Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242236

Identifier: 148242236

GI number: 148242236

Start: 1003794

End: 1004960

Strand: Direct

Name: 148242236

Synonym: SynRCC307_1137

Alternate gene names: NA

Gene position: 1003794-1004960 (Clockwise)

Preceding gene: 148242234

Following gene: 148242239

Centisome position: 45.12

GC content: 64.01

Gene sequence:

>1167_bases
ATGGCCATGCCCGCTATCAGCGGCAGCCAGCGGCTCTGCAGAATTGAGGCACCACTGACAGATGGCGTGGCGGTAAGCGG
AGCCCAACCGGCATATCAGAACTGGGCTTGGTGGCCGCTGCTGCCCCTATACCCCTTTGGCCGCAGGCGCACGTTGCGCC
GTGAGCTGGTGCCTGGTCACATCTGGAGCTTTGAGCAGCTCCAAGGGGTGTTTTTCGTGGCCGTGCCCATCCGCATGACT
GCGGTGAAGCTCAAGGCTGGCTTGTTGCTGTATGCCCCAGTGGCTGCCACAGCCGAGTGCATCGCCCTGGTGCGCGAGCT
GGAAGCTGAGCATGGGCCTGTGGTGAGCATCGTGCATCCCACCAGTTCCGGCCTGGAGCACAAAGTGGGCGTGCCAGCGA
TGGCGCGGGCGTTTCCAAGCGCCGATGTGTGGGTTACGCCGGGGCAGTGGAGCTTTCCGCTGCCGCTACCGCTCAGCTGG
CTCGGCTTCCCTGCACGCCGCACCAAGGTGCTGTTCGACGATGGGGTGCCCCATGGCGACGAACTGCATTGGGAGCAGCT
TGGTCCCTTGCCCCTGGGGCCTGGCCCTTTTTGTGAGGCCACCATGTTGCATCGCGCCAGTGGCACCTTGCTCTGCACCG
ATGGCTTAATCGCCGTGTCCGAGCGCTGGCCCGAGCTCTTGGATCTCGCCCCCAAGCCGCTGCTGTATCACGGCCGCAAC
GACGGCACAGAACCCATGGACGACTGCCCGCAACGTCGCTTGCGGGGGTGGAAACGTCTGGTGCTGTTTGCCACCTGCCT
CAAGCCGCAGGCTGTTGAGCAGGTGTGGAGGCGCTTCCCTTTTCGTTGGCGCAGCGGCTGGGAGCAGGATTTTGCAGCGA
TCAGCCGTGGTGGGCAGCTGCGCGTGGCGCCAATCCTCGAGGATCTGGTGTTTCCGCGGCAGCGCCCCTTGATGGCCCAG
TGGCTGCGGCGCTGCGCTCAATTGCCGGTTAGGCGGCTTGTGCCCGCCCATTTCGATGCACCCATTGCCTGCACGCCAGA
GCAACTCAACGCCTTAGCCGATGCCTGGGAGCAGCAGGATCAACCTGCCGCTGAGTTGCAAGACAGAGCTTTCCTGCGGG
CGTTCAACCGACAAGTGGAACGCTTTGGCTTGGTGCCGAAGCCTTAG

Upstream 100 bases:

>100_bases
TCACAGCCTCGGCCACCCAAGCCGGTGGATCGCTGTAGGCCGTATCTGCCGGCAATGCTGCTGAACCCGCTGCCTTCTCG
CTAGCAAGTCACCAAGGCAA

Downstream 100 bases:

>100_bases
AGATCGATGGGCTCGTCGCCGTCGGGGCCAAACACAGCGCCTTCGAGTTCCATGCGCTGCTCCATCTGCCGCAGGAAGTA
GCCCGTCATCATCGCGGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MAMPAISGSQRLCRIEAPLTDGVAVSGAQPAYQNWAWWPLLPLYPFGRRRTLRRELVPGHIWSFEQLQGVFFVAVPIRMT
AVKLKAGLLLYAPVAATAECIALVRELEAEHGPVVSIVHPTSSGLEHKVGVPAMARAFPSADVWVTPGQWSFPLPLPLSW
LGFPARRTKVLFDDGVPHGDELHWEQLGPLPLGPGPFCEATMLHRASGTLLCTDGLIAVSERWPELLDLAPKPLLYHGRN
DGTEPMDDCPQRRLRGWKRLVLFATCLKPQAVEQVWRRFPFRWRSGWEQDFAAISRGGQLRVAPILEDLVFPRQRPLMAQ
WLRRCAQLPVRRLVPAHFDAPIACTPEQLNALADAWEQQDQPAAELQDRAFLRAFNRQVERFGLVPKP

Sequences:

>Translated_388_residues
MAMPAISGSQRLCRIEAPLTDGVAVSGAQPAYQNWAWWPLLPLYPFGRRRTLRRELVPGHIWSFEQLQGVFFVAVPIRMT
AVKLKAGLLLYAPVAATAECIALVRELEAEHGPVVSIVHPTSSGLEHKVGVPAMARAFPSADVWVTPGQWSFPLPLPLSW
LGFPARRTKVLFDDGVPHGDELHWEQLGPLPLGPGPFCEATMLHRASGTLLCTDGLIAVSERWPELLDLAPKPLLYHGRN
DGTEPMDDCPQRRLRGWKRLVLFATCLKPQAVEQVWRRFPFRWRSGWEQDFAAISRGGQLRVAPILEDLVFPRQRPLMAQ
WLRRCAQLPVRRLVPAHFDAPIACTPEQLNALADAWEQQDQPAAELQDRAFLRAFNRQVERFGLVPKP
>Mature_387_residues
AMPAISGSQRLCRIEAPLTDGVAVSGAQPAYQNWAWWPLLPLYPFGRRRTLRRELVPGHIWSFEQLQGVFFVAVPIRMTA
VKLKAGLLLYAPVAATAECIALVRELEAEHGPVVSIVHPTSSGLEHKVGVPAMARAFPSADVWVTPGQWSFPLPLPLSWL
GFPARRTKVLFDDGVPHGDELHWEQLGPLPLGPGPFCEATMLHRASGTLLCTDGLIAVSERWPELLDLAPKPLLYHGRND
GTEPMDDCPQRRLRGWKRLVLFATCLKPQAVEQVWRRFPFRWRSGWEQDFAAISRGGQLRVAPILEDLVFPRQRPLMAQW
LRRCAQLPVRRLVPAHFDAPIACTPEQLNALADAWEQQDQPAAELQDRAFLRAFNRQVERFGLVPKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43622; Mature: 43491

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMPAISGSQRLCRIEAPLTDGVAVSGAQPAYQNWAWWPLLPLYPFGRRRTLRRELVPGH
CCCCCCCCCCCEEEEECCCCCCEEECCCCCHHHCCCCCCCCCCCCCCCHHHHHHHCCCCC
IWSFEQLQGVFFVAVPIRMTAVKLKAGLLLYAPVAATAECIALVRELEAEHGPVVSIVHP
CCCHHHHCCEEEEEECHHHEEHHHHCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEECC
TSSGLEHKVGVPAMARAFPSADVWVTPGQWSFPLPLPLSWLGFPARRTKVLFDDGVPHGD
CCCCCCCCCCCCHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCCCHHEEEEEECCCCCCC
ELHWEQLGPLPLGPGPFCEATMLHRASGTLLCTDGLIAVSERWPELLDLAPKPLLYHGRN
CCCHHHCCCCCCCCCCCHHHHHHHHCCCCEEEECCEEEHHHHCHHHHHCCCCCEEEECCC
DGTEPMDDCPQRRLRGWKRLVLFATCLKPQAVEQVWRRFPFRWRSGWEQDFAAISRGGQL
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHCCCHHHHHHHHHCCCCE
RVAPILEDLVFPRQRPLMAQWLRRCAQLPVRRLVPAHFDAPIACTPEQLNALADAWEQQD
EEHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCCCEECHHHHHHHHHHHHHCC
QPAAELQDRAFLRAFNRQVERFGLVPKP
CCHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AMPAISGSQRLCRIEAPLTDGVAVSGAQPAYQNWAWWPLLPLYPFGRRRTLRRELVPGH
CCCCCCCCCCEEEEECCCCCCEEECCCCCHHHCCCCCCCCCCCCCCCHHHHHHHCCCCC
IWSFEQLQGVFFVAVPIRMTAVKLKAGLLLYAPVAATAECIALVRELEAEHGPVVSIVHP
CCCHHHHCCEEEEEECHHHEEHHHHCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEECC
TSSGLEHKVGVPAMARAFPSADVWVTPGQWSFPLPLPLSWLGFPARRTKVLFDDGVPHGD
CCCCCCCCCCCCHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCCCHHEEEEEECCCCCCC
ELHWEQLGPLPLGPGPFCEATMLHRASGTLLCTDGLIAVSERWPELLDLAPKPLLYHGRN
CCCHHHCCCCCCCCCCCHHHHHHHHCCCCEEEECCEEEHHHHCHHHHHCCCCCEEEECCC
DGTEPMDDCPQRRLRGWKRLVLFATCLKPQAVEQVWRRFPFRWRSGWEQDFAAISRGGQL
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHCCCHHHHHHHHHCCCCE
RVAPILEDLVFPRQRPLMAQWLRRCAQLPVRRLVPAHFDAPIACTPEQLNALADAWEQQD
EEHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCCCEECHHHHHHHHHHHHHCC
QPAAELQDRAFLRAFNRQVERFGLVPKP
CCHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA