| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241297
Identifier: 148241297
GI number: 148241297
Start: 200385
End: 201086
Strand: Direct
Name: 148241297
Synonym: SynRCC307_0198
Alternate gene names: NA
Gene position: 200385-201086 (Clockwise)
Preceding gene: 148241296
Following gene: 148241298
Centisome position: 9.01
GC content: 38.32
Gene sequence:
>702_bases ATGGCTGGCATTCGCTTAAAGCTAAAGCGCTTATTTCTTGACGAAATTAATTCACATTTAAATCCTCAAATACCACCTAT TCTTATAGCTTCTATGGGGAGATCTGGTTCTACTTTGTTATTCGATGCAGTCGCAGAAGCTCTTATAAGTACAAGAAATC TACTCATACCTCGCGCATTTGCTAAAGCACTCATTCGTCGTGGAGGAGCATGGAATCTTCGCACAATCAGATTCTTTCCA GGTGTCGTCTACAAGACCCATGGTTTTCCTGATCATTTACCAGAAAATTTCACCGGTAAAATTATTTTTATTTATGGTGA TCCAATCGACGCTGCCTTGTCTATTATTAACTGTAGAGATAAGCTTGGTGAGATGTGGTTTTCCTCTCATTTAACTCATT TATTTGCCAAGGAATCTTTTTTGTCTGATGATAATGATCCATTTCAGTTTTCCCGTCAAATACAAAGTTGGATGAATTAT CAAGGTAGTCCTGTATTGGTCCTGCGTTATGAAACATTATGGGATTACACAAATAAAATTTCCGAATTCTTAGGTTTTAA TATTAGTCTTCCCCCACGCAAGGCGCGTTCAAATATCTCAGAGTCAGAGCTAGATGTTGCCAGATATATTGATGCATATA CACCTCTTCGAGCGCAAATGCTTGACCTTCCAGACGTTTATATTTATACGCCCTTGCAATGA
Upstream 100 bases:
>100_bases TCAGATCATTCAGTTCAGCAATGTTTTTACATGTTCGCCTGGATGTACGTGCTATAATAATTTGCTAAATATTTCACATC CTTTACAGAAAGTTTATTAA
Downstream 100 bases:
>100_bases ATATATTTTCATCACTGTTGCTTTTTGCTTATTTATTTCTTCCGAACTCACCTACACAATCGGTTTCCTCAACTCCTCCA GTAAAGTTTGGGATATGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MAGIRLKLKRLFLDEINSHLNPQIPPILIASMGRSGSTLLFDAVAEALISTRNLLIPRAFAKALIRRGGAWNLRTIRFFP GVVYKTHGFPDHLPENFTGKIIFIYGDPIDAALSIINCRDKLGEMWFSSHLTHLFAKESFLSDDNDPFQFSRQIQSWMNY QGSPVLVLRYETLWDYTNKISEFLGFNISLPPRKARSNISESELDVARYIDAYTPLRAQMLDLPDVYIYTPLQ
Sequences:
>Translated_233_residues MAGIRLKLKRLFLDEINSHLNPQIPPILIASMGRSGSTLLFDAVAEALISTRNLLIPRAFAKALIRRGGAWNLRTIRFFP GVVYKTHGFPDHLPENFTGKIIFIYGDPIDAALSIINCRDKLGEMWFSSHLTHLFAKESFLSDDNDPFQFSRQIQSWMNY QGSPVLVLRYETLWDYTNKISEFLGFNISLPPRKARSNISESELDVARYIDAYTPLRAQMLDLPDVYIYTPLQ >Mature_232_residues AGIRLKLKRLFLDEINSHLNPQIPPILIASMGRSGSTLLFDAVAEALISTRNLLIPRAFAKALIRRGGAWNLRTIRFFPG VVYKTHGFPDHLPENFTGKIIFIYGDPIDAALSIINCRDKLGEMWFSSHLTHLFAKESFLSDDNDPFQFSRQIQSWMNYQ GSPVLVLRYETLWDYTNKISEFLGFNISLPPRKARSNISESELDVARYIDAYTPLRAQMLDLPDVYIYTPLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26671; Mature: 26540
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGIRLKLKRLFLDEINSHLNPQIPPILIASMGRSGSTLLFDAVAEALISTRNLLIPRAF CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH AKALIRRGGAWNLRTIRFFPGVVYKTHGFPDHLPENFTGKIIFIYGDPIDAALSIINCRD HHHHHHCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHH KLGEMWFSSHLTHLFAKESFLSDDNDPFQFSRQIQSWMNYQGSPVLVLRYETLWDYTNKI HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHH SEFLGFNISLPPRKARSNISESELDVARYIDAYTPLRAQMLDLPDVYIYTPLQ HHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCHHHHHCCCCCEEEECCCC >Mature Secondary Structure AGIRLKLKRLFLDEINSHLNPQIPPILIASMGRSGSTLLFDAVAEALISTRNLLIPRAF CCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH AKALIRRGGAWNLRTIRFFPGVVYKTHGFPDHLPENFTGKIIFIYGDPIDAALSIINCRD HHHHHHCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHH KLGEMWFSSHLTHLFAKESFLSDDNDPFQFSRQIQSWMNYQGSPVLVLRYETLWDYTNKI HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHH SEFLGFNISLPPRKARSNISESELDVARYIDAYTPLRAQMLDLPDVYIYTPLQ HHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCHHHHHCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA