GELMARGSVELRREQLNQLTRAEVMQGFTGEDGQIRFTAPGSRVQTRLEFDQPDSAEPSDRNQAAPVQF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43131; Mature: 43131
Theoretical pI: Translated: 7.46; Mature: 7.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVFALGAGAGLLCLLLHGCVGVSQSPEPAKPFQFRSLTLRQNDEAGEPLWELRSPRSRY CEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHCCCHHHH QLDNRQAVVTAPVGVLYRKGEPAYRLSAPKGLLIRDGEQVELIDGVHLRALDGSGLVITG CCCCCEEEEEECCEEEEECCCCCEEECCCCCEEEECCCEEEEECCEEEEEECCCCEEEEC NRAVWTPNDDLLVLQGSPKAEDPQQLLTARHAQFDSKLEQLQLRDNLVLRRWNKGQSHRE CEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCC PATLLLRSPEADWNLKSGALTVAGPVKGVQRPEANRQRLLSASALTGNTTENWIDFEAPV CEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCE TVDEAAEGLTLRAGKTRWWTQDNRLSSSAPAQGTFKKLTASGGGFELWDQRKELLLTSDC EHHHHCCCEEEECCCCEEECCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHEEEECCC QLQQPDQSLNAKQCRWNWDTGELMARGSVELRREQLNQLTRAEVMQGFTGEDGQIRFTAP CCCCCCCCCCCCCEEEECCHHHEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC GSRVQTRLEFDQPDSAEPSDRNQAAPVQF CHHEEEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKVFALGAGAGLLCLLLHGCVGVSQSPEPAKPFQFRSLTLRQNDEAGEPLWELRSPRSRY CEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHCCCHHHH QLDNRQAVVTAPVGVLYRKGEPAYRLSAPKGLLIRDGEQVELIDGVHLRALDGSGLVITG CCCCCEEEEEECCEEEEECCCCCEEECCCCCEEEECCCEEEEECCEEEEEECCCCEEEEC NRAVWTPNDDLLVLQGSPKAEDPQQLLTARHAQFDSKLEQLQLRDNLVLRRWNKGQSHRE CEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCC PATLLLRSPEADWNLKSGALTVAGPVKGVQRPEANRQRLLSASALTGNTTENWIDFEAPV CEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCE TVDEAAEGLTLRAGKTRWWTQDNRLSSSAPAQGTFKKLTASGGGFELWDQRKELLLTSDC EHHHHCCCEEEECCCCEEECCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHEEEECCC QLQQPDQSLNAKQCRWNWDTGELMARGSVELRREQLNQLTRAEVMQGFTGEDGQIRFTAP CCCCCCCCCCCCCEEEECCHHHEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC GSRVQTRLEFDQPDSAEPSDRNQAAPVQF CHHEEEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA