| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242234
Identifier: 148242234
GI number: 148242234
Start: 1001150
End: 1002319
Strand: Direct
Name: 148242234
Synonym: SynRCC307_1135
Alternate gene names: NA
Gene position: 1001150-1002319 (Clockwise)
Preceding gene: 148242233
Following gene: 148242236
Centisome position: 45.0
GC content: 62.56
Gene sequence:
>1170_bases ATGCCGAAGCCTTGCTTCTTTGCCATTGATGTTCTGGTGGTTGGCGGCAGCGGCCGGGTGGGCGGCTCCACCTTGCGCTG GTTGCATCGGCTCAGTCGCCGAGCTGATGCTGGCTTGGCGCCACTGAAGCTCGCCAGCGGCGGTCGCAGCGTCTCCCGAT TTCAGGCCAGTCAACGGCGCCTCAAGCAGCCGGATTTGGCCTTTGTTGAGATTGATCTAGGCCGATCGGTGGAGCAGCTC ACCGCAGCCGTGCGTGGGGTCCAGTTGGTGGTGCACACCGCCGGGCCCTTTCAAGGGCGCAACCAGCCCAAGTTGCTTCA GGCCTGCATTGCGGCCGGCGTTGCCTACTGCGACGTTTGTGATGAGTGGCCCTTAAGCCAGCAGGCCAAGCTGCTCAGTG TTGATGCGGCCGTTGCTGGCATTCCGGCGGTGGTCTCCTGTGGCATTTGGCCTGGGGCCAGTGCCTTGATGGCTGCTGAA GCCGTGGATCGCTTGGGCGGCCCTGGTGCCTGTGATGAGCTGGAGCTGAGCTTTTTCACAGCAGGCACTGGAGGGGCTGG GCCCACCATCGTCAGCGCCACGTTTTTATTGCTGGCCAGTGATGCGCTCACCTTGAGCGCTGGTCAGCTCAGCGGCCAAC CAGCTTGGAGTGGGCGCCGCATCGTCGACTTTGGCCATGGTGTTGGCCGTCGCGCCTGCTTCCTGCTCGACAACCCCGAT GTGCCCAGCACTGCCGGGGCGCTGCAAATCGCCAATTGCGCATCACGCTTTGGCACGGCACCCGCGCTGTGGAACCGGTT GTTTGCCGCGATGCAAAAGCTGCCTAGGCCGCTGCTACTGAATCGCCAGGCCATGCATGCCTTCTCGCTGGTTTCGATGC CGGTGATTCGTGCGGTTGATGCAGTCATTGGCAGCACCAATGCCATGCGCATCGATGCCCATGGCGCTGCCGGGAGCCTC TCTTTGCGTTGCGTGCACCACAGCCTGGAGGACTGTGTTGGTCAGGCCACAGCTGCTTTTGCGTTGGAAATGCTGCGCGG CCGTAGCAGTGGATCAATAGGTGCATCCAGTATCCCAGCCGGCGTGTGGTTCCCGGCTGAGCTGAATCCGGTGGCACGGC GCAACATTCTCGAGGTTGTGCGCCAGAAGGCTCTCATCTGGGAGCTGTGA
Upstream 100 bases:
>100_bases CTTGGTGGCCTTTCTGCTGTTAGTCGGCTGGAAACAGCCGGCATGGCGGGTGGTGATGGCTTGCGCTCTTGTTGGCGCCG TGCTGTTGCCGGCTTAAGTG
Downstream 100 bases:
>100_bases GCAGTAACGCGGCCGATTGCGCTGCAATCGCGCCTGCAGGTGTGGCCGCTTCTGTGCTCCACAGCACTTCGGCGCTGGCT TGGGGATCGGGCAAAGCCAG
Product: saccharopine dehydrogenase related protein
Products: NA
Alternate protein names: Saccharopine Dehydrogenase Related Protein
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MPKPCFFAIDVLVVGGSGRVGGSTLRWLHRLSRRADAGLAPLKLASGGRSVSRFQASQRRLKQPDLAFVEIDLGRSVEQL TAAVRGVQLVVHTAGPFQGRNQPKLLQACIAAGVAYCDVCDEWPLSQQAKLLSVDAAVAGIPAVVSCGIWPGASALMAAE AVDRLGGPGACDELELSFFTAGTGGAGPTIVSATFLLLASDALTLSAGQLSGQPAWSGRRIVDFGHGVGRRACFLLDNPD VPSTAGALQIANCASRFGTAPALWNRLFAAMQKLPRPLLLNRQAMHAFSLVSMPVIRAVDAVIGSTNAMRIDAHGAAGSL SLRCVHHSLEDCVGQATAAFALEMLRGRSSGSIGASSIPAGVWFPAELNPVARRNILEVVRQKALIWEL
Sequences:
>Translated_389_residues MPKPCFFAIDVLVVGGSGRVGGSTLRWLHRLSRRADAGLAPLKLASGGRSVSRFQASQRRLKQPDLAFVEIDLGRSVEQL TAAVRGVQLVVHTAGPFQGRNQPKLLQACIAAGVAYCDVCDEWPLSQQAKLLSVDAAVAGIPAVVSCGIWPGASALMAAE AVDRLGGPGACDELELSFFTAGTGGAGPTIVSATFLLLASDALTLSAGQLSGQPAWSGRRIVDFGHGVGRRACFLLDNPD VPSTAGALQIANCASRFGTAPALWNRLFAAMQKLPRPLLLNRQAMHAFSLVSMPVIRAVDAVIGSTNAMRIDAHGAAGSL SLRCVHHSLEDCVGQATAAFALEMLRGRSSGSIGASSIPAGVWFPAELNPVARRNILEVVRQKALIWEL >Mature_388_residues PKPCFFAIDVLVVGGSGRVGGSTLRWLHRLSRRADAGLAPLKLASGGRSVSRFQASQRRLKQPDLAFVEIDLGRSVEQLT AAVRGVQLVVHTAGPFQGRNQPKLLQACIAAGVAYCDVCDEWPLSQQAKLLSVDAAVAGIPAVVSCGIWPGASALMAAEA VDRLGGPGACDELELSFFTAGTGGAGPTIVSATFLLLASDALTLSAGQLSGQPAWSGRRIVDFGHGVGRRACFLLDNPDV PSTAGALQIANCASRFGTAPALWNRLFAAMQKLPRPLLLNRQAMHAFSLVSMPVIRAVDAVIGSTNAMRIDAHGAAGSLS LRCVHHSLEDCVGQATAAFALEMLRGRSSGSIGASSIPAGVWFPAELNPVARRNILEVVRQKALIWEL
Specific function: Unknown
COG id: COG1748
COG function: function code E; Saccharopine dehydrogenase and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40757; Mature: 40625
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKPCFFAIDVLVVGGSGRVGGSTLRWLHRLSRRADAGLAPLKLASGGRSVSRFQASQRR CCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHH LKQPDLAFVEIDLGRSVEQLTAAVRGVQLVVHTAGPFQGRNQPKLLQACIAAGVAYCDVC CCCCCEEEEEEECCCCHHHHHHHHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCC DEWPLSQQAKLLSVDAAVAGIPAVVSCGIWPGASALMAAEAVDRLGGPGACDELELSFFT CCCCCCCCCHHEEHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEE AGTGGAGPTIVSATFLLLASDALTLSAGQLSGQPAWSGRRIVDFGHGVGRRACFLLDNPD CCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCC VPSTAGALQIANCASRFGTAPALWNRLFAAMQKLPRPLLLNRQAMHAFSLVSMPVIRAVD CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHHH AVIGSTNAMRIDAHGAAGSLSLRCVHHSLEDCVGQATAAFALEMLRGRSSGSIGASSIPA HHHCCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GVWFPAELNPVARRNILEVVRQKALIWEL CEECCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PKPCFFAIDVLVVGGSGRVGGSTLRWLHRLSRRADAGLAPLKLASGGRSVSRFQASQRR CCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHH LKQPDLAFVEIDLGRSVEQLTAAVRGVQLVVHTAGPFQGRNQPKLLQACIAAGVAYCDVC CCCCCEEEEEEECCCCHHHHHHHHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCC DEWPLSQQAKLLSVDAAVAGIPAVVSCGIWPGASALMAAEAVDRLGGPGACDELELSFFT CCCCCCCCCHHEEHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEE AGTGGAGPTIVSATFLLLASDALTLSAGQLSGQPAWSGRRIVDFGHGVGRRACFLLDNPD CCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCC VPSTAGALQIANCASRFGTAPALWNRLFAAMQKLPRPLLLNRQAMHAFSLVSMPVIRAVD CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHHH AVIGSTNAMRIDAHGAAGSLSLRCVHHSLEDCVGQATAAFALEMLRGRSSGSIGASSIPA HHHCCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GVWFPAELNPVARRNILEVVRQKALIWEL CEECCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA