| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is chrA [H]
Identifier: 148242233
GI number: 148242233
Start: 999941
End: 1001146
Strand: Direct
Name: chrA [H]
Synonym: SynRCC307_1134
Alternate gene names: 148242233
Gene position: 999941-1001146 (Clockwise)
Preceding gene: 148242227
Following gene: 148242234
Centisome position: 44.94
GC content: 62.27
Gene sequence:
>1206_bases ATGTCATGGAGGCCAATGATGGCTCCTGCCTTTGAGGTCTTCCGCCAGTTCTTGCTGCTGGGCTGCAGCTCCTTTGGCGG ACCCACAGCCCATCTGGGCTATTTCCGTGAGCGATTTGTGGAACGCGAGCGGTGGCTCACCGATGCGGCTTATGCCGATT TGATGGCCCTGGCGAGCCTGTTGCCTGGACCATCGAGCTCCCAGGTCGGCATGGGCATTGGCCTGTTGCGCGCCGGATGG TTTGGTGCGGTGGCGGCTTGGGTGGGATTCACCTTGCCATCGGCTGTGCTGATGATCCTGGCGGCAGCGCTGCTGACCAG CTATCCGGATTGGATGTCTGCTCCATGGCTGCAAGGTCTGATGGTGGCTGCTGTTGCGGTGGTGGCGCAGGCTGTCTTCG GCATGCAGCGTCGTCTAGCGCCAGATCCGCAGCGGGCCAGCGTCATGGTGGGCTCGGCTGTGCTTGTGCTGCTGGTGCAG ACCAGTTGGGTTCAGGTTTTGGCTTTGGTTGCCGGTGCTCTGGCTGGGCTGAGTTGGCTGGCGCCTCCTCCAGCGGGAGC CGCACCTCAGGCGATGTTGCAGGTGCCTGTGCGGCGATCGATTGCCGTCCTGTTGCTTGCTTTGTTCGCGCTCGTGGTGC TCGCCTTGCCCTGGCTGGGGGCGTCCGCCAGGCCGGTTGTGATCCAGCAGTTGAGCAGCTTCCTGCGCGCTGGTGCTCTG GTGTTTGGGGGCGGCCATGTGGTGTTGCCGCTGCTTGAGCAATCGCTCGTGCCGCCGGGATGGCTTGGCCTTGATCAGTT TTTGGCGGGTTACGGATTGGCGCAGTCGGTGCCTGGTCCCATGTTCAGCTTCTCGGCGTTCCTGGGTTTTGATCTGCAGG GCGGATTGCATGGGGTGATCGGTGCATTGTTGGCGTTGATCGCCCTGTTCACCCCGGCGTTCCTGTTGATTGGCGGTGTC TTGCCGTTTTGGGGCGACCTGGGTCGCTTGGGTTCCATGCGGCGTGCTCTTCAAGGCATCAACGCGGCGGTGGTTGGCAT CCTTTTGGCGGCCCTGTTTCAACCGCTCTGGCAAGTCGCGATTCGTGGTGTCGCTGACTTTTGCTTGGCCTTGGTGGCCT TTCTGCTGTTAGTCGGCTGGAAACAGCCGGCATGGCGGGTGGTGATGGCTTGCGCTCTTGTTGGCGCCGTGCTGTTGCCG GCTTAA
Upstream 100 bases:
>100_bases GGTCGCTGTGGTCAGCCATAACGTCTGCCTTCAAGCCCCCATAGTCTCCCGTGCCGTTGCAACCATGTGTCGCCTTTAAA CCGCCGCCCCTACGGTTTCC
Downstream 100 bases:
>100_bases GTGATGCCGAAGCCTTGCTTCTTTGCCATTGATGTTCTGGTGGTTGGCGGCAGCGGCCGGGTGGGCGGCTCCACCTTGCG CTGGTTGCATCGGCTCAGTC
Product: chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MSWRPMMAPAFEVFRQFLLLGCSSFGGPTAHLGYFRERFVERERWLTDAAYADLMALASLLPGPSSSQVGMGIGLLRAGW FGAVAAWVGFTLPSAVLMILAAALLTSYPDWMSAPWLQGLMVAAVAVVAQAVFGMQRRLAPDPQRASVMVGSAVLVLLVQ TSWVQVLALVAGALAGLSWLAPPPAGAAPQAMLQVPVRRSIAVLLLALFALVVLALPWLGASARPVVIQQLSSFLRAGAL VFGGGHVVLPLLEQSLVPPGWLGLDQFLAGYGLAQSVPGPMFSFSAFLGFDLQGGLHGVIGALLALIALFTPAFLLIGGV LPFWGDLGRLGSMRRALQGINAAVVGILLAALFQPLWQVAIRGVADFCLALVAFLLLVGWKQPAWRVVMACALVGAVLLP A
Sequences:
>Translated_401_residues MSWRPMMAPAFEVFRQFLLLGCSSFGGPTAHLGYFRERFVERERWLTDAAYADLMALASLLPGPSSSQVGMGIGLLRAGW FGAVAAWVGFTLPSAVLMILAAALLTSYPDWMSAPWLQGLMVAAVAVVAQAVFGMQRRLAPDPQRASVMVGSAVLVLLVQ TSWVQVLALVAGALAGLSWLAPPPAGAAPQAMLQVPVRRSIAVLLLALFALVVLALPWLGASARPVVIQQLSSFLRAGAL VFGGGHVVLPLLEQSLVPPGWLGLDQFLAGYGLAQSVPGPMFSFSAFLGFDLQGGLHGVIGALLALIALFTPAFLLIGGV LPFWGDLGRLGSMRRALQGINAAVVGILLAALFQPLWQVAIRGVADFCLALVAFLLLVGWKQPAWRVVMACALVGAVLLP A >Mature_400_residues SWRPMMAPAFEVFRQFLLLGCSSFGGPTAHLGYFRERFVERERWLTDAAYADLMALASLLPGPSSSQVGMGIGLLRAGWF GAVAAWVGFTLPSAVLMILAAALLTSYPDWMSAPWLQGLMVAAVAVVAQAVFGMQRRLAPDPQRASVMVGSAVLVLLVQT SWVQVLALVAGALAGLSWLAPPPAGAAPQAMLQVPVRRSIAVLLLALFALVVLALPWLGASARPVVIQQLSSFLRAGALV FGGGHVVLPLLEQSLVPPGWLGLDQFLAGYGLAQSVPGPMFSFSAFLGFDLQGGLHGVIGALLALIALFTPAFLLIGGVL PFWGDLGRLGSMRRALQGINAAVVGILLAALFQPLWQVAIRGVADFCLALVAFLLLVGWKQPAWRVVMACALVGAVLLPA
Specific function: May function in the active transport of chromate into the cell under sulfur-deficient conditions [H]
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 - InterPro: IPR014047 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 42207; Mature: 42076
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWRPMMAPAFEVFRQFLLLGCSSFGGPTAHLGYFRERFVERERWLTDAAYADLMALASL CCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPGPSSSQVGMGIGLLRAGWFGAVAAWVGFTLPSAVLMILAAALLTSYPDWMSAPWLQGL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH MVAAVAVVAQAVFGMQRRLAPDPQRASVMVGSAVLVLLVQTSWVQVLALVAGALAGLSWL HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC APPPAGAAPQAMLQVPVRRSIAVLLLALFALVVLALPWLGASARPVVIQQLSSFLRAGAL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC VFGGGHVVLPLLEQSLVPPGWLGLDQFLAGYGLAQSVPGPMFSFSAFLGFDLQGGLHGVI EECCCHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHCCCCCHHHHHHHHCCCCCCCHHHHH GALLALIALFTPAFLLIGGVLPFWGDLGRLGSMRRALQGINAAVVGILLAALFQPLWQVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IRGVADFCLALVAFLLLVGWKQPAWRVVMACALVGAVLLPA HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SWRPMMAPAFEVFRQFLLLGCSSFGGPTAHLGYFRERFVERERWLTDAAYADLMALASL CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPGPSSSQVGMGIGLLRAGWFGAVAAWVGFTLPSAVLMILAAALLTSYPDWMSAPWLQGL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH MVAAVAVVAQAVFGMQRRLAPDPQRASVMVGSAVLVLLVQTSWVQVLALVAGALAGLSWL HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC APPPAGAAPQAMLQVPVRRSIAVLLLALFALVVLALPWLGASARPVVIQQLSSFLRAGAL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC VFGGGHVVLPLLEQSLVPPGWLGLDQFLAGYGLAQSVPGPMFSFSAFLGFDLQGGLHGVI EECCCHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHCCCCCHHHHHHHHCCCCCCCHHHHH GALLALIALFTPAFLLIGGVLPFWGDLGRLGSMRRALQGINAAVVGILLAALFQPLWQVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IRGVADFCLALVAFLLLVGWKQPAWRVVMACALVGAVLLPA HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7536734 [H]