| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
Click here to switch to the map view.
The map label for this gene is 148241296
Identifier: 148241296
GI number: 148241296
Start: 198371
End: 199279
Strand: Direct
Name: 148241296
Synonym: SynRCC307_0197
Alternate gene names: NA
Gene position: 198371-199279 (Clockwise)
Preceding gene: 148241295
Following gene: 148241297
Centisome position: 8.92
GC content: 33.33
Gene sequence:
>909_bases ATGCTCTACTCCCCAGTTTCAATTACTGTATATAATAGATTTTTCCATTTTAAAAAGTGTATTGAGAATTTAAAAAAAAA TGTTCTTGCCGATAAGACAACTCTATTTATTTTCTCCGATGCACCTCGTTTAGGTGATGAAGAAAATGTTCAAAAAGTTA GAGATTATGCTAAAAATATTGATGGATTTAAAGATGTACGACTACATTTTCAAACAACTAATAATTTTGCAAAAAATGGA TACGAATCACGACGAATACCTATTTCTGAATTCGGTTCAGTAATCAGAATGGAGGATGATATTTTAACTGCACCGGGTTT TTTAACTTTTCTCAATCATGCCTACCAGTTTTATCAGAATAATCCTTCTATTGTAAATATAACTGGCTATTGTCCGCCTC TTAGAATAAACTCTGACTATAGCAAAGATTACTTTATTTTAAAAAGACCTTGTGCTTGGGGTTGGTTGTACGATCAAGAA ATATTAGATATTGTTGAGTCACAAATAGATATTGGCGAACTCAACTCATTTATTAAAAATAGTAGGCATAAAATAACGGA GTGTGGAGAAGATGTTTTGCGTATGGCATTTAAAGATGCAACTAAGCAAATTCAAGCAGGTGATGTTAGATCGATGTTTT ATCAAATAAAGTATAATAAATATACTATATATCCTCGTTATTCTCTTGTCCAAAATATCGGCCATGATGGATCAGGCCTC CATTGTGGTAGTACTAAGAAATTTATGCATGATATTCTATGGGATAAGGTGGACAACTTCGACTTTGAGCTTTTGCCCAA GCCAGATCCTGAGATTGTCAGGGCAAATTATCAGTTTCGATCCAGGCCTTTATCTACAGCTATTAAGATTAAGTTGAAAG ATACAATTCGGGCATGGCTTCAATCTTGA
Upstream 100 bases:
>100_bases AGAAAATTTTATAGAGTAAGCCTCTCAGCTTACCATTGGTCGGTAAAATATCTTCGCCGATAGTTCACTGCTTCATTTTC TTTCTAGCTCACTAATTTAA
Downstream 100 bases:
>100_bases TTCTCATGCTAACTACTTTGTCGCCAATTTAGAAGTTCACGATCTTTTATCCCTAGCGCTTACTCATGTTTAAAAAAATT TCTAGCCGGGTTTTCCGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Sugar Transferase; FkbM Family Methyltransferase
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MLYSPVSITVYNRFFHFKKCIENLKKNVLADKTTLFIFSDAPRLGDEENVQKVRDYAKNIDGFKDVRLHFQTTNNFAKNG YESRRIPISEFGSVIRMEDDILTAPGFLTFLNHAYQFYQNNPSIVNITGYCPPLRINSDYSKDYFILKRPCAWGWLYDQE ILDIVESQIDIGELNSFIKNSRHKITECGEDVLRMAFKDATKQIQAGDVRSMFYQIKYNKYTIYPRYSLVQNIGHDGSGL HCGSTKKFMHDILWDKVDNFDFELLPKPDPEIVRANYQFRSRPLSTAIKIKLKDTIRAWLQS
Sequences:
>Translated_302_residues MLYSPVSITVYNRFFHFKKCIENLKKNVLADKTTLFIFSDAPRLGDEENVQKVRDYAKNIDGFKDVRLHFQTTNNFAKNG YESRRIPISEFGSVIRMEDDILTAPGFLTFLNHAYQFYQNNPSIVNITGYCPPLRINSDYSKDYFILKRPCAWGWLYDQE ILDIVESQIDIGELNSFIKNSRHKITECGEDVLRMAFKDATKQIQAGDVRSMFYQIKYNKYTIYPRYSLVQNIGHDGSGL HCGSTKKFMHDILWDKVDNFDFELLPKPDPEIVRANYQFRSRPLSTAIKIKLKDTIRAWLQS >Mature_302_residues MLYSPVSITVYNRFFHFKKCIENLKKNVLADKTTLFIFSDAPRLGDEENVQKVRDYAKNIDGFKDVRLHFQTTNNFAKNG YESRRIPISEFGSVIRMEDDILTAPGFLTFLNHAYQFYQNNPSIVNITGYCPPLRINSDYSKDYFILKRPCAWGWLYDQE ILDIVESQIDIGELNSFIKNSRHKITECGEDVLRMAFKDATKQIQAGDVRSMFYQIKYNKYTIYPRYSLVQNIGHDGSGL HCGSTKKFMHDILWDKVDNFDFELLPKPDPEIVRANYQFRSRPLSTAIKIKLKDTIRAWLQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35313; Mature: 35313
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYSPVSITVYNRFFHFKKCIENLKKNVLADKTTLFIFSDAPRLGDEENVQKVRDYAKNI CCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHCC DGFKDVRLHFQTTNNFAKNGYESRRIPISEFGSVIRMEDDILTAPGFLTFLNHAYQFYQN CCCEEEEEEEEECCCHHHCCCCCCCCCHHHHCCEEEECCCEECCCHHHHHHHHHHHHHCC NPSIVNITGYCPPLRINSDYSKDYFILKRPCAWGWLYDQEILDIVESQIDIGELNSFIKN CCCEEEEECCCCCEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHC SRHKITECGEDVLRMAFKDATKQIQAGDVRSMFYQIKYNKYTIYPRYSLVQNIGHDGSGL CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEEEECEEEEEECHHHHHHCCCCCCCC HCGSTKKFMHDILWDKVDNFDFELLPKPDPEIVRANYQFRSRPLSTAIKIKLKDTIRAWL CCCCHHHHHHHHHHHHCCCCCEEECCCCCHHHEECCCHHHCCCCCEEEEEEEHHHHHHHH QS CC >Mature Secondary Structure MLYSPVSITVYNRFFHFKKCIENLKKNVLADKTTLFIFSDAPRLGDEENVQKVRDYAKNI CCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHCC DGFKDVRLHFQTTNNFAKNGYESRRIPISEFGSVIRMEDDILTAPGFLTFLNHAYQFYQN CCCEEEEEEEEECCCHHHCCCCCCCCCHHHHCCEEEECCCEECCCHHHHHHHHHHHHHCC NPSIVNITGYCPPLRINSDYSKDYFILKRPCAWGWLYDQEILDIVESQIDIGELNSFIKN CCCEEEEECCCCCEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHC SRHKITECGEDVLRMAFKDATKQIQAGDVRSMFYQIKYNKYTIYPRYSLVQNIGHDGSGL CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEEEECEEEEEECHHHHHHCCCCCCCC HCGSTKKFMHDILWDKVDNFDFELLPKPDPEIVRANYQFRSRPLSTAIKIKLKDTIRAWL CCCCHHHHHHHHHHHHCCCCCEEECCCCCHHHEECCCHHHCCCCCEEEEEEEHHHHHHHH QS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA