| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is yceA [C]
Identifier: 148241893
GI number: 148241893
Start: 725084
End: 726040
Strand: Direct
Name: yceA [C]
Synonym: SynRCC307_0794
Alternate gene names: 148241893
Gene position: 725084-726040 (Clockwise)
Preceding gene: 148241892
Following gene: 148241894
Centisome position: 32.59
GC content: 62.59
Gene sequence:
>957_bases ATGGCCCCGAACGGTCCATGGCTGGTGGCGGCGTTTTATCGCTTTGCGCCGTTGCAGAACTTGGACAACCTGCGCGCGGA GCTGCAACAGCTTGGCGGGGATCAGGGGCTGCTTGGCACGGTGCTGCTCGCCGCTGAAGGGGTCAATGGCACGGTTTGCG GCTCGGTGGAAGCAGTCAGCGCACTGCTCGATCGCTTGCGGCTAGAGGCAGGCTTCGAAGCCCTTCAAGAGAAACGCAGC TGGTGTGATCAGCCCTGCTTTTTGCGCTTCAAGGTGCGCTTGAAGGCGGAGATCGTCACCATGGGCCACCAAGGCGTGGA CCCCACTGAACAGGTGGGGACGTATGTGCCCCCAGAGCAGTGGAACGACTTGATCGCCGATCCCACCACCTTGGTGATCG ATACGCGCAACGGCTACGAGGTGGGGGTGGGCAGCTTTGCCGGAGCAGTGGATCCACAGACCGAGAGCTTCCGCGAGTTC CCCGCTTGGGCCGCTGAGGAATTGCGCCCCCTGATGCAAGCCCGCGGTGCCAAGAAGCTGGCCCTGTTTTGCACCGGCGG GATTCGCTGCGAGAAGGCCACCGCCCATCTGCTGCAGCAGGGGTTTGATCAGGTGCATCACCTGGAGGGCGGCATCCTGC GCTACCTCGAAACGGTGCCGCCAGAGCAAAGCCGCTGGCAGGGTGAGTGTTTTGTGTTTGACCGGCGTGTGGCCCTCAAC CACCAGTTGGAGCCGGGTGATCACAGGCTTTGCCACGCCTGCGGTTTGCCGCTGACGCCGCAGCAGTGTGAGCTGCCCAG CTATGTCAAAGGAGTGAGCTGCTTGCACTGCATCGAGCGCTTCAGCGATGCCGACCGCAAACGCTTCGCCCAGCGGCAGC AGCAGCTCGAGAGGGGGGATATCTGGAGGCTAGAAAGGGGCGATGAGTGCCCAAGCATTGATGAGCCAACGGTTTGA
Upstream 100 bases:
>100_bases ACAGCTTGCTCACCACCAGCAACCCAGCGGTTCAGGCTGATCAGGCGCTTCTGGCTGCAGCTGGAGTGAGCAGCAGTTTG GAGGGCGTGGCAGCGGCCTG
Downstream 100 bases:
>100_bases AACGCTTCAGCTGCACGCTGGCCAGCAGGCGGATCCCACCACCAATGCCCGTGCGGTTCCGATTTATCAAACCTCCTCCT ACGTCTTCAATGACGCCGAG
Product: sulfurtransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MAPNGPWLVAAFYRFAPLQNLDNLRAELQQLGGDQGLLGTVLLAAEGVNGTVCGSVEAVSALLDRLRLEAGFEALQEKRS WCDQPCFLRFKVRLKAEIVTMGHQGVDPTEQVGTYVPPEQWNDLIADPTTLVIDTRNGYEVGVGSFAGAVDPQTESFREF PAWAAEELRPLMQARGAKKLALFCTGGIRCEKATAHLLQQGFDQVHHLEGGILRYLETVPPEQSRWQGECFVFDRRVALN HQLEPGDHRLCHACGLPLTPQQCELPSYVKGVSCLHCIERFSDADRKRFAQRQQQLERGDIWRLERGDECPSIDEPTV
Sequences:
>Translated_318_residues MAPNGPWLVAAFYRFAPLQNLDNLRAELQQLGGDQGLLGTVLLAAEGVNGTVCGSVEAVSALLDRLRLEAGFEALQEKRS WCDQPCFLRFKVRLKAEIVTMGHQGVDPTEQVGTYVPPEQWNDLIADPTTLVIDTRNGYEVGVGSFAGAVDPQTESFREF PAWAAEELRPLMQARGAKKLALFCTGGIRCEKATAHLLQQGFDQVHHLEGGILRYLETVPPEQSRWQGECFVFDRRVALN HQLEPGDHRLCHACGLPLTPQQCELPSYVKGVSCLHCIERFSDADRKRFAQRQQQLERGDIWRLERGDECPSIDEPTV >Mature_317_residues APNGPWLVAAFYRFAPLQNLDNLRAELQQLGGDQGLLGTVLLAAEGVNGTVCGSVEAVSALLDRLRLEAGFEALQEKRSW CDQPCFLRFKVRLKAEIVTMGHQGVDPTEQVGTYVPPEQWNDLIADPTTLVIDTRNGYEVGVGSFAGAVDPQTESFREFP AWAAEELRPLMQARGAKKLALFCTGGIRCEKATAHLLQQGFDQVHHLEGGILRYLETVPPEQSRWQGECFVFDRRVALNH QLEPGDHRLCHACGLPLTPQQCELPSYVKGVSCLHCIERFSDADRKRFAQRQQQLERGDIWRLERGDECPSIDEPTV
Specific function: Unknown. [C]
COG id: COG1054
COG function: function code R; Predicted sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain [H]
Homologues:
Organism=Homo sapiens, GI111038120, Length=242, Percent_Identity=30.9917355371901, Blast_Score=103, Evalue=3e-22, Organism=Escherichia coli, GI1787294, Length=266, Percent_Identity=34.5864661654135, Blast_Score=129, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 - InterPro: IPR020936 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: NA
Molecular weight: Translated: 35495; Mature: 35363
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPNGPWLVAAFYRFAPLQNLDNLRAELQQLGGDQGLLGTVLLAAEGVNGTVCGSVEAVS CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHH ALLDRLRLEAGFEALQEKRSWCDQPCFLRFKVRLKAEIVTMGHQGVDPTEQVGTYVPPEQ HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEECCCCCCHHHHCCCCCCHHH WNDLIADPTTLVIDTRNGYEVGVGSFAGAVDPQTESFREFPAWAAEELRPLMQARGAKKL HHHHHCCCEEEEEECCCCCEECCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCEE ALFCTGGIRCEKATAHLLQQGFDQVHHLEGGILRYLETVPPEQSRWQGECFVFDRRVALN EEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHC HQLEPGDHRLCHACGLPLTPQQCELPSYVKGVSCLHCIERFSDADRKRFAQRQQQLERGD CCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC IWRLERGDECPSIDEPTV EEEECCCCCCCCCCCCCC >Mature Secondary Structure APNGPWLVAAFYRFAPLQNLDNLRAELQQLGGDQGLLGTVLLAAEGVNGTVCGSVEAVS CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHH ALLDRLRLEAGFEALQEKRSWCDQPCFLRFKVRLKAEIVTMGHQGVDPTEQVGTYVPPEQ HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEECCCCCCHHHHCCCCCCHHH WNDLIADPTTLVIDTRNGYEVGVGSFAGAVDPQTESFREFPAWAAEELRPLMQARGAKKL HHHHHCCCEEEEEECCCCCEECCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCEE ALFCTGGIRCEKATAHLLQQGFDQVHHLEGGILRYLETVPPEQSRWQGECFVFDRRVALN EEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHC HQLEPGDHRLCHACGLPLTPQQCELPSYVKGVSCLHCIERFSDADRKRFAQRQQQLERGD CCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC IWRLERGDECPSIDEPTV EEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA