Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148241298

Identifier: 148241298

GI number: 148241298

Start: 201083

End: 201916

Strand: Direct

Name: 148241298

Synonym: SynRCC307_0199

Alternate gene names: NA

Gene position: 201083-201916 (Clockwise)

Preceding gene: 148241297

Following gene: 148241299

Centisome position: 9.04

GC content: 35.49

Gene sequence:

>834_bases
ATGAATATATTTTCATCACTGTTGCTTTTTGCTTATTTATTTCTTCCGAACTCACCTACACAATCGGTTTCCTCAACTCC
TCCAGTAAAGTTTGGGATATGGGGTGTAGATAAGATTAGCCCCTCTAAAGAAAAGGATTTATTTTGTCAATTGAAAAAAG
ATAATTTTGACTTTATTCAGTCATACTCTTCTTTCAAGACTCATAGCTTTAAACGTTTAGAGGGTTTATTGGAAAATATT
CAAGAATGTCGTATTAATGCCATCTTAGCCATCCAACCTTTTAGGAAGAATATTTTAGTGAACCCTGTTTTTAATTCAAA
ACTGCAATTACTATCGCTCTATTCTCGCAATGTCCTTGTTCAAATTGCAGATGAACCTCGCAGCAAAAATCAAGTGAGAT
TCCTTCCGAAAATCTGTCGGCATATAGAGAAATTTTCCCTTGATGCTCATTTGCAAGAAGGTGTCAATCCGACAATTCTA
CAGTGTGTTACTCAAAATGGCTTGCATTCACACCGCAAGCGGCCCAATATTAACCCTAGTCTCAAACAAATAGCTCTAAA
TTCACACAAACTGAGAAGGAGCCGAAAAGATATTGTTTACACGATGCGAATGTTTAATTCTGAGAATCAAAACAACTTCG
TTAATGTTACTTATGAGGACGCAAAGAACGAGCTTTGCTATGTTCTTCAAAACATCAAGCCTAATAAGATTGCTTTTTAT
ACCTATAATAAGCGCTATAAAGGTGCAGGCATGATGCAAGATCCAGGCCTTTATAAAATAGCCACTCAGCTTGTGCTAAA
ATATAAAAATAACAAACTTATTTGCCAGAAATGA

Upstream 100 bases:

>100_bases
CAGAGTCAGAGCTAGATGTTGCCAGATATATTGATGCATATACACCTCTTCGAGCGCAAATGCTTGACCTTCCAGACGTT
TATATTTATACGCCCTTGCA

Downstream 100 bases:

>100_bases
TTGTTTTACAGCATTTAAGTATTGTTTTTGTTCATATACCAAAAAACGCTGGTTCTTACGTCAAGAGATCCCTTAAGTCA
AATAATAATGTTCTACGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MNIFSSLLLFAYLFLPNSPTQSVSSTPPVKFGIWGVDKISPSKEKDLFCQLKKDNFDFIQSYSSFKTHSFKRLEGLLENI
QECRINAILAIQPFRKNILVNPVFNSKLQLLSLYSRNVLVQIADEPRSKNQVRFLPKICRHIEKFSLDAHLQEGVNPTIL
QCVTQNGLHSHRKRPNINPSLKQIALNSHKLRRSRKDIVYTMRMFNSENQNNFVNVTYEDAKNELCYVLQNIKPNKIAFY
TYNKRYKGAGMMQDPGLYKIATQLVLKYKNNKLICQK

Sequences:

>Translated_277_residues
MNIFSSLLLFAYLFLPNSPTQSVSSTPPVKFGIWGVDKISPSKEKDLFCQLKKDNFDFIQSYSSFKTHSFKRLEGLLENI
QECRINAILAIQPFRKNILVNPVFNSKLQLLSLYSRNVLVQIADEPRSKNQVRFLPKICRHIEKFSLDAHLQEGVNPTIL
QCVTQNGLHSHRKRPNINPSLKQIALNSHKLRRSRKDIVYTMRMFNSENQNNFVNVTYEDAKNELCYVLQNIKPNKIAFY
TYNKRYKGAGMMQDPGLYKIATQLVLKYKNNKLICQK
>Mature_277_residues
MNIFSSLLLFAYLFLPNSPTQSVSSTPPVKFGIWGVDKISPSKEKDLFCQLKKDNFDFIQSYSSFKTHSFKRLEGLLENI
QECRINAILAIQPFRKNILVNPVFNSKLQLLSLYSRNVLVQIADEPRSKNQVRFLPKICRHIEKFSLDAHLQEGVNPTIL
QCVTQNGLHSHRKRPNINPSLKQIALNSHKLRRSRKDIVYTMRMFNSENQNNFVNVTYEDAKNELCYVLQNIKPNKIAFY
TYNKRYKGAGMMQDPGLYKIATQLVLKYKNNKLICQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32182; Mature: 32182

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIFSSLLLFAYLFLPNSPTQSVSSTPPVKFGIWGVDKISPSKEKDLFCQLKKDNFDFIQ
CCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCHHHHH
SYSSFKTHSFKRLEGLLENIQECRINAILAIQPFRKNILVNPVFNSKLQLLSLYSRNVLV
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCHHHHHHHHHCCCEEE
QIADEPRSKNQVRFLPKICRHIEKFSLDAHLQEGVNPTILQCVTQNGLHSHRKRPNINPS
EECCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHCCHHHHHCCCCCCHH
LKQIALNSHKLRRSRKDIVYTMRMFNSENQNNFVNVTYEDAKNELCYVLQNIKPNKIAFY
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHCCCCCEEEEE
TYNKRYKGAGMMQDPGLYKIATQLVLKYKNNKLICQK
EECCEECCCCCCCCCCHHHHHHHHHHHCCCCEEEECC
>Mature Secondary Structure
MNIFSSLLLFAYLFLPNSPTQSVSSTPPVKFGIWGVDKISPSKEKDLFCQLKKDNFDFIQ
CCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCHHHHH
SYSSFKTHSFKRLEGLLENIQECRINAILAIQPFRKNILVNPVFNSKLQLLSLYSRNVLV
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCHHHHHHHHHCCCEEE
QIADEPRSKNQVRFLPKICRHIEKFSLDAHLQEGVNPTILQCVTQNGLHSHRKRPNINPS
EECCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHCCHHHHHCCCCCCHH
LKQIALNSHKLRRSRKDIVYTMRMFNSENQNNFVNVTYEDAKNELCYVLQNIKPNKIAFY
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHCCCCCEEEEE
TYNKRYKGAGMMQDPGLYKIATQLVLKYKNNKLICQK
EECCEECCCCCCCCCCHHHHHHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA